CuGenDBv2

Gene ID	Carg19769
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transport and Golgi organization protein 2 homolog
Genome location	Carg_Chr02:1084018..1085787
RNA-Seq Expression	Carg19769
Synteny	Carg19769
Gene Ontology terms	NA
InterPro domains	IPR008551 - Transport and Golgi organisation protein 2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6604975.1 Transport and Golgi organization protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]

4.9e-75

99.31

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF
        LGRYGTGSISALSVKNSGEASFFEKHLEND WIDSSFTFQIENF
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF

KAG7035009.1 hypothetical protein SDJN02_01802 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-75

100

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF
        LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF

XP_022947387.1 transport and Golgi organization protein 2 homolog [Cucurbita moschata]

2.4e-74

98.61

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLM NTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF
        LGRYGTGSISALSVKNSGEASFFEKHLEND WIDSSFTFQIENF
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF

XP_022971076.1 transport and Golgi organization protein 2 homolog [Cucurbita maxima]

3.2e-74

98.61

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF
        LGRYGTGSISALSVKNSGEASFFEKHLEND WIDSS TFQIENF
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF

XP_023532494.1 transport and Golgi organization protein 2 homolog [Cucurbita pepo subsp. pepo]

1.0e-72

97.2

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIEN
        LGRYGTGSISAL VKNSGE+SFFEKHLEND WIDSSFTF IEN
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIEN

TrEMBL top hits

e value

%identity

Alignment

A0A438JT54 Transport and Golgi organization 2-like

1.0e-41

61.27

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        M YITNRP   ++  V EV PGIHVL+NA LDSPWPKA RL  + +E ++K G+ E+P +EMVEKLM NTIKDD  +LP IY P RE+Q SSIFVDTD+ 
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIE
        LGRYGT S S++ V+ SGE +F+EKHLEN+TW +++ T+QIE
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIE

A0A6J1CII2 transport and Golgi organization 2 homolog

2.1e-63

85.31

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        MFYITNRP N+S SLVTEV PGIHVLTNAQLDSPWPKA RLDQS R+ V+KNGDRELP +EMVEKLMTNTIKDD SLLPGIYSPRREYQYSSIFVDTD+E
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIEN
        LGRYGTGSISALSVKNSGEA+F +++L+ND WID+SFTFQIEN
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIEN

A0A6J1G6B2 transport and Golgi organization protein 2 homolog

1.2e-74

98.61

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLM NTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF
        LGRYGTGSISALSVKNSGEASFFEKHLEND WIDSSFTFQIENF
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF

A0A6J1I2B1 transport and Golgi organization protein 2 homolog

1.5e-74

98.61

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF
        LGRYGTGSISALSVKNSGEASFFEKHLEND WIDSS TFQIENF
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF

D7U4R9 Uncharacterized protein

1.0e-41

61.27

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        M YITNRP   ++  V EV PGIHVL+NA LDSPWPKA RL  + +E ++K G+ E+P +EMVEKLM NTIKDD  +LP IY P RE+Q SSIFVDTD+ 
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIE
        LGRYGT S S++ V+ SGE +F+EKHLEN+TW +++ T+QIE
Subjt:  LGRYGTGSISALSVKNSGEASFFEKHLENDTWIDSSFTFQIE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G38260.1 Protein of unknown function (DUF833)

9.6e-37

52.7

Show/hide

Query:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE
        M YITNRP  + D LVT+V PGIHVL+NA LDSPWPK LRL +  ++ + +NG  E PVK MVE++MTNT+KD+ + LP +++P  EY  SSIFVD    
Subjt:  MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSE

Query:  LGRYGTGSISALSVKN------SGEASFFEKHL-ENDTWIDSSFTFQI
         GRYGT SISA+ VK+       GE  F+E+HL E D+W + +  F I
Subjt:  LGRYGTGSISALSVKN------SGEASFFEKHL-ENDTWIDSSFTFQI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTTTATATCACCAACAGACCAATTAACAACAGCGACAGCCTTGTCACTGAGGTCCCCCCCGGCATTCATGTCCTCACAAATGCACAACTCGACTCTCCATGGCCCAA
GGCACTGCGACTGGACCAGAGTTTGAGAGAGTTCGTGAACAAAAATGGCGACAGGGAACTTCCAGTAAAAGAGATGGTTGAAAAGCTAATGACCAACACAATTAAAGACG
ATGTGAGCTTGCTACCCGGCATCTATTCTCCTCGAAGGGAATATCAATACAGTTCCATATTCGTCGATACAGATTCCGAACTGGGACGTTATGGAACTGGAAGCATATCT
GCTTTGTCTGTGAAGAACAGTGGGGAAGCTTCATTCTTTGAGAAGCATTTGGAGAACGATACATGGATTGACAGCAGTTTTACCTTCCAGATTGAGAACTTCTGA

mRNA sequence

Show/hide mRNA sequence

CAATCCATCCCCTTGGGGCCAGTGTCCTTGCCGGAATTGTCAAGAGAGATTGAACCGGCACTGCACTTTCTAACTTTCAAACCAACCAAAATCTCCTAAGCTAGTAATAG
AATTCTAGAACTTAAAGAACACACCTAAGAGCTCTATGAGATGATTATCTCATACAAGTAAGAGGGATTGCAAAAAGACACCAAATGACTTCAGAAACCACCCTTCGTGC
CTTTGGAACTTATCCACTTTACAAACAGTAACATCTGCGAGTCCCACCGTTGTCTTTTCAGTGAAATGCAAACAGAAAGTTGACGTTGGCAAAGAATTAATAGCATTGGA
GTCATAGAATAATGACTCTCCTGTGTTTTTGTCTTAACAGAGCAAGAAAACTCCCCTCGACTTCGCCAAAGAAGTCGAAAAGGAAGCACACCAGTACAACGGTTTCAACT
TGATAATCGCCGACATTCCCTCGAAAACCATGTTTTATATCACCAACAGACCAATTAACAACAGCGACAGCCTTGTCACTGAGGTCCCCCCCGGCATTCATGTCCTCACA
AATGCACAACTCGACTCTCCATGGCCCAAGGCACTGCGACTGGACCAGAGTTTGAGAGAGTTCGTGAACAAAAATGGCGACAGGGAACTTCCAGTAAAAGAGATGGTTGA
AAAGCTAATGACCAACACAATTAAAGACGATGTGAGCTTGCTACCCGGCATCTATTCTCCTCGAAGGGAATATCAATACAGTTCCATATTCGTCGATACAGATTCCGAAC
TGGGACGTTATGGAACTGGAAGCATATCTGCTTTGTCTGTGAAGAACAGTGGGGAAGCTTCATTCTTTGAGAAGCATTTGGAGAACGATACATGGATTGACAGCAGTTTT
ACCTTCCAGATTGAGAACTTCTGAATCCTTTTCGAGAAATTGGTTTCCAAGTTTCACGCCGGGTTCGGCCACTGAACTAGCACACGAGGGGGTTGCAAGCTCTGACTCCG
CCATCGCCTGCCATGGGTGTTTTCCTTCGGTTCTTCGTCGTTAACCGATTTGTTTCCATTCCATACGTTTTGCTTCTGGCTGGCACGTGCCTATGCACGTGACTACCTCC
CTCTCCATGGTTGTACTTAGTGTCGAAGATCCTCCCTCTGGTTAGTTTTCAAATCGTTGGACTATTTAGTACCTTCAATTCGAGTCTTCCTTCTCGAGTGTTTCTTGGTT
GTGAATATCTGAATAGGACGAATGGTTTGTTCACGCTTGTAAATCAAATTGAAAAGCATAGAAATCAGGTCACAAACTAATTATTATTATTATTTTCTTCCTAATGTCTA
CGTTTTTTTTTTAAAAAA

Protein sequence

Show/hide protein sequence

MFYITNRPINNSDSLVTEVPPGIHVLTNAQLDSPWPKALRLDQSLREFVNKNGDRELPVKEMVEKLMTNTIKDDVSLLPGIYSPRREYQYSSIFVDTDSELGRYGTGSIS
ALSVKNSGEASFFEKHLENDTWIDSSFTFQIENF

Carg19769 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome