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Carg19799 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19799
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein XAP5 CIRCADIAN TIMEKEEPER
Genome locationCarg_Chr02:1274940..1278704
RNA-Seq ExpressionCarg19799
SyntenyCarg19799
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0009637 - response to blue light (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0010099 - regulation of photomorphogenesis (biological process)
GO:0010114 - response to red light (biological process)
GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007005 - XAP5 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035037.1 Protein XAP5 CIRCADIAN TIMEKEEPER [Cucurbita argyrosperma subsp. argyrosperma]7.7e-43100Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
XP_022947477.1 protein XAP5 CIRCADIAN TIMEKEEPER-like isoform X1 [Cucurbita moschata]7.7e-43100Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
XP_022947478.1 protein XAP5 CIRCADIAN TIMEKEEPER-like isoform X2 [Cucurbita moschata]7.7e-43100Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
XP_023007541.1 protein XAP5 CIRCADIAN TIMEKEEPER-like isoform X1 [Cucurbita maxima]1.7e-4299.01Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEK+VNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
XP_023533233.1 protein XAP5 CIRCADIAN TIMEKEEPER-like [Cucurbita pepo subsp. pepo]7.7e-43100Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
TrEMBL top hitse value%identityAlignment
A0A6J1G6K1 protein XAP5 CIRCADIAN TIMEKEEPER-like isoform X13.7e-43100Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
A0A6J1G6P7 protein XAP5 CIRCADIAN TIMEKEEPER-like isoform X23.7e-43100Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
A0A6J1JCW5 protein XAP5 CIRCADIAN TIMEKEEPER isoform X14.6e-4197.03Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTAS KGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNK EEEEKEKLQKLQ+
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
A0A6J1KZ02 protein XAP5 CIRCADIAN TIMEKEEPER-like isoform X28.4e-4399.01Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEK+VNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
A0A6J1L0U2 protein XAP5 CIRCADIAN TIMEKEEPER-like isoform X18.4e-4399.01Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEK+VNIRNKFEEEEKEKLQKLQR
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
SwissProt top hitse value%identityAlignment
B8BDW1 Protein XAP5 CIRCADIAN TIMEKEEPER1.7e-3788.12Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSG GDGYVGTAQDAV+IRRLEKQREAERRKI+ELK K  S  GQPGLLQFGSSTSEILETAFKKETVGLVTRE+YVEKRVNIR K EEEEKEKLQKLQ+
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
Q69JZ7 Protein XAP5 CIRCADIAN TIMEKEEPER1.7e-3788.12Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSG GDGYVGTAQDAV+IRRLEKQREAERRKI+ELK K  S  GQPGLLQFGSSTSEILETAFKKETVGLVTRE+YVEKRVNIR K EEEEKEKLQKLQ+
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
Q8H110 Protein XAP5 CIRCADIAN TIMEKEEPER7.0e-3987.13Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRL+KQREAER+KIQELK+K+AS   Q GLLQFG+S+ EIL+TAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQ+
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E
Arabidopsis top hitse value%identityAlignment
AT2G21150.1 XAP5 family protein5.0e-4087.13Show/hide
Query:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR
        MSGMGDGYVGTAQDAVRIRRL+KQREAER+KIQELK+K+AS   Q GLLQFG+S+ EIL+TAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQ+
Subjt:  MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQR

Query:  E
        E
Subjt:  E

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCATGGGAGATGGATACGTCGGCACTGCCCAAGACGCCGTCAGGATTCGAAGACTCGAGAAGCAGAGGGAAGCCGAGCGCCGGAAAATCCAGGAGCTCAAGGC
CAAGACTGCCTCCGACAAAGGCCAGCCTGGTCTCCTTCAATTTGGCTCCAGTACCTCTGAGATTCTTGAAACAGCATTCAAGAAGGAAACTGTTGGTCTGGTGACGAGAG
AAGAGTATGTTGAGAAGAGAGTGAACATTCGAAACAAATTTGAGGAGGAGGAGAAGGAGAAACTTCAAAAGCTACAACGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
AATATTTAAAAATGATGGTTTAACTCAAACGGATTCGAAATTCAATAAAATTCCGGATTAACGCTTTATTGCTCCACCTTCGATCCATTCCGAAAGGCGGCAACTCGGGA
CCGCGTGACGCAGAGCGCGCCGGCGACGACTGTAGAAAGATCGGAAGAAGATGTCGGGCATGGGAGATGGATACGTCGGCACTGCCCAAGACGCCGTCAGGATTCGAAGA
CTCGAGAAGCAGAGGGAAGCCGAGCGCCGGAAAATCCAGGAGCTCAAGGCCAAGACTGCCTCCGACAAAGGCCAGCCTGGTCTCCTTCAATTTGGCTCCAGTACCTCTGA
GATTCTTGAAACAGCATTCAAGAAGGAAACTGTTGGTCTGGTGACGAGAGAAGAGTATGTTGAGAAGAGAGTGAACATTCGAAACAAATTTGAGGAGGAGGAGAAGGAGA
AACTTCAAAAGCTACAACGAGAGTGAGTTTTCTCATTGTCTTCTTCTAATTAGGGCGTTGTTAATAGATTTATAAGTAAGGAATACATCTCCATTGGCCTTTTGGGGAAA
CCAAAAGCAAAACCATGAGATCTTATGCTCAAAGTGGACAATATCATACTGTTCTAGAGAATCGTGATTTCTAACGTTCCCTTCATTGTTTTTTATTTCCCTGTCTTCAG
GGAAGAGGAACTCCAATTGCAAAAACGGAGGAAAAGGAAAATAAGGGGGAATTCACGTTTGTCTTTCTCTGATGATTTTGAGAATGGAAGCGATGAGGACGATGATAATA
AAAATTTGGAGCCAAGGAAGCTTGGGCGTGATAAACTTGGGAAAGATCCTACAGTGGAGACTAGCTTTTTGCCTGATAGTGAGCGGGAAGCTGAGGAGCAAGCTGAGCGT
GAAAGGCTTAAGAAACAGTGGCTTCGGGAGCAGGAGCAAATTCGAAGCGAGCCACTTCAAATTACTTACAGTTATTGGGATGGAACTGGGCATAGACGAGTCATTCAGGC
ACGAAAAGGTGATAGAATTGGAGAGTTTCTGCGGGCTGTACAGCAGCAACTCGCTCCTGAGTTTCGGGAGATAAGGACTACCTCGGTAGAGAATTTGCTCTATGTGAAGG
AGGATCTTATAATACCACACCAACATAGCTTCTATGAGCTTATTGTGAACAAGGCTAGAGGCAAAAGTGGCCCGCTTTTCCACTTTGACGTACATGAGGATGTTCGGACA
ACTGCTGATGCAACAATCGAGAAGGATGAGTCTCATGCTGGGAAAGTTGTTGAGAGGCACTGGTACGAGAAGAATAAGCATATCTTTCCTGCTTCAAGATGGGAGATATA
CGATCCAACCAAGAAATGGGAGCGGTACACCATCCACGGGGATTGATTCTATGACATACAGCACGGGTAGTATGGTTTATGCCTTGAATCCTCAGTTTTTTTCTTACCTC
TGCCATATTATGCACGCTTGAGTATGTTTGAAATAAGGAATTTGAAATTAACTGACAGGTGAATGGGATGTGTATTGTGTTATTTAAGCATTTGGCTTGTAGCATTGAGA
TATCATATTGTTCTCTTTAGAAAGCTGTTTAGTTTGGGGTCGAATGAGCTTAGGTTGTCGTTAGATCGACTTGCCTCTCGTTGAACTTCAAATTGTTTGAAATGTTATTT
TTATGGAAGAATGAGAGGCAGGGCAACAATACGAGTAATTGTCTTTATATTACATTTTTTATTAGGTGTAATTTTAAATTAGATAAATAATT
Protein sequenceShow/hide protein sequence
MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASDKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQRE