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Carg19943 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19943
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein TIFY 5A-like
Genome locationCarg_Chr13:6699811..6700278
RNA-Seq ExpressionCarg19943
SyntenyCarg19943
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583895.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]3.2e-5398.26Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
        MENILNCNLELCLSPPSSSPSTATATANS STSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGA+PSMRRSLQRFL
Subjt:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL

Query:  QKRKHRIQTLSPYSH
        QKRKHRIQTLSPYSH
Subjt:  QKRKHRIQTLSPYSH

KAG7019513.1 Protein TIFY 5A [Cucurbita argyrosperma subsp. argyrosperma]2.9e-54100Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
        MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
Subjt:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL

Query:  QKRKHRIQTLSPYSH
        QKRKHRIQTLSPYSH
Subjt:  QKRKHRIQTLSPYSH

XP_022927150.1 protein TIFY 5A-like [Cucurbita moschata]8.0e-5298.26Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
        MENILNCNLELCLSPPSSSPS  TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
Subjt:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL

Query:  QKRKHRIQTLSPYSH
        QKRKHRIQTLSPYSH
Subjt:  QKRKHRIQTLSPYSH

XP_023001493.1 protein TIFY 5A-like [Cucurbita maxima]3.4e-4286.32Show/hide
Query:  MENILNCNLELCLSPPSSSPST--ATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQR
        MENILNCNLELCLSPPSSSPST    A ANSTSTSCHNH  PTRVP+ D TELQARAIIVRA TQMEAERRLTTC+IS PT+ +SMKSGASPSMRRSLQR
Subjt:  MENILNCNLELCLSPPSSSPST--ATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQR

Query:  FLQKRKHRIQTLSPYSH
        FLQKRKHRIQTLSPYSH
Subjt:  FLQKRKHRIQTLSPYSH

XP_023520316.1 protein TIFY 5A-like [Cucurbita pepo subsp. pepo]8.0e-5297.39Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
        MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPD TELQARAIIVRATTQME ERRLTTCHISSP QRVSMKSGASPSMRRSLQRFL
Subjt:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL

Query:  QKRKHRIQTLSPYSH
        QKRKHRIQTLSPYSH
Subjt:  QKRKHRIQTLSPYSH

TrEMBL top hitse value%identityAlignment
A0A0A0LX13 Uncharacterized protein2.8e-2668.07Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATAT--ANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAER-RLTTCHISSPTQRVSMKSG-ASPSMRRSL
        ME + N NLELCLSPPSSSPST T+T    S STS  NHI P  +  PD TE+QA+AIIV+AT QMEAER R  TC ISS  +RV M +G ASPS+RRSL
Subjt:  MENILNCNLELCLSPPSSSPSTATAT--ANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAER-RLTTCHISSPTQRVSMKSG-ASPSMRRSL

Query:  QRFLQKRKHRIQTLSPYSH
        QRFLQKRK RIQTLSPY+H
Subjt:  QRFLQKRKHRIQTLSPYSH

A0A1S3BA64 protein TIFY 5A-like9.9e-3272.5Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATAT----ANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSG-ASPSMRRS
        ME+  N NLELCLSPPSSSPST T T    A S S+S HNHI P  VP PD TE+QA+AIIV AT QMEAERR TTC ISS  +RV M+SG ASPSMRRS
Subjt:  MENILNCNLELCLSPPSSSPSTATAT----ANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSG-ASPSMRRS

Query:  LQRFLQKRKHRIQTLSPYSH
        LQRFLQKRK RIQTLSPY+H
Subjt:  LQRFLQKRKHRIQTLSPYSH

A0A6J1CG02 protein TIFY 5A-like6.2e-1855.93Show/hide
Query:  ENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPT-----RVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSL
        ++ L+CNLELCLSPP + PS+ATA A ST+TS  +H  P        P+ D TELQARAII+ AT QM  E R TTC   S  ++       S SM+RSL
Subjt:  ENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPT-----RVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSL

Query:  QRFLQKRKHRIQTLSPYS
        QRFLQKRKHRIQTL+PY+
Subjt:  QRFLQKRKHRIQTLSPYS

A0A6J1EN30 protein TIFY 5A-like3.9e-5298.26Show/hide
Query:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
        MENILNCNLELCLSPPSSSPS  TATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL
Subjt:  MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFL

Query:  QKRKHRIQTLSPYSH
        QKRKHRIQTLSPYSH
Subjt:  QKRKHRIQTLSPYSH

A0A6J1KQP6 protein TIFY 5A-like1.6e-4286.32Show/hide
Query:  MENILNCNLELCLSPPSSSPST--ATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQR
        MENILNCNLELCLSPPSSSPST    A ANSTSTSCHNH  PTRVP+ D TELQARAIIVRA TQMEAERRLTTC+IS PT+ +SMKSGASPSMRRSLQR
Subjt:  MENILNCNLELCLSPPSSSPST--ATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQR

Query:  FLQKRKHRIQTLSPYSH
        FLQKRKHRIQTLSPYSH
Subjt:  FLQKRKHRIQTLSPYSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30135.1 jasmonate-zim-domain protein 81.3e-0436.29Show/hide
Query:  NCNLELCLSPPSSSPSTATATANSTSTSCHN---HIDPTRVPI---------PDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASP---
        NC+LEL L P S    ++  T+   STS  N   + +  R+ I          D T LQAR+II  A+ +M+   + ++     P +  S      P   
Subjt:  NCNLELCLSPPSSSPSTATATANSTSTSCHN---HIDPTRVPI---------PDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASP---

Query:  -SMRRSLQRFLQKRKHRIQTLSPY
         SM++SLQ FLQKRK RIQ  SPY
Subjt:  -SMRRSLQRFLQKRKHRIQTLSPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACATCCTCAACTGCAACTTGGAACTCTGTCTCTCTCCCCCTTCTTCCTCCCCTTCCACCGCCACCGCCACCGCCAATTCAACGTCGACATCTTGCCACAACCA
TATCGACCCTACTCGAGTCCCGATACCTGATCATACAGAGCTCCAGGCAAGGGCAATAATCGTACGAGCGACAACACAAATGGAGGCCGAGAGAAGATTAACGACATGTC
ATATTAGTTCACCGACGCAGCGGGTGTCGATGAAGAGTGGGGCTAGCCCCTCCATGAGAAGATCGTTGCAAAGATTTCTTCAGAAGAGAAAGCATCGCATTCAAACACTT
TCACCCTACTCTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATCTTTCAAACCTTAATTCACATTTTCTTCCTCTCCAATGGAAAACATCCTCAACTGCAACTTGGAACTCTGTCTCTCTCCCCCTTCTTCCTCCCCTTCCACCGCCACCG
CCACCGCCAATTCAACGTCGACATCTTGCCACAACCATATCGACCCTACTCGAGTCCCGATACCTGATCATACAGAGCTCCAGGCAAGGGCAATAATCGTACGAGCGACA
ACACAAATGGAGGCCGAGAGAAGATTAACGACATGTCATATTAGTTCACCGACGCAGCGGGTGTCGATGAAGAGTGGGGCTAGCCCCTCCATGAGAAGATCGTTGCAAAG
ATTTCTTCAGAAGAGAAAGCATCGCATTCAAACACTTTCACCCTACTCTCACTAG
Protein sequenceShow/hide protein sequence
MENILNCNLELCLSPPSSSPSTATATANSTSTSCHNHIDPTRVPIPDHTELQARAIIVRATTQMEAERRLTTCHISSPTQRVSMKSGASPSMRRSLQRFLQKRKHRIQTL
SPYSH