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Carg19907 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19907
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPeroxisome proliferator-activated receptor gamma coactivator-related protein like
Genome locationCarg_Chr13:6930938..6931697
RNA-Seq ExpressionCarg19907
SyntenyCarg19907
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583934.1 GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. sororia]9.6e-9891.87Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
        DLYDAVPDMN LLRAFAELTGLESDMARASWVTRNYQSVLR                GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL

Query:  NFYSSTSQR
        NFYSSTSQR
Subjt:  NFYSSTSQR

KAG7019548.1 hypothetical protein SDJN02_18509, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-104100Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLRGAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLALNFYSSTSQRRNEL
        DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLRGAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLALNFYSSTSQRRNEL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLRGAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLALNFYSSTSQRRNEL

XP_022927468.1 uncharacterized protein LOC111434285 [Cucurbita moschata]9.3e-10192.49Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
        DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR                GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL

Query:  NFYSSTSQRRNEL
        NFYSSTSQRRNEL
Subjt:  NFYSSTSQRRNEL

XP_023001469.1 uncharacterized protein LOC111495595 [Cucurbita maxima]3.7e-9789.2Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGL+FW SMWSLAWDYAKNYAWRDISYS
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
        DLYDA+PD+NELLRAF ELTGLES+MARASWVTRNYQSVLR                GAWRDVVETVQVEVV+GGLLKDCLELGSGDLKGMVQILKDLAL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL

Query:  NFYSSTSQRRNEL
        NFYSSTSQRRNEL
Subjt:  NFYSSTSQRRNEL

XP_023519256.1 uncharacterized protein LOC111782689 [Cucurbita pepo subsp. pepo]3.3e-9890.61Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MATTAAS PVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIA QLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
        DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR                GAWR+VVETVQVEVV+GGLLKDCLELGSGDLKGMVQILKDLAL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL

Query:  NFYSSTSQRRNEL
        NFYSSTSQRRNEL
Subjt:  NFYSSTSQRRNEL

TrEMBL top hitse value%identityAlignment
A0A0A0LV11 Uncharacterized protein2.7e-8278.4Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MA TAASLP  LFFLLLLT+ PPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRAR+IA +LE+GLGL+FWGS+WSLAWDY KNYAWRD+ +S
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
        +LYDAVPDMNELLR FAEL+ LESD ARA+WV+RNYQSVLR                GAWR+VVETVQ EVV+GGLLKDCLELGSGDLKG+VQILKDLAL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL

Query:  NFYSSTSQRRNEL
        NFYS  S R NEL
Subjt:  NFYSSTSQRRNEL

A0A1S3B877 uncharacterized protein LOC1034872375.7e-8077.78Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSL--SFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDIS
        M  TAASLPV LFFLLLLT+ PPSL  SFSFSQFKTLFSLAHSLM+RVANLRASRGDFAGSQRAR+IA +LE+GLGL+FWGS+WSLAWDY KNYAWRD+ 
Subjt:  MATTAASLPVVLFFLLLLTSPPPSL--SFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDIS

Query:  YSDLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDL
        +S+LYDAVP+MNEL+RAFAEL+ LESD ARA+WV+RNYQSVLR                GAWR+VVETVQ EVV+GGLLKDCLELGSGDLKG+VQILKDL
Subjt:  YSDLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDL

Query:  ALNFYSS
        ALNFYSS
Subjt:  ALNFYSS

A0A6J1CER5 uncharacterized protein LOC1110108244.7e-8277.31Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MA TAASLPV LF LLLLT+PPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDF+GSQRAR IA +LE+GLGL  WG MWSLAWDYAKNYAWRD++Y+
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
        +LYDAV DMNELLRAFAEL  LESD ARA WV+RNYQSVLR                GAWR+VVET+Q EVV+GGLLKDCLELGSGDLKG+VQILKDLAL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL

Query:  NFYSSTSQRR---NEL
        NFYSST   R   NEL
Subjt:  NFYSSTSQRR---NEL

A0A6J1EL34 uncharacterized protein LOC1114342854.5e-10192.49Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
        DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR                GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL

Query:  NFYSSTSQRRNEL
        NFYSSTSQRRNEL
Subjt:  NFYSSTSQRRNEL

A0A6J1KMT9 uncharacterized protein LOC1114955951.8e-9789.2Show/hide
Query:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS
        MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGL+FW SMWSLAWDYAKNYAWRDISYS
Subjt:  MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYS

Query:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL
        DLYDA+PD+NELLRAF ELTGLES+MARASWVTRNYQSVLR                GAWRDVVETVQVEVV+GGLLKDCLELGSGDLKGMVQILKDLAL
Subjt:  DLYDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLAL

Query:  NFYSSTSQRRNEL
        NFYSSTSQRRNEL
Subjt:  NFYSSTSQRRNEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G45660.1 unknown protein1.2e-4245.5Show/hide
Query:  VLFFLLLLTSPPP------SLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWR--DISYSDL
        VLF +L ++SP P      +  FSF+Q+KTL S++ SL+ RVANLRASRGD  GS R R +A ++++GLGL F    WS+ WDY  NYAWR   I Y ++
Subjt:  VLFFLLLLTSPPP------SLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWR--DISYSDL

Query:  YDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLALNF
        Y A+ D+NEL+    E    ES+  +AS V R+Y   LR                GA R+  E VQ EVV+G LL+DCLE+G  D+K ++QI KD+A+ F
Subjt:  YDAVPDMNELLRAFAELTGLESDMARASWVTRNYQSVLR----------------GAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLALNF

Query:  YSSTSQRRNEL
        +SS S+  +EL
Subjt:  YSSTSQRRNEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACAACGGCGGCGTCTCTTCCGGTCGTTTTGTTCTTCCTCCTCCTCCTCACTTCTCCGCCGCCGTCCCTTTCCTTCTCCTTCTCCCAATTCAAAACCCTATTTTC
ACTCGCACATTCCCTCATGTCTCGTGTCGCCAATCTACGCGCCTCTCGCGGAGACTTCGCCGGCTCGCAACGGGCCAGGCACATTGCCCATCAGCTAGAGCAAGGTCTCG
GACTAAACTTCTGGGGCTCCATGTGGTCGCTCGCCTGGGACTACGCGAAGAACTACGCATGGAGAGACATCTCCTATTCAGATCTCTACGACGCCGTTCCCGACATGAAC
GAGTTGCTTAGGGCTTTCGCCGAGTTGACTGGGTTGGAATCAGACATGGCAAGAGCGAGTTGGGTTACGCGGAATTACCAATCGGTCCTGAGGGGGGCTTGGAGGGATGT
GGTGGAGACGGTTCAAGTGGAGGTGGTGAACGGTGGATTGCTGAAGGACTGTTTGGAGCTGGGAAGTGGCGATTTGAAAGGCATGGTTCAGATTCTCAAGGATTTGGCTT
TGAATTTCTATTCCTCCACTTCTCAACGCCGTAATGAACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACAACGGCGGCGTCTCTTCCGGTCGTTTTGTTCTTCCTCCTCCTCCTCACTTCTCCGCCGCCGTCCCTTTCCTTCTCCTTCTCCCAATTCAAAACCCTATTTTC
ACTCGCACATTCCCTCATGTCTCGTGTCGCCAATCTACGCGCCTCTCGCGGAGACTTCGCCGGCTCGCAACGGGCCAGGCACATTGCCCATCAGCTAGAGCAAGGTCTCG
GACTAAACTTCTGGGGCTCCATGTGGTCGCTCGCCTGGGACTACGCGAAGAACTACGCATGGAGAGACATCTCCTATTCAGATCTCTACGACGCCGTTCCCGACATGAAC
GAGTTGCTTAGGGCTTTCGCCGAGTTGACTGGGTTGGAATCAGACATGGCAAGAGCGAGTTGGGTTACGCGGAATTACCAATCGGTCCTGAGGGGGGCTTGGAGGGATGT
GGTGGAGACGGTTCAAGTGGAGGTGGTGAACGGTGGATTGCTGAAGGACTGTTTGGAGCTGGGAAGTGGCGATTTGAAAGGCATGGTTCAGATTCTCAAGGATTTGGCTT
TGAATTTCTATTCCTCCACTTCTCAACGCCGTAATGAACTGTAA
Protein sequenceShow/hide protein sequence
MATTAASLPVVLFFLLLLTSPPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARHIAHQLEQGLGLNFWGSMWSLAWDYAKNYAWRDISYSDLYDAVPDMN
ELLRAFAELTGLESDMARASWVTRNYQSVLRGAWRDVVETVQVEVVNGGLLKDCLELGSGDLKGMVQILKDLALNFYSSTSQRRNEL