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Carg19924 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19924
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprefoldin subunit 6-like
Genome locationCarg_Chr13:6844012..6850218
RNA-Seq ExpressionCarg19924
SyntenyCarg19924
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0043622 - cortical microtubule organization (biological process)
GO:0051131 - chaperone-mediated protein complex assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019532.1 Prefoldin subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-67100Show/hide
Query:  ATEEVDDSARMSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRK
        ATEEVDDSARMSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRK
Subjt:  ATEEVDDSARMSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRK

Query:  RIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
        RIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
Subjt:  RIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV

XP_022927004.1 prefoldin subunit 6-like [Cucurbita moschata]4.4e-5594.16Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        MSSTSAVRELQRELESKANDLSKLQK        IAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
        RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV

XP_023001490.1 prefoldin subunit 6-like [Cucurbita maxima]2.4e-5391.97Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        MSSTSAVRELQRELE+KANDLSKLQK        IAKNHQIRKKYTIQLGENELVLKEL+LLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
        RLDSALQDLEEKQNSKRDAILKLQQRIQS QAGKAKV
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV

XP_023519019.1 prefoldin subunit 6-like [Cucurbita pepo subsp. pepo]2.9e-5492.7Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        M STSAVRELQRELE+KANDLSKLQK        IAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
        RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV

XP_038895368.1 prefoldin subunit 6 [Benincasa hispida]6.0e-5289.71Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        MSSTSA+RELQRELE+KANDLSKLQK        IAKNHQ+RKKYTIQLGENELVLKELDLL DDANVYKLIGPVLVKQDLAEANANVRKRI+YISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK
        RLDSALQDLEEKQNSKRDAILKLQQRIQS QAGKAK
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK

TrEMBL top hitse value%identityAlignment
A0A6J1CEX4 prefoldin subunit 6-like1.1e-5188.97Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        MSS SA+RELQRELE+KAN+LSKLQK        IAKNHQ+RKKYTIQLGENELVLKELDLL DDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK
        RLDSALQDLEEKQNSKRDAILKLQQRIQS QAGKAK
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK

A0A6J1EGS1 prefoldin subunit 6-like2.1e-5594.16Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        MSSTSAVRELQRELESKANDLSKLQK        IAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
        RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV

A0A6J1GT51 prefoldin subunit 6-like2.4e-5188.24Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        MSST+ +RELQRELESKANDLSKLQK        IAKNHQ+RKKYTIQLGENELVLKELDLL+DDANV+KLIGPVLVKQDLAEANANVRKRIDYISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK
        RLDSALQDLEEKQNSKRDAILKLQQR QS QAGKAK
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK

A0A6J1K0L9 prefoldin subunit 6-like1.1e-5188.97Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        MSSTS +RELQRELESKANDLSKLQK        IAKNHQ+RKKYTIQLGENELVLKELDLL+DDANV+KLIGPVLVKQDLAEANANVRKRIDYISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK
        RLDSALQDLEEKQNSKRDAILKLQQR QS QAGKAK
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK

A0A6J1KLC2 prefoldin subunit 6-like1.2e-5391.97Show/hide
Query:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
        MSSTSAVRELQRELE+KANDLSKLQK        IAKNHQIRKKYTIQLGENELVLKEL+LLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
Subjt:  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK

Query:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV
        RLDSALQDLEEKQNSKRDAILKLQQRIQS QAGKAKV
Subjt:  RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV

SwissProt top hitse value%identityAlignment
O15212 Prefoldin subunit 61.7e-1743.65Show/hide
Query:  LQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDL
        +Q++L+ +     +LQK        ++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR+DYI+AE+KR +S L+DL
Subjt:  LQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDL

Query:  EEKQNSKRDAILKLQQRIQSQQAGKA
        E +   +R+ + +LQQ  Q  QA KA
Subjt:  EEKQNSKRDAILKLQQRIQSQQAGKA

Q03958 Prefoldin subunit 61.7e-1743.65Show/hide
Query:  LQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDL
        +Q++L+ +     +LQK        ++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR+DYI+AE+KR +S L+DL
Subjt:  LQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDL

Query:  EEKQNSKRDAILKLQQRIQSQQAGKA
        E +   +R+ + +LQQ  Q  QA KA
Subjt:  EEKQNSKRDAILKLQQRIQSQQAGKA

Q17Q89 Prefoldin subunit 61.0e-1743.65Show/hide
Query:  LQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDL
        +Q++L+ +     +LQK        ++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR+DYI+AE+KR +S L+DL
Subjt:  LQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDL

