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Carg19823 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19823
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChromatin-remodeling ATPase INO80
Genome locationCarg_Chr05:4698528..4700583
RNA-Seq ExpressionCarg19823
SyntenyCarg19823
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011443.1 hypothetical protein SDJN02_26349, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-1155Show/hide
Query:  EGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQC---------GVHLVGVPHRLEKGTSAHEDAG
        EGKP+RE P R IS S     LQMV+E DTGRCAS  +VP+R +DT++C         GV L  VPHRLE+G SA  DAG
Subjt:  EGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQC---------GVHLVGVPHRLEKGTSAHEDAG
KAG7011668.1 CDPK-related protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0864.29Show/hide
Query:  ETRFKNIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQC
        ETRFKN+EGK + +SP R I  S   G LQMV E DTG+CASEE+ PQRG DT QC
Subjt:  ETRFKNIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQC
KAG7020326.1 Gamma-glutamylcyclotransferase 2-1 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1440.49Show/hide
Query:  GVSYERNGGTEKIRG--------------------RKPEESLMPPL-----FTSNAQKNPGEVVL-IVPLGRFSSKETRFKNIEGKPKRESPNRIISVSG
        GV+Y  +GG+E+ R                      K ++S+ P L     FTS   K   +  L   PL   +S       +E KP+ ES  R IS SG
Subjt:  GVSYERNGGTEKIRG--------------------RKPEESLMPPL-----FTSNAQKNPGEVVL-IVPLGRFSSKETRFKNIEGKPKRESPNRIISVSG

Query:  EPGLLQMVSELDTGRCASEESVPQRGIDTKQC---------GVHLVGVPHRLEKGTSAHEDAG
          GLLQMVSE DTGRCAS  +VP+RG+DT++C         GV L+ VPHRL++G SA EDAG
Subjt:  EPGLLQMVSELDTGRCASEESVPQRGIDTKQC---------GVHLVGVPHRLEKGTSAHEDAG
KAG7024023.1 hypothetical protein SDJN02_15052, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1361.33Show/hide
Query:  GKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVG-----VPHRLEKGTSAHEDAG
        GKP+RESP R IS SG    LQMVSE DTGRCAS  +VP+RG+DT++C     G     VPHRLE+G SA EDAG
Subjt:  GKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVG-----VPHRLEKGTSAHEDAG
KAG7029873.1 hypothetical protein SDJN02_08216, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-105100Show/hide
Query:  MELSTKMFNLSRRIAIQLLESSEAELNEPVEGHPSHAYKAGARMGHSFGLRSDFESGYGRRMSRIMKVGVSYERNGGTEKIRGRKPEESLMPPLFTSNAQ
        MELSTKMFNLSRRIAIQLLESSEAELNEPVEGHPSHAYKAGARMGHSFGLRSDFESGYGRRMSRIMKVGVSYERNGGTEKIRGRKPEESLMPPLFTSNAQ
Subjt:  MELSTKMFNLSRRIAIQLLESSEAELNEPVEGHPSHAYKAGARMGHSFGLRSDFESGYGRRMSRIMKVGVSYERNGGTEKIRGRKPEESLMPPLFTSNAQ

Query:  KNPGEVVLIVPLGRFSSKETRFKNIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGVPHRLEKGTSAHEDAGL
        KNPGEVVLIVPLGRFSSKETRFKNIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGVPHRLEKGTSAHEDAGL
Subjt:  KNPGEVVLIVPLGRFSSKETRFKNIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGVPHRLEKGTSAHEDAGL
TrEMBL top hitse value%identityAlignment
A0A6J1EAZ7 Chromatin-remodeling ATPase INO802.1e-0551.72Show/hide
Query:  NIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGV
        N++ K +RE P R  S SG   LL MV ELDTGRCAS+E+ P+R +DT+ C    VG+
Subjt:  NIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGV
A0A6J1EBE0 Chromatin-remodeling ATPase INO802.1e-0551.72Show/hide
Query:  NIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGV
        N++ K +RE P R  S SG   LL MV ELDTGRCAS+E+ P+R +DT+ C    VG+
Subjt:  NIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGV
A0A6J1EEE8 Chromatin-remodeling ATPase INO802.1e-0551.72Show/hide
Query:  NIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGV
        N++ K +RE P R  S SG   LL MV ELDTGRCAS+E+ P+R +DT+ C    VG+
Subjt:  NIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCAGTACAAAGATGTTTAACCTGAGTCGAAGGATTGCAATCCAGCTACTGGAGTCGAGCGAAGCCGAGCTGAATGAGCCCGTGGAAGGGCACCCATCACACGC
ATATAAGGCTGGAGCGCGCATGGGTCATAGTTTTGGGTTGAGGAGCGACTTCGAGTCAGGTTATGGGCGTCGCATGTCGCGCATAATGAAAGTGGGCGTGAGTTATGAGA
GAAATGGTGGAACAGAGAAGATTCGTGGGCGTAAACCAGAAGAATCACTGATGCCGCCTTTGTTTACCTCAAATGCGCAGAAGAATCCAGGTGAGGTGGTGTTGATAGTT
CCATTGGGAAGGTTTTCTTCTAAGGAGACGCGTTTTAAAAACATTGAGGGGAAGCCCAAAAGGGAAAGCCCAAATAGAATAATATCTGTTAGCGGTGAGCCTGGGCTGTT
ACAAATGGTATCAGAGCTAGATACTGGGCGATGTGCCAGCGAGGAGTCTGTTCCCCAAAGAGGGATAGACACGAAGCAGTGTGGGGTGCATTTGGTGGGGGTCCCACATC
GATTAGAGAAAGGAACGAGTGCCCACGAGGACGCTGGACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCAGTACAAAGATGTTTAACCTGAGTCGAAGGATTGCAATCCAGCTACTGGAGTCGAGCGAAGCCGAGCTGAATGAGCCCGTGGAAGGGCACCCATCACACGC
ATATAAGGCTGGAGCGCGCATGGGTCATAGTTTTGGGTTGAGGAGCGACTTCGAGTCAGGTTATGGGCGTCGCATGTCGCGCATAATGAAAGTGGGCGTGAGTTATGAGA
GAAATGGTGGAACAGAGAAGATTCGTGGGCGTAAACCAGAAGAATCACTGATGCCGCCTTTGTTTACCTCAAATGCGCAGAAGAATCCAGGTGAGGTGGTGTTGATAGTT
CCATTGGGAAGGTTTTCTTCTAAGGAGACGCGTTTTAAAAACATTGAGGGGAAGCCCAAAAGGGAAAGCCCAAATAGAATAATATCTGTTAGCGGTGAGCCTGGGCTGTT
ACAAATGGTATCAGAGCTAGATACTGGGCGATGTGCCAGCGAGGAGTCTGTTCCCCAAAGAGGGATAGACACGAAGCAGTGTGGGGTGCATTTGGTGGGGGTCCCACATC
GATTAGAGAAAGGAACGAGTGCCCACGAGGACGCTGGACTGTGA
Protein sequenceShow/hide protein sequence
MELSTKMFNLSRRIAIQLLESSEAELNEPVEGHPSHAYKAGARMGHSFGLRSDFESGYGRRMSRIMKVGVSYERNGGTEKIRGRKPEESLMPPLFTSNAQKNPGEVVLIV
PLGRFSSKETRFKNIEGKPKRESPNRIISVSGEPGLLQMVSELDTGRCASEESVPQRGIDTKQCGVHLVGVPHRLEKGTSAHEDAGL