; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19963 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19963
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCopper transporter
Genome locationCarg_Chr03:4366457..4366867
RNA-Seq ExpressionCarg19963
SyntenyCarg19963
Gene Ontology termsGO:0006878 - cellular copper ion homeostasis (biological process)
GO:0035434 - copper ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005375 - copper ion transmembrane transporter activity (molecular function)
InterPro domainsIPR007274 - Ctr copper transporter


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603615.1 Copper transporter 6, partial [Cucurbita argyrosperma subsp. sororia]9.4e-68100Show/hide
Query:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
        MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
Subjt:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS

Query:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
Subjt:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

XP_022950132.1 copper transporter 2-like [Cucurbita moschata]7.9e-6799.26Show/hide
Query:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
        MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFS WPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
Subjt:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS

Query:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
Subjt:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

XP_022978313.1 copper transporter 2-like [Cucurbita maxima]1.7e-6496.32Show/hide
Query:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
        MESMPMSPPAMDGR TPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAF IEFLS T PTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
Subjt:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS

Query:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FNVGMFIAAVAGHSLGYFVVKLRALTAGKR+DCNEV
Subjt:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

XP_023545027.1 copper transporter 2-like [Cucurbita pepo subsp. pepo]3.0e-6697.79Show/hide
Query:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
        MESMPMSPPAMDGRDTPMMQMSFYWGK+AVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPV SASIQALVYAFRTGLAYLVMLAVMS
Subjt:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS

Query:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FNVGMFIAAVAGHSLGYFV+KLRALTAGKRSDCNEV
Subjt:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

XP_038883235.1 copper transporter 2-like [Benincasa hispida]1.6e-5174.34Show/hide
Query:  MESMPMSPPAMDGR--------DTPM--------MQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVY
        MESMPMSPPAMDG         D+PM        MQMSFYWGKDAVVLFSGWPK+S+G+YILAFFFIFLLAFA+EFLSHT P KL KSP+ SASIQA+VY
Subjt:  MESMPMSPPAMDGR--------DTPM--------MQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVY

Query:  AFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        AFRT L YLVMLAVMSFNVG+FIAAVAGH+LG+FVVK+RALT  K +D NEV
Subjt:  AFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

TrEMBL top hitse value%identityAlignment
A0A1S4DWU9 Copper transporter1.5e-4768.21Show/hide
Query:  MESMPMSPPAMDGR--------DTP-------MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYA
        M+SMPM PPAM+G         D+P        MQM+FYWGK+ V+LF GWPK+S+ +YILAFFFIFLLAFA+EFLSHT P KL KSPV  AS+QA +YA
Subjt:  MESMPMSPPAMDGR--------DTP-------MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYA

Query:  FRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FRTGLAYLVMLAVMSFN+G+FIAAVAGH+LG+FVVKLR LT  KR+D NEV
Subjt:  FRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

A0A5A7TSJ7 Copper transporter1.5e-4768.21Show/hide
Query:  MESMPMSPPAMDGR--------DTP-------MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYA
        M+SMPM PPAM+G         D+P        MQM+FYWGK+ V+LF GWPK+S+ +YILAFFFIFLLAFA+EFLSHT P KL KSPV  AS+QA +YA
Subjt:  MESMPMSPPAMDGR--------DTP-------MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYA

Query:  FRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FRTGLAYLVMLAVMSFN+G+FIAAVAGH+LG+FVVKLR LT  KR+D NEV
Subjt:  FRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

A0A6J1DB95 Copper transporter6.2e-4971.52Show/hide
Query:  MESMPMSPPAMDGRD---------------TPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYA
        M+SM MSPPAMDG                 T  MQMSFYWGKDAVVLFSGWPK+S+GMYILAFFFIFLLAF +EFLSHT P KL KSPV  ASIQA++YA
Subjt:  MESMPMSPPAMDGRD---------------TPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYA

Query:  FRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FRTGLAYLVMLAVMSFNVG+FIAAVAGH+LG+FVV++ ALT  KR+D  EV
Subjt:  FRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

A0A6J1GDY7 Copper transporter3.8e-6799.26Show/hide
Query:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
        MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFS WPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
Subjt:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS

Query:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
Subjt:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

A0A6J1ISP1 Copper transporter8.0e-6596.32Show/hide
Query:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
        MESMPMSPPAMDGR TPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAF IEFLS T PTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
Subjt:  MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMS

Query:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV
        FNVGMFIAAVAGHSLGYFVVKLRALTAGKR+DCNEV
Subjt:  FNVGMFIAAVAGHSLGYFVVKLRALTAGKRSDCNEV

SwissProt top hitse value%identityAlignment
Q39065 Copper transporter 11.2e-2050Show/hide
Query:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSAS------IQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVA
        MM M+F+WGK+  VLFSGWP  S GMY L   F+F LA   E+L+H   + L +   G ++      IQ  VY  R GLAYLVMLAVMSFN G+F+ A+A
Subjt:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSAS------IQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVA

Query:  GHSLGYFV
        GH++G+ +
Subjt:  GHSLGYFV

Q5ZD08 Copper transporter 39.9e-2047.58Show/hide
Query:  SMPMSPPAMD--GRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGS---ASIQALVYAFRTGLAYLVMLA
        +M M+P A    GR    M M+FYWGK++ +LF+GWP  S GMY LA   +F LA  +EFL    P     S +GS    +  A V+A R GLAYL+MLA
Subjt:  SMPMSPPAMD--GRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGS---ASIQALVYAFRTGLAYLVMLA

Query:  VMSFNVGMFIAAVAGHSLGYFVVK
        +MSFNVG+ +AAVAGH+ G+   +
Subjt:  VMSFNVGMFIAAVAGHSLGYFVVK

Q8GWP3 Copper transporter 68.9e-2145.38Show/hide
Query:  PMSPPAM---DGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTK-LPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
        P SP +M      +  MM M+F+WGK+  +LFSGWP  S+GMY+L    +FLLA  +E+L+H+   +    +      +Q  VY  +TGLAYLVMLAVMS
Subjt:  PMSPPAM---DGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTK-LPKSPVGSASIQALVYAFRTGLAYLVMLAVMS

Query:  FNVGMFIAAVAGHSLGYFV
        FN G+FI A+AG ++G+ +
Subjt:  FNVGMFIAAVAGHSLGYFV

Q9FGU8 Copper transporter 34.1e-1843.7Show/hide
Query:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGY
        MM M+F+WGK   VLF GWP  S+ MY +    IF+++   E LS     K   + +G   +Q  VY  R  L+YLVMLAVMSFN G+F+AA+AG  LG+
Subjt:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGY

Query:  FVVKLRALTAGKRSDCNEV
         +   RA  A   +   EV
Subjt:  FVVKLRALTAGKRSDCNEV

Q9STG2 Copper transporter 24.7e-2248.41Show/hide
Query:  MESMPMSPP---AMDGRDTP---MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASI-QALVYAFRTGLAYL
        M  MP   P   +M    TP   MM M+F+WGK+  VLFSGWP  S GMY L    IFLLA   E+L+H+   ++  S   +A + Q  VY  +TGL+YL
Subjt:  MESMPMSPP---AMDGRDTP---MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASI-QALVYAFRTGLAYL

Query:  VMLAVMSFNVGMFIAAVAGHSLGYFV
        VMLAVMSFN G+FI A+AG+ +G+F+
Subjt:  VMLAVMSFNVGMFIAAVAGHSLGYFV

Arabidopsis top hitse value%identityAlignment
AT2G26975.1 Ctr copper transporter family6.3e-2245.38Show/hide
Query:  PMSPPAM---DGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTK-LPKSPVGSASIQALVYAFRTGLAYLVMLAVMS
        P SP +M      +  MM M+F+WGK+  +LFSGWP  S+GMY+L    +FLLA  +E+L+H+   +    +      +Q  VY  +TGLAYLVMLAVMS
Subjt:  PMSPPAM---DGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTK-LPKSPVGSASIQALVYAFRTGLAYLVMLAVMS

Query:  FNVGMFIAAVAGHSLGYFV
        FN G+FI A+AG ++G+ +
Subjt:  FNVGMFIAAVAGHSLGYFV

AT2G37925.1 copper transporter 42.5e-1842.73Show/hide
Query:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFL---SHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHS
        ++  +FYWG +  VLFSGWP    GMY LA  F+F LAF  E+L   S     K     +   + +  +Y  ++G +YLV+LAV+SFN G+F+AA+ GH+
Subjt:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFL---SHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHS

Query:  LGYFVVKLRA
        LG+ V + RA
Subjt:  LGYFVVKLRA

AT3G46900.1 copper transporter 23.4e-2348.41Show/hide
Query:  MESMPMSPP---AMDGRDTP---MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASI-QALVYAFRTGLAYL
        M  MP   P   +M    TP   MM M+F+WGK+  VLFSGWP  S GMY L    IFLLA   E+L+H+   ++  S   +A + Q  VY  +TGL+YL
Subjt:  MESMPMSPP---AMDGRDTP---MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASI-QALVYAFRTGLAYL

Query:  VMLAVMSFNVGMFIAAVAGHSLGYFV
        VMLAVMSFN G+FI A+AG+ +G+F+
Subjt:  VMLAVMSFNVGMFIAAVAGHSLGYFV

AT5G59030.1 copper transporter 18.3e-2250Show/hide
Query:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSAS------IQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVA
        MM M+F+WGK+  VLFSGWP  S GMY L   F+F LA   E+L+H   + L +   G ++      IQ  VY  R GLAYLVMLAVMSFN G+F+ A+A
Subjt:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSAS------IQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVA

Query:  GHSLGYFV
        GH++G+ +
Subjt:  GHSLGYFV

AT5G59040.1 copper transporter 32.9e-1943.7Show/hide
Query:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGY
        MM M+F+WGK   VLF GWP  S+ MY +    IF+++   E LS     K   + +G   +Q  VY  R  L+YLVMLAVMSFN G+F+AA+AG  LG+
Subjt:  MMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGY

Query:  FVVKLRALTAGKRSDCNEV
         +   RA  A   +   EV
Subjt:  FVVKLRALTAGKRSDCNEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCATGCCCATGTCTCCTCCAGCCATGGATGGCAGAGACACTCCAATGATGCAGATGAGCTTCTACTGGGGCAAAGATGCAGTGGTTCTCTTTTCAGGGTGGCC
TAAACAGAGTGTTGGCATGTACATACTGGCCTTCTTCTTCATCTTCCTGCTGGCCTTCGCCATCGAGTTCTTGAGCCACACGCAGCCAACCAAGCTTCCCAAGAGCCCCG
TTGGCAGCGCCTCCATTCAGGCCCTCGTCTATGCTTTCAGGACAGGGTTGGCTTATCTGGTCATGTTGGCTGTTATGTCCTTCAACGTTGGGATGTTTATAGCGGCTGTG
GCAGGGCATAGTCTTGGATATTTTGTTGTCAAACTTCGTGCTCTTACTGCTGGAAAGAGGAGTGATTGTAATGAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCATGCCCATGTCTCCTCCAGCCATGGATGGCAGAGACACTCCAATGATGCAGATGAGCTTCTACTGGGGCAAAGATGCAGTGGTTCTCTTTTCAGGGTGGCC
TAAACAGAGTGTTGGCATGTACATACTGGCCTTCTTCTTCATCTTCCTGCTGGCCTTCGCCATCGAGTTCTTGAGCCACACGCAGCCAACCAAGCTTCCCAAGAGCCCCG
TTGGCAGCGCCTCCATTCAGGCCCTCGTCTATGCTTTCAGGACAGGGTTGGCTTATCTGGTCATGTTGGCTGTTATGTCCTTCAACGTTGGGATGTTTATAGCGGCTGTG
GCAGGGCATAGTCTTGGATATTTTGTTGTCAAACTTCGTGCTCTTACTGCTGGAAAGAGGAGTGATTGTAATGAAGTTTGA
Protein sequenceShow/hide protein sequence
MESMPMSPPAMDGRDTPMMQMSFYWGKDAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAV
AGHSLGYFVVKLRALTAGKRSDCNEV