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Carg20092 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20092
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:4025433..4026414
RNA-Seq ExpressionCarg20092
SyntenyCarg20092
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591873.1 hypothetical protein SDJN03_14219, partial [Cucurbita argyrosperma subsp. sororia]5.5e-77100Show/hide
Query:  MLLGTFRSIVVHYSAGSSICAASKELKKAWSIHALEAAWILERLSSIVDNFNAHTIPIVIESDSSKTINLLNEGLPFGDSVAVVGYQLEVDSAVLKFCFA
        MLLGTFRSIVVHYSAGSSICAASKELKKAWSIHALEAAWILERLSSIVDNFNAHTIPIVIESDSSKTINLLNEGLPFGDSVAVVGYQLEVDSAVLKFCFA
Subjt:  MLLGTFRSIVVHYSAGSSICAASKELKKAWSIHALEAAWILERLSSIVDNFNAHTIPIVIESDSSKTINLLNEGLPFGDSVAVVGYQLEVDSAVLKFCFA

Query:  VATIVLVLPVIPSGPGLGYFIGPKRSWALRESGLKYRPRCRVGLVLGFFV
        VATIVLVLPVIPSGPGLGYFIGPKRSWALRESGLKYRPRCRVGLVLGFFV
Subjt:  VATIVLVLPVIPSGPGLGYFIGPKRSWALRESGLKYRPRCRVGLVLGFFV
XP_023535970.1 uncharacterized protein LOC111797246 [Cucurbita pepo subsp. pepo]1.7e-6295.56Show/hide
Query:  MLLGTFRSIVVHYSAGSSICAASKELKKAWSIHALEAAWILERLSSIVDNFNAHTIPIVIESDSSKTINLLNEGLPFGDSVAVVGYQLEVDSAVLKFCFA
        MLLGTFRSIVVHYSAGSSICAASKELKKAWSIHALEAA ILERLSSIVDNFNAHTIPIVIESDSSK INLLNEGLP GDSVAVVGYQ EVDSAVL FCFA
Subjt:  MLLGTFRSIVVHYSAGSSICAASKELKKAWSIHALEAAWILERLSSIVDNFNAHTIPIVIESDSSKTINLLNEGLPFGDSVAVVGYQLEVDSAVLKFCFA

Query:  VATIVLVLPVIPSGPGLGYFIGPKRSWALRESGLK
        VATIVLVLPVIPSGPGLGYFIGPKR WALRESGLK
Subjt:  VATIVLVLPVIPSGPGLGYFIGPKRSWALRESGLK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTGGAACGTTTCGCTCGATCGTGGTTCATTACTCCGCTGGTTCATCGATCTGCGCTGCCTCAAAAGAGCTCAAGAAAGCTTGGTCGATTCATGCTCTTGAAGC
TGCTTGGATTCTTGAGAGGTTATCCTCCATTGTTGATAATTTCAACGCTCACACGATACCTATTGTGATTGAATCGGATTCCTCAAAGACAATTAATCTCCTGAATGAGG
GATTGCCATTTGGAGACTCCGTTGCGGTGGTCGGTTACCAGCTCGAGGTCGATTCCGCCGTTCTGAAATTCTGTTTCGCCGTCGCCACCATCGTTCTCGTCCTACCAGTG
ATACCGAGCGGGCCGGGTTTGGGCTATTTTATTGGGCCCAAAAGATCATGGGCTTTAAGAGAAAGTGGGCTGAAGTATAGGCCTAGATGTCGCGTGGGCTTGGTTTTGGG
CTTTTTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
TTCTTTGGAATTGTAGCAACTCCAAACGAATTTGAGTTGCATTCCTTCCACAATCTTACAATTTATTAGGTTTATGTGGGGATCTTGGAGTGCTAAAGACTATCAGAATC
GGTTTCAAGCTAATTCAAGCATTTTCAATTTGGAATTACCACAACAAGATTAATTCAATTGGTTTCCTTCCAGTTTTTCATCATTTGTTCCTAGTTATTGATAAATCTTC
GACAAATTCAATTAGAAGCTGAGATTCTTACCTGAAGTCAGTTTCGAGAGAGATCCCACCGAGTCTGTTCGTAGGTCTCCTCCGCCAGAAAACGTCTGGAAGCTCAATAT
GGATGCTTCTTGGAACGTTTCGCTCGATCGTGGTTCATTACTCCGCTGGTTCATCGATCTGCGCTGCCTCAAAAGAGCTCAAGAAAGCTTGGTCGATTCATGCTCTTGAA
GCTGCTTGGATTCTTGAGAGGTTATCCTCCATTGTTGATAATTTCAACGCTCACACGATACCTATTGTGATTGAATCGGATTCCTCAAAGACAATTAATCTCCTGAATGA
GGGATTGCCATTTGGAGACTCCGTTGCGGTGGTCGGTTACCAGCTCGAGGTCGATTCCGCCGTTCTGAAATTCTGTTTCGCCGTCGCCACCATCGTTCTCGTCCTACCAG
TGATACCGAGCGGGCCGGGTTTGGGCTATTTTATTGGGCCCAAAAGATCATGGGCTTTAAGAGAAAGTGGGCTGAAGTATAGGCCTAGATGTCGCGTGGGCTTGGTTTTG
GGCTTTTTTGTTTAACCCATTTGAAGCATAGAGATTTACAACGAAACCCATCCAATTTGAGTACCTCCACATGATAAAGTAGTTCCACACCTTAATTTTGACCTCTCATT
GACCTTAATTATTGACCTC
Protein sequenceShow/hide protein sequence
MLLGTFRSIVVHYSAGSSICAASKELKKAWSIHALEAAWILERLSSIVDNFNAHTIPIVIESDSSKTINLLNEGLPFGDSVAVVGYQLEVDSAVLKFCFAVATIVLVLPV
IPSGPGLGYFIGPKRSWALRESGLKYRPRCRVGLVLGFFV