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Carg19932 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19932
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCarg_Chr13:6773246..6774652
RNA-Seq ExpressionCarg19932
SyntenyCarg19932
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583907.1 hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia]4.9e-12596.6Show/hide
Query:  MGEKMPPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSD
        MGEKMPPPPPPPSISLHSSFFSSLKQVEKRLK D+PSQRDALRPPSPRRA SLPVEI SSSS EESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSD
Subjt:  MGEKMPPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSD

Query:  LKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLAYL
        LKSESNSPNLIDCG NRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQY W GGGEAERLEPLRLAYL
Subjt:  LKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLAYL

Query:  LMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        LMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
Subjt:  LMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

KAG7019524.1 hypothetical protein SDJN02_18485 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-130100Show/hide
Query:  MGEKMPPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSD
        MGEKMPPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSD
Subjt:  MGEKMPPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSD

Query:  LKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLAYL
        LKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLAYL
Subjt:  LKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLAYL

Query:  LMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        LMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
Subjt:  LMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

XP_022927255.1 uncharacterized protein LOC111434155 [Cucurbita moschata]2.4e-12798.31Show/hide
Query:  MGEKMPPPPPP--PSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS
        MGEKMPPPPPP  PSISLHSSFFSSLKQVEKRLK DNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS
Subjt:  MGEKMPPPPPP--PSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS

Query:  SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA
        SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWI YFWTGGGEAERLEPLRLA
Subjt:  SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA

Query:  YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
Subjt:  YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

XP_023001462.1 uncharacterized protein LOC111495590 [Cucurbita maxima]3.2e-12496.2Show/hide
Query:  MGEKM--PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS
        MGEKM  PPPPPPPSISLHSSFFSSLKQVEKRLK DNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHL QTNT SSLQESSEPPPEFLSNS
Subjt:  MGEKM--PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS

Query:  SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA
        SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLG GDSFEE+ELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA
Subjt:  SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA

Query:  YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        YLLMGKAVFASNG D+CLEGLEFPSTVEDFLLNDPPA
Subjt:  YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

XP_023519908.1 uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo]7.9e-12394.14Show/hide
Query:  MGEKM----PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLS
        MGEKM    PPPPPPPSISLHSSFFSSLKQVEKRLK DNPSQRDALRPPSPRRAPSLPVEISSSSS EES+STPMYLHLPQTNT SSLQESSEPPPEFLS
Subjt:  MGEKM----PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLS

Query:  NSSDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLR
        NSSDLKSESNSPNLIDCGQ+RPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKE ERLNGWIQY W GGGEAERLEPLR
Subjt:  NSSDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLR

Query:  LAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        LAYLLMGKAVFASNG D+CLEGLEFPSTVEDFLLNDPPA
Subjt:  LAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein8.9e-8873.93Show/hide
Query:  PPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDL-----
        P P PP +SLHS+FFSSLKQVEKRLK D+ SQRD L PP     P LPV  +SSS+ E+SLSTPMYLH PQTNT+S+LQESS+ P EFLS+SS       
Subjt:  PPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDL-----

Query:  KSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLAYLL
        KSESN P  ID GQNR VDDIQRL+QLLGL DS +E+E GA++GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F  GG E +RLEPLRLAYLL
Subjt:  KSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLAYLL

Query:  MGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        +GKAVFASN  D CLEGLEFPSTVEDFLLNDPPA
Subjt:  MGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

A0A1S3B9V1 uncharacterized protein LOC1034875961.2e-9275.21Show/hide
Query:  MGEKM-PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEES-LSTPMYLHLPQTNTTSSLQESSEPPPEFLSN-
        MGEKM PPPPPPP +SLHS FFSSLKQVEKRLK D+ SQRD L PP     P +PV+ ++SSS EE  LSTPMYLH PQTNT+S+LQESS+PP EFLSN 
Subjt:  MGEKM-PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEES-LSTPMYLHLPQTNTTSSLQESSEPPPEFLSN-

Query:  ----SSDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLE
             S  KS SN PNLID GQNR +DDIQRL+QLLGL DS +E+ELG + GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F  GGGE +RLE
Subjt:  ----SSDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLE

Query:  PLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        PLRLAYLL+GKAVFASNG D CL+GLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

A0A5A7UHE6 Uncharacterized protein1.2e-9275.21Show/hide
Query:  MGEKM-PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEES-LSTPMYLHLPQTNTTSSLQESSEPPPEFLSN-
        MGEKM PPPPPPP +SLHS FFSSLKQVEKRLK D+ SQRD L PP     P +PV+ ++SSS EE  LSTPMYLH PQTNT+S+LQESS+PP EFLSN 
Subjt:  MGEKM-PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEES-LSTPMYLHLPQTNTTSSLQESSEPPPEFLSN-

Query:  ----SSDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLE
             S  KS SN PNLID GQNR +DDIQRL+QLLGL DS +E+ELG + GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++F  GGGE +RLE
Subjt:  ----SSDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLE

Query:  PLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        PLRLAYLL+GKAVFASNG D CL+GLEFPSTVEDFLLNDPPA
Subjt:  PLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

A0A6J1END4 uncharacterized protein LOC1114341551.1e-12798.31Show/hide
Query:  MGEKMPPPPPP--PSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS
        MGEKMPPPPPP  PSISLHSSFFSSLKQVEKRLK DNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS
Subjt:  MGEKMPPPPPP--PSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS

Query:  SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA
        SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWI YFWTGGGEAERLEPLRLA
Subjt:  SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA

Query:  YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
Subjt:  YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955901.6e-12496.2Show/hide
Query:  MGEKM--PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS
        MGEKM  PPPPPPPSISLHSSFFSSLKQVEKRLK DNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHL QTNT SSLQESSEPPPEFLSNS
Subjt:  MGEKM--PPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNS

Query:  SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA
        SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLG GDSFEE+ELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA
Subjt:  SDLKSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLA

Query:  YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA
        YLLMGKAVFASNG D+CLEGLEFPSTVEDFLLNDPPA
Subjt:  YLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAAAAATGCCGCCACCGCCACCGCCGCCGTCTATATCTCTGCACTCCAGTTTCTTTTCGTCTCTTAAGCAGGTCGAAAAACGCCTTAAATTTGACAATCCATC
GCAACGGGACGCTCTTCGTCCACCATCGCCACGAAGAGCACCGTCATTGCCAGTAGAAATCAGTTCTTCTTCATCGGTCGAAGAGTCCCTGAGCACTCCCATGTACCTTC
ATTTGCCCCAAACCAACACAACCTCCTCCTTACAAGAAAGCAGCGAACCGCCTCCCGAATTCCTCTCGAATTCCTCAGATCTGAAATCAGAATCGAATAGTCCGAATCTC
ATCGATTGTGGCCAAAACCGGCCTGTAGATGACATTCAACGGCTGGTTCAACTTCTAGGGTTAGGGGATTCGTTTGAAGAACAGGAATTGGGTGCTCGGAGTGGCTGTAA
TGGCTGTGAGGGTTGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCCTAAAAGGCCCCAAATGTGGAAAGGAGGTGGAGAGGCTAAATGGATGGATTCAGTACTTCTGGA
CTGGTGGCGGTGAAGCAGAGAGATTAGAGCCTCTTAGATTGGCGTATTTACTGATGGGGAAGGCTGTTTTTGCTTCTAATGGCAGCGATCATTGTTTGGAAGGATTGGAA
TTCCCTTCAACTGTAGAGGATTTCTTACTGAATGATCCTCCTGCATAA
mRNA sequenceShow/hide mRNA sequence
CATCGTGTGTATTGGCCATCCGAGACATTGCCGCAGCTTCATGGGTGAAAAAATGCCGCCACCGCCACCGCCGCCGTCTATATCTCTGCACTCCAGTTTCTTTTCGTCTC
TTAAGCAGGTCGAAAAACGCCTTAAATTTGACAATCCATCGCAACGGGACGCTCTTCGTCCACCATCGCCACGAAGAGCACCGTCATTGCCAGTAGAAATCAGTTCTTCT
TCATCGGTCGAAGAGTCCCTGAGCACTCCCATGTACCTTCATTTGCCCCAAACCAACACAACCTCCTCCTTACAAGAAAGCAGCGAACCGCCTCCCGAATTCCTCTCGAA
TTCCTCAGATCTGAAATCAGAATCGAATAGTCCGAATCTCATCGATTGTGGCCAAAACCGGCCTGTAGATGACATTCAACGGCTGGTTCAACTTCTAGGGTTAGGGGATT
CGTTTGAAGAACAGGAATTGGGTGCTCGGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCCTAAAAGGCCCCAAATGTGGAAAG
GAGGTGGAGAGGCTAAATGGATGGATTCAGTACTTCTGGACTGGTGGCGGTGAAGCAGAGAGATTAGAGCCTCTTAGATTGGCGTATTTACTGATGGGGAAGGCTGTTTT
TGCTTCTAATGGCAGCGATCATTGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTACTGAATGATCCTCCTGCATAATAATAGATGGAGAACTTGAAAA
TGGAAAGATGATTTTTCTACGTACTTTGGAGGAAAAGTGAAGTGATTCTGTATAAGATTTGGATATTGGGCAATTTTTTGTTGCATAATTGAAACATATTCAGATTATTT
GAATTATTCCAACGATTGAAAAGATAGGTTGATTTTGTGAATTTAGCAAGAAAATGGGAAGCTACGAGTATGGATAGAAATAGAAGGATACATTTATTAAAA
Protein sequenceShow/hide protein sequence
MGEKMPPPPPPPSISLHSSFFSSLKQVEKRLKFDNPSQRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDLKSESNSPNL
IDCGQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEAERLEPLRLAYLLMGKAVFASNGSDHCLEGLE
FPSTVEDFLLNDPPA