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Carg19903 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19903
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncationic amino acid transporter 1-like
Genome locationCarg_Chr13:6945626..6946176
RNA-Seq ExpressionCarg19903
SyntenyCarg19903
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019552.1 hypothetical protein SDJN02_18513, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-72100Show/hide
Query:  MKLSNCWKKAAQNIWTLHNGMILSTLSISSHGFALSFPKRPHTPNPNNPQQSSPRTKHTISLPLIEARLLSLEVTFDHIFEALLAWLGLGHGSDTMLGIT
        MKLSNCWKKAAQNIWTLHNGMILSTLSISSHGFALSFPKRPHTPNPNNPQQSSPRTKHTISLPLIEARLLSLEVTFDHIFEALLAWLGLGHGSDTMLGIT
Subjt:  MKLSNCWKKAAQNIWTLHNGMILSTLSISSHGFALSFPKRPHTPNPNNPQQSSPRTKHTISLPLIEARLLSLEVTFDHIFEALLAWLGLGHGSDTMLGIT

Query:  TLHNGMILSTLSIKSHGFALGFPKKPHTNGDSIPHS
        TLHNGMILSTLSIKSHGFALGFPKKPHTNGDSIPHS
Subjt:  TLHNGMILSTLSIKSHGFALGFPKKPHTNGDSIPHS
KAG7025324.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-0444.93Show/hide
Query:  PLIEARLLSLEVTFDHIFEALLAWLGLGHGSDTMLGITTLHNGMILSTLSIKSHGFALGFPKKPHTNGD
        PL+  +   LE       +  +    L      +LGIT LH GMILS LSI S+GFALGFPK+ +TN D
Subjt:  PLIEARLLSLEVTFDHIFEALLAWLGLGHGSDTMLGITTLHNGMILSTLSIKSHGFALGFPKKPHTNGD
XP_022954448.1 cationic amino acid transporter 1-like [Cucurbita moschata]4.6e-0673.68Show/hide
Query:  MLGITTLHNGMILSTLSIKSHGFALGFPKKPHTNGDSI
        +L IT L+N MILSTLSI SHGF+LG PK+PHT+GDSI
Subjt:  MLGITTLHNGMILSTLSIKSHGFALGFPKKPHTNGDSI
TrEMBL top hitse value%identityAlignment
A0A6J1GR43 cationic amino acid transporter 1-like2.2e-0673.68Show/hide
Query:  MLGITTLHNGMILSTLSIKSHGFALGFPKKPHTNGDSI
        +L IT L+N MILSTLSI SHGF+LG PK+PHT+GDSI
Subjt:  MLGITTLHNGMILSTLSIKSHGFALGFPKKPHTNGDSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTATCAAATTGCTGGAAAAAGGCGGCGCAAAACATCTGGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGAGCTT
CCCCAAAAGGCCTCATACCCCCAATCCCAATAATCCTCAACAATCCTCCCCTCGAACAAAGCACACTATAAGCCTCCCCTTAATTGAGGCTCGACTCCTTTCTCTGGAGG
TCACTTTTGACCACATCTTCGAGGCTCTATTGGCATGGTTAGGTTTAGGGCATGGCTCTGATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACT
TTGAGCATAAAGTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAAGCCTCATACCAATGGAGATAGTATTCCTCACTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTATCAAATTGCTGGAAAAAGGCGGCGCAAAACATCTGGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGAGCTT
CCCCAAAAGGCCTCATACCCCCAATCCCAATAATCCTCAACAATCCTCCCCTCGAACAAAGCACACTATAAGCCTCCCCTTAATTGAGGCTCGACTCCTTTCTCTGGAGG
TCACTTTTGACCACATCTTCGAGGCTCTATTGGCATGGTTAGGTTTAGGGCATGGCTCTGATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACT
TTGAGCATAAAGTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAAGCCTCATACCAATGGAGATAGTATTCCTCACTCATAA
Protein sequenceShow/hide protein sequence
MKLSNCWKKAAQNIWTLHNGMILSTLSISSHGFALSFPKRPHTPNPNNPQQSSPRTKHTISLPLIEARLLSLEVTFDHIFEALLAWLGLGHGSDTMLGITTLHNGMILST
LSIKSHGFALGFPKKPHTNGDSIPHS