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Carg19801 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19801
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr02:1288878..1289174
RNA-Seq ExpressionCarg19801
SyntenyCarg19801
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3434655.1 hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]7.6e-1960.64Show/hide
Query:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSY-SMGGLINFRFRQ
        MEW  PKRRGP   QG  GQTL S+S+PP  LLTIFGIVI LLWFSQ+TG  ++Q+  T  +FQL L +LPILL+FFM+ Y S GG  NF+ R+
Subjt:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSY-SMGGLINFRFRQ

KAG7010871.1 hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2466.34Show/hide
Query:  MEWVQPKRRGP--LQGLAGQTL-GSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQLPFGST
        MEW++PKRRGP   Q   GQTL GSVSSPPPQLLTIFGIVI LLWFSQ T   ++QM  + ++FQL+LFLLPIL++FFMSSYSM GLIN R  +   GS 
Subjt:  MEWVQPKRRGP--LQGLAGQTL-GSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQLPFGST

Query:  R
        R
Subjt:  R

KAG7035039.1 hypothetical protein SDJN02_01833, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-47100Show/hide
Query:  MEWVQPKRRGPLQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQLPFGSTR
        MEWVQPKRRGPLQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQLPFGSTR
Subjt:  MEWVQPKRRGPLQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQLPFGSTR

PON83413.1 Transmembrane protein [Trema orientale]8.4e-1855.91Show/hide
Query:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ
        MEW  PKRRGP   QG   QT+ S+S+P   LL IF IV+ LLW SQ+TG  ++Q+  T  +FQL +FLLP+LL+ FM+SYS  GL NFRFR+
Subjt:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ

XP_021638526.1 uncharacterized protein LOC110633978 [Hevea brasiliensis]1.3e-1859.14Show/hide
Query:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ
        MEW  P+RRGP    G AGQTL S+S+PP  LLTIFGIVI LLW SQ+T + +SQ+  T  +FQLVLFLLPILL+FF++SYS   ++  R +Q
Subjt:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ

TrEMBL top hitse value%identityAlignment
A0A067JUL1 Uncharacterized protein6.9e-1855.91Show/hide
Query:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ
        MEW  PKRRGP   QG AGQT+ S+S+PPP LLTIFGIVI LLW SQ+TG  ++Q+  +  +FQL +FLLPILL+  ++  S   ++ FR RQ
Subjt:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ

A0A0A0LLH8 Uncharacterized protein6.9e-1859.6Show/hide
Query:  MEWVQPKRRGP--LQGL--AGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQLPFG
        M+   PKRRGP   +GL   GQTL SVS PP QLL IFGIVI LLWFSQ     E+Q+     SFQL LFLLPI ++FFM SYS   LINF FR+ P G
Subjt:  MEWVQPKRRGP--LQGL--AGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQLPFG

A0A2P5ED06 Transmembrane protein4.0e-1855.91Show/hide
Query:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ
        MEW  PKRRGP   QG   QT+ S+S+P   LL IF IV+ LLW SQ+TG  ++Q+  T  +FQL +FLLP+LL+ FM+SYS  GL NFRFR+
Subjt:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ

A0A5N6QRB9 Uncharacterized protein2.0e-1761.18Show/hide
Query:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGG
        MEW   KRRGP   QG  GQTLGS+S+PP  LLTIFGIVI LLW SQ T + ++Q+  T  +FQL +FLLPILL+ FM++YS GG
Subjt:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGG

B9STD1 Uncharacterized protein9.0e-1855.91Show/hide
Query:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ
        MEW  P+RRGP   QG  GQTLGS+S PPP LL IFGIVI LLW SQ+T + ++Q+  +  +FQL LFLLP+LL+  ++SYS   +  FR RQ
Subjt:  MEWVQPKRRGP--LQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGGTACAACCAAAGAGGAGAGGGCCTCTCCAGGGATTGGCAGGACAAACCCTAGGGTCTGTTTCATCTCCACCACCACAATTGCTCACCATTTTTGGCATTGT
CATTGCTTTGCTTTGGTTCTCTCAGCACACGGGCAATGAAGAATCTCAAATGTTTGGGACACCCGCCAGTTTCCAGCTGGTTCTTTTCTTGTTGCCCATCTTGCTGGTTT
TCTTCATGTCTTCATATTCCATGGGTGGACTGATCAACTTCCGATTTCGGCAACTGCCATTCGGGTCGACTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGGGTACAACCAAAGAGGAGAGGGCCTCTCCAGGGATTGGCAGGACAAACCCTAGGGTCTGTTTCATCTCCACCACCACAATTGCTCACCATTTTTGGCATTGT
CATTGCTTTGCTTTGGTTCTCTCAGCACACGGGCAATGAAGAATCTCAAATGTTTGGGACACCCGCCAGTTTCCAGCTGGTTCTTTTCTTGTTGCCCATCTTGCTGGTTT
TCTTCATGTCTTCATATTCCATGGGTGGACTGATCAACTTCCGATTTCGGCAACTGCCATTCGGGTCGACTCGATGA
Protein sequenceShow/hide protein sequence
MEWVQPKRRGPLQGLAGQTLGSVSSPPPQLLTIFGIVIALLWFSQHTGNEESQMFGTPASFQLVLFLLPILLVFFMSSYSMGGLINFRFRQLPFGSTR