CuGenDBv2

Gene ID	Carg19885
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SAP30-binding protein-like isoform X2
Genome location	Carg_Chr13:7037664..7038280
RNA-Seq Expression	Carg19885
Synteny	Carg19885
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0016874 - ligase activity (molecular function)
InterPro domains	IPR012479 - SAP30-binding protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6583951.1 SAP30-binding protein, partial [Cucurbita argyrosperma subsp. sororia]

4.6e-55

95.16

Show/hide

Query:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
        K+ Y+  +EADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
Subjt:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG

Query:  SDAASAHSTLLSAANVGSGYMAFA
        SDAASAHSTLLSAANVGSGYMAFA
Subjt:  SDAASAHSTLLSAANVGSGYMAFA

KAG7019570.1 hypothetical protein SDJN02_18531, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.7e-76

100

Show/hide

Query:  MWWRLENMLQSTNNCIIYMHLLLISNNIFKASYFVLEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDA
        MWWRLENMLQSTNNCIIYMHLLLISNNIFKASYFVLEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDA
Subjt:  MWWRLENMLQSTNNCIIYMHLLLISNNIFKASYFVLEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDA

Query:  ITRDGRQNKKSKWDKVDGDRKNPVISGGSDAASAHSTLLSAANVGSGYMAFA
        ITRDGRQNKKSKWDKVDGDRKNPVISGGSDAASAHSTLLSAANVGSGYMAFA
Subjt:  ITRDGRQNKKSKWDKVDGDRKNPVISGGSDAASAHSTLLSAANVGSGYMAFA

XP_022927297.1 uncharacterized protein LOC111434175 isoform X1 [Cucurbita moschata]

4.6e-55

95.16

Show/hide

Query:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
        K+ Y+  +EADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
Subjt:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG

Query:  SDAASAHSTLLSAANVGSGYMAFA
        SDAASAHSTLLSAANVGSGYMAFA
Subjt:  SDAASAHSTLLSAANVGSGYMAFA

XP_022927298.1 SAP30-binding protein-like isoform X2 [Cucurbita moschata]

4.6e-55

95.16

Show/hide

Query:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
        K+ Y+  +EADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
Subjt:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG

Query:  SDAASAHSTLLSAANVGSGYMAFA
        SDAASAHSTLLSAANVGSGYMAFA
Subjt:  SDAASAHSTLLSAANVGSGYMAFA

XP_023519550.1 SAP30-binding protein-like isoform X2 [Cucurbita pepo subsp. pepo]

4.6e-55

95.16

Show/hide

Query:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
        K+ Y+  +EADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
Subjt:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG

Query:  SDAASAHSTLLSAANVGSGYMAFA
        SDAASAHSTLLSAANVGSGYMAFA
Subjt:  SDAASAHSTLLSAANVGSGYMAFA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EGS0 uncharacterized protein LOC111434175 isoform X1

2.2e-55

95.16

Show/hide

Query:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
        K+ Y+  +EADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
Subjt:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG

Query:  SDAASAHSTLLSAANVGSGYMAFA
        SDAASAHSTLLSAANVGSGYMAFA
Subjt:  SDAASAHSTLLSAANVGSGYMAFA

A0A6J1EKL6 SAP30-binding protein-like isoform X2

2.2e-55

95.16

Show/hide

Query:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
        K+ Y+  +EADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
Subjt:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG

Query:  SDAASAHSTLLSAANVGSGYMAFA
        SDAASAHSTLLSAANVGSGYMAFA
Subjt:  SDAASAHSTLLSAANVGSGYMAFA

A0A6J1K652 DNA ligase 1 isoform X1

6.9e-49

87.5

Show/hide

Query:  YFVLEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGGSDAA
        Y  +EADMKREMERKELERKKSPKMEFVSGGTQPGGTVV APK+NIPFSGVSA+ G+GLHS A ASDAI RDGRQNKKSKWDKVDGDR+NPVISGGSDAA
Subjt:  YFVLEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGGSDAA

Query:  SAHSTLLSAANVGSGYMAFA
        SAH+ LLS+ANVGSGYMAFA
Subjt:  SAHSTLLSAANVGSGYMAFA

A0A6J1KJL8 SAP30-binding protein-like isoform X2

1.0e-52

91.13

Show/hide

Query:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
        K+ Y+  +EADMKREMERKELERKKSP+MEFV GGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDG+QNKKSKWDKVDGD KNPVISGG
Subjt:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG

Query:  SDAASAHSTLLSAANVGSGYMAFA
        SD+ASAHSTLLSAANVGSGYMAFA
Subjt:  SDAASAHSTLLSAANVGSGYMAFA

A0A6J1KLA4 uncharacterized protein LOC111495209 isoform X1

1.0e-52

91.13

Show/hide

Query:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG
        K+ Y+  +EADMKREMERKELERKKSP+MEFV GGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDG+QNKKSKWDKVDGD KNPVISGG
Subjt:  KASYFV-LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGG

Query:  SDAASAHSTLLSAANVGSGYMAFA
        SD+ASAHSTLLSAANVGSGYMAFA
Subjt:  SDAASAHSTLLSAANVGSGYMAFA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G29220.1 transcriptional regulator family protein

3.8e-23

52.89

Show/hide

Query:  LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGGS----DA
        +E DMK E ERKE E KK+ K++FVS GTQP G V AA K NIP  G+ A+A +GL S    ++   RDGR NKKSKWDKVDGD KNP ++ G+     +
Subjt:  LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGGS----DA

Query:  ASAHSTLLSAANVGSGYMAFA
          +++ L+SA + GSGY AFA
Subjt:  ASAHSTLLSAANVGSGYMAFA

AT1G29220.2 transcriptional regulator family protein

3.8e-23

52.89

Show/hide

Query:  LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGGS----DA
        +E DMK E ERKE E KK+ K++FVS GTQP G V AA K NIP  G+ A+A +GL S    ++   RDGR NKKSKWDKVDGD KNP ++ G+     +
Subjt:  LEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKKSKWDKVDGDRKNPVISGGS----DA

Query:  ASAHSTLLSAANVGSGYMAFA
          +++ L+SA + GSGY AFA
Subjt:  ASAHSTLLSAANVGSGYMAFA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGTGGAGACTGGAGAACATGTTACAAAGTACAAACAATTGTATTATTTACATGCACTTATTATTAATTTCAAACAATATTTTCAAAGCTTCATATTTTGTTCTAGA
GGCTGACATGAAACGTGAGATGGAGAGGAAGGAGCTGGAAAGGAAGAAAAGTCCGAAGATGGAGTTTGTTTCTGGAGGAACACAACCTGGTGGTACAGTTGTGGCTGCTC
CTAAAATAAATATACCTTTTTCAGGTGTTTCAGCTGTCGCTGGTAATGGATTACATTCTGGAGCTCATGCATCTGATGCCATTACTAGAGATGGAAGACAAAACAAAAAA
TCAAAATGGGATAAGGTAGATGGCGATAGAAAAAATCCAGTCATTTCTGGTGGGTCTGATGCAGCTAGTGCTCATTCAACTTTACTATCTGCTGCTAATGTTGGCTCTGG
ATACATGGCTTTTGCGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MWWRLENMLQSTNNCIIYMHLLLISNNIFKASYFVLEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVAAPKINIPFSGVSAVAGNGLHSGAHASDAITRDGRQNKK
SKWDKVDGDRKNPVISGGSDAASAHSTLLSAANVGSGYMAFA

Carg19885 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome