; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19991 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19991
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCarg_Chr03:4202847..4209575
RNA-Seq ExpressionCarg19991
SyntenyCarg19991
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR004910 - Yippee/Mis18/Cereblon
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily
IPR034751 - Yippee domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD5320917.1 unnamed protein product [Arabidopsis thaliana]1.9e-11957.68Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ
        MAT TAAA S   G R+ D RP + RVQARFG  FGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQ
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ

Query:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NLAKNVAGDIIG   ES+++K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+AVE LTGI WQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

Query:  ----------LQGEE----------------------------------------------------MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRT
                  L  E+                                                    MGRL +  LEG  YSCKHCKTHLA  +DIIS++
Subjt:  ----------LQGEE----------------------------------------------------MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRT

Query:  FHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSY-LASHDPQLAGSDGDDA
        FHC+HGKAYLFN + NV++GE E+R+++TG HTV DIFCV CGSI+GW+YE AH+K+QK           K+ GPDG++Y ++SH   + GSD DDA
Subjt:  FHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSY-LASHDPQLAGSDGDDA

KAG6603594.1 Chlorophyll a-b binding protein CP29.2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.9e-10598.47Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSS+TISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

KAG7033778.1 Chlorophyll a-b binding protein CP29.2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]5.4e-183100Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLILLQGE
        NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLILLQGE
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLILLQGE

Query:  EMGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPD
        EMGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPD
Subjt:  EMGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPD

Query:  GNSYLASHDPQLAGSDGDDA
        GNSYLASHDPQLAGSDGDDA
Subjt:  GNSYLASHDPQLAGSDGDDA

XP_022950626.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]2.7e-10598.98Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

XP_023544706.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita pepo subsp. pepo]1.0e-10498.47Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSP SKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

TrEMBL top hitse value%identityAlignment
A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic7.6e-9892.23Show/hide
Query:  ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++ PSS RVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        GDIIGTRFESA+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  GDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic7.6e-9892.23Show/hide
Query:  ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++ PSS RVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        GDIIGTRFESA+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  GDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

A0A6J1GFC4 Chlorophyll a-b binding protein, chloroplastic1.3e-10598.98Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

A0A6J1IPG0 Chlorophyll a-b binding protein, chloroplastic8.4e-10597.96Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        MATATAAATSSFIGTRLVDVRPSS RVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NVAGDIIGTRFE+ADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

A0A7G2EG64 Chlorophyll a-b binding protein, chloroplastic9.2e-12057.68Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ
        MAT TAAA S   G R+ D RP + RVQARFG  FGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQ
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ

Query:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NLAKNVAGDIIG   ES+++K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+AVE LTGI WQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

Query:  ----------LQGEE----------------------------------------------------MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRT
                  L  E+                                                    MGRL +  LEG  YSCKHCKTHLA  +DIIS++
Subjt:  ----------LQGEE----------------------------------------------------MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRT

Query:  FHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSY-LASHDPQLAGSDGDDA
        FHC+HGKAYLFN + NV++GE E+R+++TG HTV DIFCV CGSI+GW+YE AH+K+QK           K+ GPDG++Y ++SH   + GSD DDA
Subjt:  FHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSY-LASHDPQLAGSDGDDA

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like7.9e-4463.28Show/hide
Query:  MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK--------
        MGRL + TLEG  YSCKHC THLAL ++I+S++FHC+HGKAYLF+ +VNVT GE+E RM++TG+HTV DIFCV CGSI+GWKYE AH+KSQK        
Subjt:  MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK--------

Query:  --LKVLGPDGNSYLASHDPQLAGSDGDD
           K+ GPDG+ Y ASHD  +AGSD DD
Subjt:  --LKVLGPDGNSYLASHDPQLAGSDGDD

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic1.2e-8476.92Show/hide
Query:  TATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        +A AAA SS +GTR+   + P S R  A FGFGKKKA  KKS      +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN
Subjt:  TATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        +AGD+IGTR E+AD KSTPFQPYSEVFG+QRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELV+GSSYLGQPLPFS++TLIWIEVL++
Subjt:  VAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

Q93WD2 Chlorophyll a-b binding protein CP298.8e-4355.88Show/hide
Query:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTP--------FQPYSEVFGLQRFRECELIHGRWAM
        LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +       A V++TP          PYSEVFGL RFRECELIHGRWAM
Subjt:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTP--------FQPYSEVFGLQRFRECELIHGRWAM

Query:  LATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLILLQGEEMGRLLLTTLEGNFY
        LA LGAL  E  TG++W +AGKVEL +G+SY G  LPFS+T LIWIEV IL+ G E  R   T  E   Y
Subjt:  LATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLILLQGEEMGRLLLTTLEGNFY

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic2.8e-8175.5Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ
        MAT TAAA S   G R+ D RP + RVQARFG  FGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQ
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ

Query:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NLAKNVAGDIIG   ES+++K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+AVE LTGI WQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic1.2e-8478.57Show/hide
Query:  ATATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        AT+TAAA SS +GTR+V D+  +S+R  ARFGFG KKA  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAK
Subjt:  ATATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        N+ G++IGTR E+ D KSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGA+ VE LTG+TWQDAGKVELV+GSSYLGQPLPFS++TLIWIEVL++
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II2.0e-8275.5Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ
        MAT TAAA S   G R+ D RP + RVQARFG  FGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQ
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ

Query:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        NLAKNVAGDIIG   ES+++K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+AVE LTGI WQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVL++
Subjt:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

AT2G40100.2 light harvesting complex photosystem II1.4e-6772.83Show/hide
Query:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ
        MAT TAAA S   G R+ D RP + RVQARFG  FGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQ
Subjt:  MATATAAATSSFIGTRLVDVRPSSARVQARFG--FGKKK--APAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQ

Query:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVE
        NLAKNVAGDIIG   ES+++K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+AVE LTGI WQDAGKVE
Subjt:  NLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II5.4e-7274.32Show/hide
Query:  ATATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        AT+TAAA SS +GTR+V D+  +S+R  ARFGFG KKA  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAK
Subjt:  ATATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF
        N+ G++IGTR E+ D KSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGA+ VE LTG+TWQDAGKV  +  SS L   L F
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II8.6e-8678.57Show/hide
Query:  ATATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        AT+TAAA SS +GTR+V D+  +S+R  ARFGFG KKA  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAK
Subjt:  ATATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        N+ G++IGTR E+ D KSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGA+ VE LTG+TWQDAGKVELV+GSSYLGQPLPFS++TLIWIEVL++
Subjt:  NVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL

AT5G01530.1 light harvesting complex photosystem II8.6e-8676.92Show/hide
Query:  TATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        +A AAA SS +GTR+   + P S R  A FGFGKKKA  KKS      +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN
Subjt:  TATAAATSSFIGTRLV-DVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL
        +AGD+IGTR E+AD KSTPFQPYSEVFG+QRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELV+GSSYLGQPLPFS++TLIWIEVL++
Subjt:  VAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGTCGACGTGCGGCCGAGTTCCGCCCGAGTCCAAGCCCGATTCGGATTCGGTAAGAAAAA
AGCTCCAGCAAAGAAATCGCCGTCATCGAAGACGATATCCGACCGTCCGCTGTGGTTTCCGGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGCGACTACG
GATTCGATCCGTTCGGGCTGGGGAAACCAGCAGAGTATTTGCAGTACGATTTGGATTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATAATCGGGACGAGA
TTTGAGAGCGCCGACGTGAAATCGACGCCGTTTCAGCCGTACTCGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTGATCCATGGAAGATGGGCGATGTTGGC
CACACTCGGCGCTCTCGCCGTTGAAGGCCTCACTGGTATCACTTGGCAAGACGCCGGAAAGGTAGAATTAGTGGAAGGTTCGTCGTACCTTGGGCAGCCGCTGCCCTTCT
CCCTGACCACACTGATCTGGATCGAGGTTCTGATATTGCTGCAAGGAGAGGAGATGGGAAGGCTACTTTTGACTACTCTGGAAGGAAATTTTTATAGTTGCAAACACTGT
AAAACTCATCTCGCCCTTCAGAAAGACATAATTTCAAGGACTTTTCATTGCAGGCATGGGAAGGCGTACTTGTTTAATAACATTGTCAATGTCACAGTTGGAGAACTAGA
AAAGCGGATGTTGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGAGATTGCACATGACAAATCCCAAAAGT
TGAAGGTGTTGGGTCCTGATGGAAACAGCTACTTAGCAAGCCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
GCCGATCACAAGCCCCCTCTCTCAGCCACATAACAACCCAACCAGGATCCCAAATCCCATCTCACACTCTTCAATTCCCCTCTCAACTCATCGTCGCAATGGCCACCGCC
ACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGTCGACGTGCGGCCGAGTTCCGCCCGAGTCCAAGCCCGATTCGGATTCGGTAAGAAAAAAGCTCCAGCAAA
GAAATCGCCGTCATCGAAGACGATATCCGACCGTCCGCTGTGGTTTCCGGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGCGACTACGGATTCGATCCGT
TCGGGCTGGGGAAACCAGCAGAGTATTTGCAGTACGATTTGGATTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATAATCGGGACGAGATTTGAGAGCGCC
GACGTGAAATCGACGCCGTTTCAGCCGTACTCGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTGATCCATGGAAGATGGGCGATGTTGGCCACACTCGGCGC
TCTCGCCGTTGAAGGCCTCACTGGTATCACTTGGCAAGACGCCGGAAAGGTAGAATTAGTGGAAGGTTCGTCGTACCTTGGGCAGCCGCTGCCCTTCTCCCTGACCACAC
TGATCTGGATCGAGGTTCTGATATTGCTGCAAGGAGAGGAGATGGGAAGGCTACTTTTGACTACTCTGGAAGGAAATTTTTATAGTTGCAAACACTGTAAAACTCATCTC
GCCCTTCAGAAAGACATAATTTCAAGGACTTTTCATTGCAGGCATGGGAAGGCGTACTTGTTTAATAACATTGTCAATGTCACAGTTGGAGAACTAGAAAAGCGGATGTT
GATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGAGATTGCACATGACAAATCCCAAAAGTTGAAGGTGTTGG
GTCCTGATGGAAACAGCTACTTAGCAAGCCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGATCTGCTGTCGAGTTCGGAAGTAGATAAGACCTTCTTTCT
CCTTCTCCCATCCCCTTTTTCTTTGTTTCCATCTTATTATTGCCATTTAGCTCTTTCTTAAGCTTTTTGGTACACTGCCACTGCAGTTTTGGCTAGTAGCACAAGAACAA
CCTTCCTTTTCCAATTCATTGACTTTCAAATTTAAATTAAATGAATAATAATTTTTGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGA
TGTGGATCA
Protein sequenceShow/hide protein sequence
MATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTR
FESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLILLQGEEMGRLLLTTLEGNFYSCKHC
KTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPDGNSYLASHDPQLAGSDGDDA