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Carg19978 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19978
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGTP--RNA guanylyltransferase
Genome locationCarg_Chr03:4274874..4275816
RNA-Seq ExpressionCarg19978
SyntenyCarg19978
Gene Ontology termsGO:0006266 - DNA ligation (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0006370 - 7-methylguanosine mRNA capping (biological process)
GO:0035335 - peptidyl-tyrosine dephosphorylation (biological process)
GO:0098507 - polynucleotide 5' dephosphorylation (biological process)
GO:0003910 - DNA ligase (ATP) activity (molecular function)
GO:0004484 - mRNA guanylyltransferase activity (molecular function)
GO:0004651 - polynucleotide 5'-phosphatase activity (molecular function)
GO:0004725 - protein tyrosine phosphatase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008138 - protein tyrosine/serine/threonine phosphatase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR013846 - mRNA capping enzyme, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603603.1 Protein DEFECTIVE IN EXINE FORMATION 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4492.93Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

KAG7033790.1 hypothetical protein SDJN02_03515, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-49100Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

XP_022950697.1 mRNA-capping enzyme-like isoform X1 [Cucurbita moschata]1.1e-4492.93Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

XP_022950699.1 mRNA-capping enzyme-like isoform X2 [Cucurbita moschata]1.1e-4492.93Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

XP_023543695.1 mRNA-capping enzyme-like isoform X2 [Cucurbita pepo subsp. pepo]1.1e-4492.93Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

TrEMBL top hitse value%identityAlignment
A0A1S3BKG4 GTP--RNA guanylyltransferase7.4e-4489.9Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDE+VWVCMRIRTDKTTPNDFNTY+KVMRSI+DNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

A0A6J1GFL6 GTP--RNA guanylyltransferase5.1e-4592.93Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

A0A6J1GGL8 GTP--RNA guanylyltransferase5.1e-4592.93Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

A0A6J1IK92 GTP--RNA guanylyltransferase6.7e-4591.92Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMR+RTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

A0A6J1ILU7 GTP--RNA guanylyltransferase6.7e-4591.92Show/hide
Query:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        M+ +   F DGDPSFYSGKIVECSWDSDERVWVCMR+RTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
Subjt:  MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR

SwissProt top hitse value%identityAlignment
O55236 mRNA-capping enzyme7.2e-0441.82Show/hide
Query:  YSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEI
        Y  KI+EC ++++   WV MR R DK+ PN +NT   V  SI + +T+E L + I
Subjt:  YSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEI

O60942 mRNA-capping enzyme1.5e-0443.64Show/hide
Query:  YSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEI
        Y  KI+EC ++++   WV MR RTDK+ PN +NT   V  SI + +T+E L + I
Subjt:  YSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEI

P40997 mRNA-capping enzyme subunit alpha1.7e-0546.03Show/hide
Query:  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMY
        S +IVEC  D DE  W  +R R DK   N  +T + V++SI+D +++EDLLKE+  IIR   Y
Subjt:  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMY

Q6CWR0 mRNA-capping enzyme subunit alpha1.1e-0432.93Show/hide
Query:  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEI-IRLPMYADRIRNDSKAAQHTNSTR
        +G+IVECS D +   W  +R R DK   N  +  +KV+ SI D+++ +DL + + E+  R       ++N  K   H  S R
Subjt:  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEI-IRLPMYADRIRNDSKAAQHTNSTR

Q6FQ31 mRNA-capping enzyme subunit alpha5.0e-0538.6Show/hide
Query:  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEI
        +G+IVEC+ D +   W  +R R DK   N  +  +KV+ SI D++T +DL + + EI
Subjt:  SGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEI

Arabidopsis top hitse value%identityAlignment
AT3G09100.2 mRNA capping enzyme family protein9.9e-3379.27Show/hide
Query:  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQ
        D DP+ YSGKIVECSWD DE+VWV MR+R DK+TPND NT+RKVMRSIKDNITEE LL+EI EIIRLPMYADRI+ DSKAA+
Subjt:  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQ

AT5G01290.1 mRNA capping enzyme family protein5.4e-3175.61Show/hide
Query:  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQ
        D DPS Y+GKIVEC+WD D++VW  MRIR DKTTPND NT RKV++SI DNITEE LL+EI EIIRLPMYADRIRNDS+AA+
Subjt:  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQ

AT5G28210.1 mRNA capping enzyme family protein1.8e-2153.33Show/hide
Query:  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR
        D D + Y GKIVECSWD +++VWV +RIR DK+ PN   T R V++ I+D++T+E LLKEI EII LPMY +RI ND+K A       R+
Subjt:  DGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCTCATTTTGAAACTTTTGCAGATGGCGACCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGCTCTTGGGATTCTGATGAACGAGTATGGGTCTGCATGCGTAT
CAGGACAGACAAAACAACTCCTAATGATTTCAATACATATAGAAAGGTTATGCGGAGCATTAAAGACAACATCACGGAGGAGGATTTGTTGAAGGAAATTCATGAGATCA
TACGCTTGCCTATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCCCAACATACGAATTCAACACGACGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCTCATTTTGAAACTTTTGCAGATGGCGACCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGCTCTTGGGATTCTGATGAACGAGTATGGGTCTGCATGCGTAT
CAGGACAGACAAAACAACTCCTAATGATTTCAATACATATAGAAAGGTTATGCGGAGCATTAAAGACAACATCACGGAGGAGGATTTGTTGAAGGAAATTCATGAGATCA
TACGCTTGCCTATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCCCAACATACGAATTCAACACGACGGAGGTGATGATAGCTAGACGATGCGATGCACAAATAC
AGAAATTAGGTAATCTTTGGATGAGATGCTCAAAAGGAGTTCCTACAGGATGTTGTTCGCCGTAGCTTTGCCTTGTTGCTATCTCATTGCACTTTATAGATGTTTTCAGT
TAGAGCTTTGAAATCCATTTTT
Protein sequenceShow/hide protein sequence
MKSHFETFADGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR