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Carg19893 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19893
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCupin type-1 domain-containing protein
Genome locationCarg_Chr13:7003842..7004345
RNA-Seq ExpressionCarg19893
SyntenyCarg19893
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583945.1 hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sororia]5.3e-8997.06Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRT---PPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQ
        MEDQQVLQNLDSLWFFATVFSNRT   PPPPPVVQKPTQ+DF EPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQ
Subjt:  MEDQQVLQNLDSLWFFATVFSNRT---PPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQ

Query:  RRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        RRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  RRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

KAG7019562.1 hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-92100Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK
        MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK

Query:  IVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        IVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  IVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

XP_022927166.1 uncharacterized protein LOC111434099 [Cucurbita moschata]3.4e-8897.6Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK
        MEDQQVLQNLDSLWFFATVFSNRT  PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK

Query:  IVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        IVGEMDLSDAVKEICECWLLEQRIGGGNQY+RG RKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  IVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

XP_023000977.1 uncharacterized protein LOC111495257 [Cucurbita maxima]2.8e-8289.53Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTP-----PPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL
        MEDQQVLQNLDSLWFFATVFSN+ P     PP PVVQKPT++DFVE PGGEIATPIFQNQQNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTP-----PPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL

Query:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
         QRR+IVGEMDLSDAVKEICECWLLEQRIGGGNQY+RGRRKMKKKK+PPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

XP_023520136.1 uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo]5.9e-8894.77Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRT-----PPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL
        MEDQQVLQNLDSLWFFATVFSNRT     PPPPPVVQKPTQ+DFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL
Subjt:  MEDQQVLQNLDSLWFFATVFSNRT-----PPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL

Query:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQY+RGRRKMKKKKMPPFEDSMAMKEHIRSWA+AVAC VR
Subjt:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

TrEMBL top hitse value%identityAlignment
A0A0A0LX63 Uncharacterized protein1.3e-4061.54Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSR-GRRWGCLGQRR
        ME QQVL+N DSLWFFATVFSNRT   PPVV KP Q+DFV   G EIATPI +N     EE N+ + K  ET         E+RRK+R GR WG   +++
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSR-GRRWGCLGQRR

Query:  KIVGEMDLSDAVKEICECWLLEQ-RIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
         IVGE+DLS AVKEICECW  E+ RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Subjt:  KIVGEMDLSDAVKEICECWLLEQ-RIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

A0A1S3B8X4 uncharacterized protein LOC1034870564.3e-4461.76Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQR
        ME QQV +N DSLWFF+TVFSNRT   PPVV+KP Q+DFVEP G EIATPI +N++N VGEE+ +  E+           + E+RRK+RGRR WG   +R
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQR

Query:  RKIVGEMDLSDAVKEICECWLLE-QRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        + +VGE+DLS AVKEICECW  E  RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Subjt:  RKIVGEMDLSDAVKEICECWLLE-QRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

A0A5A7UQZ2 Uncharacterized protein4.3e-4461.76Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQR
        ME QQV +N DSLWFF+TVFSNRT   PPVV+KP Q+DFVEP G EIATPI +N++N VGEE+ +  E+           + E+RRK+RGRR WG   +R
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQN-VGEERNIVDEKTNETGGGLGLIITEERRKSRGRR-WGCLGQR

Query:  RKIVGEMDLSDAVKEICECWLLE-QRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        + +VGE+DLS AVKEICECW  E  RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Subjt:  RKIVGEMDLSDAVKEICECWLLE-QRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

A0A6J1EGY0 uncharacterized protein LOC1114340991.7e-8897.6Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK
        MEDQQVLQNLDSLWFFATVFSNRT  PPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRK

Query:  IVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
        IVGEMDLSDAVKEICECWLLEQRIGGGNQY+RG RKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  IVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

A0A6J1KF61 uncharacterized protein LOC1114952571.4e-8289.53Show/hide
Query:  MEDQQVLQNLDSLWFFATVFSNRTP-----PPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL
        MEDQQVLQNLDSLWFFATVFSN+ P     PP PVVQKPT++DFVE PGGEIATPIFQNQQNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL
Subjt:  MEDQQVLQNLDSLWFFATVFSNRTP-----PPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCL

Query:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
         QRR+IVGEMDLSDAVKEICECWLLEQRIGGGNQY+RGRRKMKKKK+PPFEDSMAMKEHIRSWAYAVACTVR
Subjt:  GQRRKIVGEMDLSDAVKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAGAACGCCGCCGCCACCGCCGGTCGTCCAAAAACCTACTCAACA
CGACTTCGTTGAGCCTCCGGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGAGGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGCG
GCGGGTTGGGGTTAATAATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGGGGCAGAGGAGAAAGATTGTCGGAGAGATGGATCTGAGTGATGCT
GTGAAGGAGATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCGGAGAGGGAGGAGGAAGATGAAGAAGAAGAAGATGCCTCCGTTTGAAGA
TAGTATGGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACCGTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAGAACGCCGCCGCCACCGCCGGTCGTCCAAAAACCTACTCAACA
CGACTTCGTTGAGCCTCCGGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGAGGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGCG
GCGGGTTGGGGTTAATAATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGGGGCAGAGGAGAAAGATTGTCGGAGAGATGGATCTGAGTGATGCT
GTGAAGGAGATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCGGAGAGGGAGGAGGAAGATGAAGAAGAAGAAGATGCCTCCGTTTGAAGA
TAGTATGGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACCGTTAGATGA
Protein sequenceShow/hide protein sequence
MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDA
VKEICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR