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Carg19776 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19776
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein FAR1-RELATED SEQUENCE 9-like
Genome locationCarg_Chr02:1129230..1129857
RNA-Seq ExpressionCarg19776
SyntenyCarg19776
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604982.1 Protein FAR1-RELATED SEQUENCE 9, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0576.32Show/hide
Query:  LKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI
        LK  +R      NRGPRASNGDIMANGVVDQWLQQKRI
Subjt:  LKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI

KAG7035016.1 hypothetical protein SDJN02_01809, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-32100Show/hide
Query:  MIQEPWQVVKFGEDHKAHATYISSFPSQYVLKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI
        MIQEPWQVVKFGEDHKAHATYISSFPSQYVLKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI
Subjt:  MIQEPWQVVKFGEDHKAHATYISSFPSQYVLKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI

XP_022971143.1 protein FAR1-RELATED SEQUENCE 9-like [Cucurbita maxima]8.1e-0468.42Show/hide
Query:  LKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI
        LK  +R      NRGPRA NGDI+ANGVVDQWLQQK+I
Subjt:  LKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI

XP_022985850.1 protein FAR1-RELATED SEQUENCE 9-like [Cucurbita maxima]8.1e-0429.93Show/hide
Query:  WQVVKFGEDHKAHATYISSF---------------------------------PSQYVLKRWTRNDRNGD------------------------------
        ++V KFGEDHKAHA   +SF                                 PSQYVLKRWTRN RNGD                              
Subjt:  WQVVKFGEDHKAHATYISSF---------------------------------PSQYVLKRWTRNDRNGD------------------------------

Query:  ------------------------------NRGPRASNGDIMANGVV
                                      NRGP A+NGDIMANGVV
Subjt:  ------------------------------NRGPRASNGDIMANGVV

XP_023534289.1 protein FAR1-RELATED SEQUENCE 9-like [Cucurbita pepo subsp. pepo]2.5e-0576.32Show/hide
Query:  LKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI
        LK  +R      NRGPRASNGDIMANGVVDQWLQQKRI
Subjt:  LKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI

TrEMBL top hitse value%identityAlignment
A0A6J1I5Z3 protein FAR1-RELATED SEQUENCE 9-like3.9e-0468.42Show/hide
Query:  LKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI
        LK  +R      NRGPRA NGDI+ANGVVDQWLQQK+I
Subjt:  LKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI

A0A6J1J9D1 Protein FAR1-RELATED SEQUENCE3.9e-0429.93Show/hide
Query:  WQVVKFGEDHKAHATYISSF---------------------------------PSQYVLKRWTRNDRNGD------------------------------
        ++V KFGEDHKAHA   +SF                                 PSQYVLKRWTRN RNGD                              
Subjt:  WQVVKFGEDHKAHATYISSF---------------------------------PSQYVLKRWTRNDRNGD------------------------------

Query:  ------------------------------NRGPRASNGDIMANGVV
                                      NRGP A+NGDIMANGVV
Subjt:  ------------------------------NRGPRASNGDIMANGVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACAGGAGCCGTGGCAAGTAGTGAAATTTGGGGAAGATCATAAAGCACATGCGACATATATTAGTAGTTTTCCTTCTCAATATGTATTGAAACGGTGGACTAGAAA
TGACAGAAATGGAGATAATCGTGGCCCTAGAGCTTCGAATGGTGATATCATGGCCAATGGAGTTGTTGATCAATGGTTGCAACAGAAGAGGATC
mRNA sequenceShow/hide mRNA sequence
ATGATACAGGAGCCGTGGCAAGTAGTGAAATTTGGGGAAGATCATAAAGCACATGCGACATATATTAGTAGTTTTCCTTCTCAATATGTATTGAAACGGTGGACTAGAAA
TGACAGAAATGGAGATAATCGTGGCCCTAGAGCTTCGAATGGTGATATCATGGCCAATGGAGTTGTTGATCAATGGTTGCAACAGAAGAGGATC
Protein sequenceShow/hide protein sequence
MIQEPWQVVKFGEDHKAHATYISSFPSQYVLKRWTRNDRNGDNRGPRASNGDIMANGVVDQWLQQKRI