; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20086 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20086
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionplastid transcriptionally active 6
Genome locationCarg_Chr09:3983932..3987592
RNA-Seq ExpressionCarg20086
SyntenyCarg20086
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.8e-192100Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]1.7e-17995.27Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSLPYRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_022935749.1 uncharacterized protein LOC111442572 [Cucurbita moschata]4.1e-18999.12Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL--A
        MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSL YRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL  A
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL--A

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_022976812.1 uncharacterized protein LOC111477076 [Cucurbita maxima]1.3e-18798.54Show/hide
Query:  MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL-
        MNSTVFLLSS  PLPPATIHRLRPPSISAASSL HLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL 
Subjt:  MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL-

Query:  -AAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
         AAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  -AAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_023534952.1 uncharacterized protein LOC111796527 [Cucurbita pepo subsp. pepo]5.4e-18999.11Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLSSPLPPATIHRLRPPSISAASSL HL S PYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876138.4e-18095.27Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSLPYRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5A7UA32 Uncharacterized protein2.7e-17894.97Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSLPYRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5J5BWI0 Uncharacterized protein9.0e-14275.15Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        M +T+ L   PL P  +     P ++  +SLH  P+L +    P  + +F PR + FRV++DDGD D GGPDDYDM ++E+EEVDNKKD+D+EYD LAAA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AA+A  G    GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YAIP+VLAP+PQKYIRCA
Subjt:  AAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
        +SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDR+ DLLV+RDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        S+R+DPTTVIE+EEW KTRQDMERHLRKLRDFS+SNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1F6A7 uncharacterized protein LOC1114425722.0e-18999.12Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL--A
        MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSL YRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL  A
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL--A

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1IGR4 uncharacterized protein LOC1114770766.4e-18898.54Show/hide
Query:  MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL-
        MNSTVFLLSS  PLPPATIHRLRPPSISAASSL HLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL 
Subjt:  MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL-

Query:  -AAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
         AAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  -AAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic1.6e-13281.23Show/hide
Query:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPP
        DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPP
Subjt:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPP

Query:  DPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKT
        DPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKT
Subjt:  DPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKT

Query:  KSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        KSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  KSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 61.2e-13381.23Show/hide
Query:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPP
        DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPP
Subjt:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPP

Query:  DPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKT
        DPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKT
Subjt:  DPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKT

Query:  KSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        KSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  KSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

AT1G21600.2 plastid transcriptionally active 61.2e-13381.23Show/hide
Query:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPP
        DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPP
Subjt:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPP

Query:  DPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKT
        DPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKT
Subjt:  DPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKT

Query:  KSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        KSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  KSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGTCTGCGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCACCACCTCCCTAGTTT
GCCCTACCGAAAATCTACTCCCTCTGCATCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGTGGCGGCCCCGATGACT
ACGATATGTACGACGACGAAATGGAAGAAGTCGATAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCCGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGC
GTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAACGAGGAGGAGTTTCATAA
GATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTGTACGATTTCAGAGAGATGTATGTTACTCCTCCTGACACTGATGTTTATG
CTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGCGCTCAGAGTGATTATGGATGTTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCA
TTATACAAGTCTGAGAAGGAGGTTCTTAAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGCTGGGTGACCCGGAATTCGTCCTAGACTTTGAGGAAATATATGTGAT
CGATTCAAAAACCAAGTCAATCACCAGGGCTAAAGTCTTGGTCACAGTTCCAGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACT
CTTTCAAGATTATCCATTCGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGG
GACTTCAGCATTTCAAATTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGTCTGCGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCACCACCTCCCTAGTTT
GCCCTACCGAAAATCTACTCCCTCTGCATCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGTGGCGGCCCCGATGACT
ACGATATGTACGACGACGAAATGGAAGAAGTCGATAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCCGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGC
GTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAACGAGGAGGAGTTTCATAA
GATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTGTACGATTTCAGAGAGATGTATGTTACTCCTCCTGACACTGATGTTTATG
CTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGCGCTCAGAGTGATTATGGATGTTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCA
TTATACAAGTCTGAGAAGGAGGTTCTTAAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGCTGGGTGACCCGGAATTCGTCCTAGACTTTGAGGAAATATATGTGAT
CGATTCAAAAACCAAGTCAATCACCAGGGCTAAAGTCTTGGTCACAGTTCCAGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACT
CTTTCAAGATTATCCATTCGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGG
GACTTCAGCATTTCAAATTGGTTTTAAACAACCATACAAAAGTTATGGTTTTGAAGTTTAAGCGTTGACATGAACGAGACATCCAGGTTACCCGTCACGACATTTCTCTC
GTGTGAGTTCTCGACAGATCTCCTGCTCCATGCCCTCGTGATAGGTAATGTTTTCGGTTACGGCTAGTTACTTACACTTGCAATGATTGATCTTTCGGGTTCGTTCTACT
CGCTTTCGTTCTTCGTCATCGTTAATCTAGGAAAGCTAGCTTTTTATAGATTTGTAATGCTTAGAAAAGAAAAAATGGTTGCATCTTTTGGCTGTTTGCTGCAGTTGTCG
GTTCTGTTTTGATTAACCATTTTAAGAAAATTTTGAATTCTTGTGTTATATGGGGTTAGAACTGCTGTGAACTGATGCAATTTGAAGCAAAGAAACATTCATAACTGTCC
AATGGTCTATAGCTTTCAGTGATGGTATTTTTCGATTACAAGGCAAGACCCTTTGGTCTTTGTGAAAACCTCTCTATGATAGACGCGTTTTATAATATTGAGGGGAAGTC
CTTGAAAGGAATGTCTAAAGATGACAATATCTGCTAGTGATGAGCTTGACCTGTTACAAATGGTATTAGAGCTAGACACCG
Protein sequenceShow/hide protein sequence
MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEG
VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDP
LYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLR
DFSISNWF