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Carg19908 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19908
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function, DUF584
Genome locationCarg_Chr13:6926157..6926702
RNA-Seq ExpressionCarg19908
SyntenyCarg19908
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927118.1 uncharacterized protein LOC111434057 [Cucurbita moschata]1.5e-97100Show/hide
Query:  MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRL
        MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRL
Subjt:  MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRL

Query:  SKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        SKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
Subjt:  SKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

XP_023001484.1 uncharacterized protein LOC111495606 [Cucurbita maxima]2.7e-7095.77Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV
        MAEEFQESEVIFSDLDH RYLH ADDDDCGEDFFN NCRGGMVV PRNKYQQRTVRDGGR+SKKVMASSLPVGIPERNRRRTTEEEDE DEEEMIPPHVV
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV

Query:  AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
Subjt:  AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

XP_023520036.1 uncharacterized protein LOC111783341 [Cucurbita pepo subsp. pepo]4.9e-7298.59Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV
        MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFN N RGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV

Query:  AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
Subjt:  AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

XP_023541188.1 uncharacterized protein LOC111801423 [Cucurbita pepo subsp. pepo]2.2e-4875.69Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDC-GEDFFNLNCRGGMVVAPRN-KYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPH
        MAEEFQESEVIFSD D  RYLHR D     GED  N NCR GM  APR+ KY  RTVR+GG  S K MASSLPVGIP+   RR  EE+DEMDEEEM+PPH
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDC-GEDFFNLNCRGGMVVAPRN-KYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPH

Query:  VVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        VVAERR+A KMAFSVCTGNGRTLKGRDL RVRNSILRMTGFLET
Subjt:  VVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

XP_038895158.1 uncharacterized protein LOC120083461 [Benincasa hispida]1.1e-5076.76Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV
        MAEEFQES+VIFSD  H RYL R DDDD G DFFN N R G+V APR KY  RT+RDGGRLSKK +A SLPV IPER  RR ++E+DEMD EE++PPH+V
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV

Query:  AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        AERR+AGKMAFSVCTGNGRTLKGRDL RVRNSILRMTGFLET
Subjt:  AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

TrEMBL top hitse value%identityAlignment
A0A1S3B8R0 uncharacterized protein LOC1034872607.2e-4573.29Show/hide
Query:  MAEEFQESEVIFSDL-DHRRYLHRADDDDCGEDFFNLNCRGGMVVA-PRNKYQQR-TVRDG-GRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIP
        MAEEFQESEVIFSDL DH RYL R DD     DFFN N R G+++A PR KY  R T+RDG  RLSKK +A SLPV IPER+  RT EE+D+MDEEE+IP
Subjt:  MAEEFQESEVIFSDL-DHRRYLHRADDDDCGEDFFNLNCRGGMVVA-PRNKYQQR-TVRDG-GRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIP

Query:  PHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        PH+V ERR+A KMAFSVCTGNGRTLKGRDL RVRNSILRMTGFLET
Subjt:  PHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

A0A6J1EK43 uncharacterized protein LOC1114340577.3e-98100Show/hide
Query:  MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRL
        MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRL
Subjt:  MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRL

Query:  SKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        SKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
Subjt:  SKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

A0A6J1GT17 uncharacterized protein LOC1114571751.1e-4875.69Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDC-GEDFFNLNCRGGMVVAPRN-KYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPH
        MAEEFQESEVIFSD D  RYLHR D     GED  N NCR GM  APR+ KY  RTVR+GG  S K MASSLPVGIP+   RR  EE+DEMDEEEM+PPH
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDC-GEDFFNLNCRGGMVVAPRN-KYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPH

Query:  VVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        VVAERR+A KMAFSVCTGNGRTLKGRDL RVRNSILRMTGFLET
Subjt:  VVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

A0A6J1K0L5 uncharacterized protein LOC1114904976.9e-4875Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDC-GEDFFNLNCRGGMVVAPRN-KYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPH
        MAEEFQESEVIFSD D  RYLHR D     GED  N NCR GM  APR+ KY  RTVR+GG  S K MASSLPVGIP+   RR  EE+DEMD EEM+PPH
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDC-GEDFFNLNCRGGMVVAPRN-KYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPH

Query:  VVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        VVAERR+A KMAFSVCTGNGRTLKGRDL RVRNSILRMTGFLET
Subjt:  VVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

A0A6J1KMV6 uncharacterized protein LOC1114956061.3e-7095.77Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV
        MAEEFQESEVIFSDLDH RYLH ADDDDCGEDFFN NCRGGMVV PRNKYQQRTVRDGGR+SKKVMASSLPVGIPERNRRRTTEEEDE DEEEMIPPHVV
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV

Query:  AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
        AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET
Subjt:  AERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29640.1 Protein of unknown function, DUF5841.3e-2248.61Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEE--DEMDEEEMIPPH
        M+EEF ESE+IFS  D+   + R +D +  E+   ++ R        NK  +R+       +    +SSLPV IP   RR +TEEE  D+    +MIPPH
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEE--DEMDEEEMIPPH

Query:  VVAERRM-AGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE
        ++  RRM  G+MAFSVCTGNGRTLKGRDL RVRNS+L++TGFLE
Subjt:  VVAERRM-AGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE

AT2G34340.1 Protein of unknown function, DUF5842.6e-2347.33Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPER-NRRRTTEEEDEMDEE-------
        MAEEF ESEV+FSD      LH+ +++            G  +   + +  +RT  +     K  ++SSLPV IPE   RR   +EEDE  EE       
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPER-NRRRTTEEEDEMDEE-------

Query:  EMIPPHVVAERRM-AGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE
        EMIPPH++  RR+  G+MAFSVC+G+GRTLKGRDL RVRNS+LR+TGFLE
Subjt:  EMIPPHVVAERRM-AGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE

AT4G18980.1 AtS40-33.4e-1542.96Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV
        M+EEFQESEVIFSD                E F     R    ++  N+  +R   +  ++S        PV IP R   R TEEE      EM PPHV+
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRRRTTEEEDEMDEEEMIPPHVV

Query:  AE-RRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE
         E RR   +MAFS C     TLKGRDL R RN++LRMTGFLE
Subjt:  AE-RRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE

AT4G21970.1 Protein of unknown function, DUF5845.1e-1137.86Show/hide
Query:  RTVRDGGRLSKKVMASSLPVGIPERNR-----RRTTEEE------DEMDEEEMIPPHVVAERRMAGKM--AFSVCTGNGRTLKGRDLRRVRNSILRMTGF
        R +  G  +S     SS P+ IP+ ++     ++ T         D+ DE  M+PPH +  +R+A     +FS+C G GRTLKGRDL + RN++L  TGF
Subjt:  RTVRDGGRLSKKVMASSLPVGIPERNR-----RRTTEEE------DEMDEEEMIPPHVVAERRMAGKM--AFSVCTGNGRTLKGRDLRRVRNSILRMTGF

Query:  LET
        LE+
Subjt:  LET

AT5G45630.1 Protein of unknown function, DUF5842.0e-1540.69Show/hide
Query:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRR----RTTEEEDEMDEEEMIP
        M+EEFQES++IFSD                +   + + R   +   RN  ++ T R       +    + PV IP  N R     TTEEED     +  P
Subjt:  MAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLPVGIPERNRR----RTTEEEDEMDEEEMIP

Query:  PHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE
        PHV+ ERRM  ++AFS C     TLKGRDL R RNS+LRMTGFLE
Subjt:  PHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCTCAGTACGACTCGGAGCCGAGCCGAGTCTGCTCCGATTCCCTCTCTATAAATACTGGCCCCTTCATCTTCGCCTTCCTACTGTTCCATTTCTCTTCACTTCA
ATCTTATATGGCTGAAGAATTCCAGGAATCCGAAGTGATTTTTTCCGATCTCGACCACCGCCGTTACCTCCACCGTGCCGACGACGACGATTGCGGCGAGGATTTCTTTA
ACTTAAACTGCCGCGGAGGAATGGTTGTAGCGCCGCGAAATAAGTATCAACAGCGGACGGTGCGCGATGGTGGACGGCTGTCGAAGAAGGTAATGGCGAGTTCGCTTCCG
GTAGGGATTCCGGAAAGAAACCGACGGAGGACGACGGAGGAAGAGGATGAAATGGACGAAGAGGAAATGATTCCGCCGCATGTGGTGGCGGAGAGGCGAATGGCAGGGAA
AATGGCGTTCTCTGTTTGTACTGGGAATGGAAGGACGCTGAAAGGACGAGATTTGAGACGAGTAAGGAATTCGATCCTTCGGATGACCGGATTCTTAGAAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCTCAGTACGACTCGGAGCCGAGCCGAGTCTGCTCCGATTCCCTCTCTATAAATACTGGCCCCTTCATCTTCGCCTTCCTACTGTTCCATTTCTCTTCACTTCA
ATCTTATATGGCTGAAGAATTCCAGGAATCCGAAGTGATTTTTTCCGATCTCGACCACCGCCGTTACCTCCACCGTGCCGACGACGACGATTGCGGCGAGGATTTCTTTA
ACTTAAACTGCCGCGGAGGAATGGTTGTAGCGCCGCGAAATAAGTATCAACAGCGGACGGTGCGCGATGGTGGACGGCTGTCGAAGAAGGTAATGGCGAGTTCGCTTCCG
GTAGGGATTCCGGAAAGAAACCGACGGAGGACGACGGAGGAAGAGGATGAAATGGACGAAGAGGAAATGATTCCGCCGCATGTGGTGGCGGAGAGGCGAATGGCAGGGAA
AATGGCGTTCTCTGTTTGTACTGGGAATGGAAGGACGCTGAAAGGACGAGATTTGAGACGAGTAAGGAATTCGATCCTTCGGATGACCGGATTCTTAGAAACGTGA
Protein sequenceShow/hide protein sequence
MCAQYDSEPSRVCSDSLSINTGPFIFAFLLFHFSSLQSYMAEEFQESEVIFSDLDHRRYLHRADDDDCGEDFFNLNCRGGMVVAPRNKYQQRTVRDGGRLSKKVMASSLP
VGIPERNRRRTTEEEDEMDEEEMIPPHVVAERRMAGKMAFSVCTGNGRTLKGRDLRRVRNSILRMTGFLET