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Carg19973 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19973
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SSUH2 homolog
Genome locationCarg_Chr03:4317583..4318235
RNA-Seq ExpressionCarg19973
SyntenyCarg19973
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603606.1 Protein SSUH2-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1266.67Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL++    +P    A TLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

KAG7033795.1 hypothetical protein SDJN02_03520, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-62100Show/hide
Query:  MKKTSNMNIQLFGKTSKANWEINRHNQYLEKNRLQHPPIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHIYENSYMGLSIVVVTDKLGY
        MKKTSNMNIQLFGKTSKANWEINRHNQYLEKNRLQHPPIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHIYENSYMGLSIVVVTDKLGY
Subjt:  MKKTSNMNIQLFGKTSKANWEINRHNQYLEKNRLQHPPIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHIYENSYMGLSIVVVTDKLGY

Query:  ILLMPNFPFIAGCKPLSNLP
        ILLMPNFPFIAGCKPLSNLP
Subjt:  ILLMPNFPFIAGCKPLSNLP

XP_022950703.1 protein SSUH2 homolog [Cucurbita moschata]1.7e-1266.67Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL++    +P    A TLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

XP_022978193.1 protein SSUH2 homolog [Cucurbita maxima]2.2e-1266.67Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL +    +P    A TLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

XP_023544518.1 protein SSUH2 homolog [Cucurbita pepo subsp. pepo]1.7e-1266.67Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL++    +P    A TLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

TrEMBL top hitse value%identityAlignment
A0A0A0L182 Uncharacterized protein2.9e-1062.12Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL      +P    A T VSVEEIRSAPNVS YYPPSLHGAL+SSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

A0A1S3BKY0 protein SSUH2 homolog1.7e-1063.64Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL      +P    A T VSVEEIRSAPNVS YYPPSLHGALVSSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

A0A5A7TQA4 Protein SSUH2-like protein1.7e-1063.64Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL      +P    A T VSVEEIRSAPNVS YYPPSLHGALVSSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

A0A6J1GFM3 protein SSUH2 homolog8.2e-1366.67Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL++    +P    A TLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

A0A6J1ISB4 protein SSUH2 homolog1.1e-1266.67Show/hide
Query:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG
        H QYL +    +P    A TLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPR   + Y+  Y G
Subjt:  HNQYLEKNRLQHP-PIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHI-YENSYMG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGACGTCAAACATGAATATCCAGCTATTCGGAAAGACATCGAAAGCGAATTGGGAGATCAATCGCCATAATCAGTACTTAGAGAAGAACAGGCTGCAACACCC
TCCGATTATTGCCAGAACCCTAGTTAGCGTCGAGGAAATTCGATCGGCGCCCAACGTTTCTGATTACTACCCGCCTTCTCTTCATGGCGCATTGGTTAGTTCGCCGGAGC
CTGATCCTAGAGGTACGCATATTTACGAGAACTCATACATGGGTTTATCAATAGTGGTTGTCACGGATAAGCTTGGTTATATACTACTTATGCCTAATTTTCCATTTATT
GCTGGTTGCAAGCCTCTTTCTAATCTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGACGTCAAACATGAATATCCAGCTATTCGGAAAGACATCGAAAGCGAATTGGGAGATCAATCGCCATAATCAGTACTTAGAGAAGAACAGGCTGCAACACCC
TCCGATTATTGCCAGAACCCTAGTTAGCGTCGAGGAAATTCGATCGGCGCCCAACGTTTCTGATTACTACCCGCCTTCTCTTCATGGCGCATTGGTTAGTTCGCCGGAGC
CTGATCCTAGAGGTACGCATATTTACGAGAACTCATACATGGGTTTATCAATAGTGGTTGTCACGGATAAGCTTGGTTATATACTACTTATGCCTAATTTTCCATTTATT
GCTGGTTGCAAGCCTCTTTCTAATCTTCCTTGA
Protein sequenceShow/hide protein sequence
MKKTSNMNIQLFGKTSKANWEINRHNQYLEKNRLQHPPIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHIYENSYMGLSIVVVTDKLGYILLMPNFPFI
AGCKPLSNLP