Query:  EEKQNSKRDAILKLQQRIQSQQAGKA
        E++   +R+ + +LQQ  Q  QA KA
Subjt:  EEKQNSKRDAILKLQQRIQSQQAGKA

Q5TJE6 Prefoldin subunit 61.7e-1743.65Show/hide
Query:  LQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDL
        +Q++L+ +     +LQK        ++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR+DYI+AE+KR +S L+DL
Subjt:  LQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDL

Query:  EEKQNSKRDAILKLQQRIQSQQAGKA
        E +   +R+ + +LQQ  Q  QA KA
Subjt:  EEKQNSKRDAILKLQQRIQSQQAGKA

Q9VW56 Probable prefoldin subunit 61.9e-1340.31Show/hide
Query:  STSAVRELQRELESKAN---DLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
        S +  +++Q E+ES  N      K+ K +++++S              QL EN+ VL EL+LL  D  VYKL GPVLVKQ+L E+  NV KRI+YIS EL
Subjt:  STSAVRELQRELESKAN---DLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL

Query:  KRLDSALQDLEEKQNSKRDAILKLQQRIQ
        K    AL+++E+     R+++ K QQ+ Q
Subjt:  KRLDSALQDLEEKQNSKRDAILKLQQRIQ

Arabidopsis top hitse value%identityAlignment
AT1G29990.1 prefoldin 61.1e-4877.61Show/hide
Query:  STSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRL
        S+S VR+LQR+LE+KANDL K+QK        I KNHQ+RKKYTIQLGENELVLKELDLL++DANVYKLIGPVLVKQDLAEANANVRKRI+YISAELKRL
Subjt:  STSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRL

Query:  DSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK
        D+ LQD+EEKQN+KR+ I+KLQQR+Q+ QAGKAK
Subjt:  DSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAACGGAGGAAGTCGACGATTCAGCGAGAATGAGTTCCACAAGTGCTGTTCGAGAGCTACAGCGCGAGCTGGAGTCGAAAGCCAACGATCTCAGCAAGCTACAGAAAGG
CAAGTCTCTAATCGATTCTCATATTGCGAAGAACCACCAAATTAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTCCTTAAGGAATTGGATCTACTTAAAG
ATGACGCAAATGTATATAAACTGATTGGTCCAGTTCTCGTGAAGCAAGATTTGGCAGAAGCAAATGCCAATGTTCGCAAGAGAATTGATTACATTTCTGCAGAATTGAAA
CGTCTTGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAAGAGAGATGCGATATTGAAGTTACAGCAGAGGATTCAATCTCAGCAGGCTGGAAAAGCTAAAGT
GTAA
mRNA sequenceShow/hide mRNA sequence
GCAACGGAGGAAGTCGACGATTCAGCGAGAATGAGTTCCACAAGTGCTGTTCGAGAGCTACAGCGCGAGCTGGAGTCGAAAGCCAACGATCTCAGCAAGCTACAGAAAGG
CAAGTCTCTAATCGATTCTCATATTGCGAAGAACCACCAAATTAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTCCTTAAGGAATTGGATCTACTTAAAG
ATGACGCAAATGTATATAAACTGATTGGTCCAGTTCTCGTGAAGCAAGATTTGGCAGAAGCAAATGCCAATGTTCGCAAGAGAATTGATTACATTTCTGCAGAATTGAAA
CGTCTTGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAAGAGAGATGCGATATTGAAGTTACAGCAGAGGATTCAATCTCAGCAGGCTGGAAAAGCTAAAGT
GTAACATGTTTTATTGTTGTTTTTCAGCTGTACTTCCTTAACTTCTGTTTTTCTTTTTGCTATCTCTCTTGTACCGTTAAAGTTACACTGCACACTCAAAAGCTTGACAA
TATTTAATTAGTTCGATTTTGATTATAGATACATGCACTTCCTATGTTGAACATTCGTATTTCTTGCAAAATAGTTAACGAGAACTCAGCATCTCCCAAAATATA
Protein sequenceShow/hide protein sequence
ATEEVDDSARMSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELDLLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELK
RLDSALQDLEEKQNSKRDAILKLQQRIQSQQAGKAKV