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Carg20113 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20113
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCAP-Gly domain-containing linker protein 1-like
Genome locationCarg_Chr14:12126076..12128307
RNA-Seq ExpressionCarg20113
SyntenyCarg20113
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018617.1 hypothetical protein SDJN02_20487 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-64100Show/hide
Query:  MADADSSSPSAAVPAPLSAELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQD
        MADADSSSPSAAVPAPLSAELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQD
Subjt:  MADADSSSPSAAVPAPLSAELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQD

Query:  VSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        VSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
Subjt:  VSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

XP_008438879.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo]6.6e-4879.35Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSA             ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVD NET+HQHPA    KEDA EA K+  G TEEKGNEA N
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

XP_022956216.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata]1.2e-6090.32Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPSAAVPAPLSA             ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEIS+KEDAGEATKEG GSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

XP_022979959.1 CAP-Gly domain-containing linker protein 1 [Cucurbita maxima]3.7e-5988.39Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPS   PAPLSA             ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEIS+KEDAGEATKEG GSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

XP_023527984.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]1.1e-5888.39Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPSAA PAPLSA             ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEIS KEDA EATKEG GSTEEKGNE GN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

TrEMBL top hitse value%identityAlignment
A0A1S3AXE8 CAP-Gly domain-containing linker protein 1 isoform X17.9e-4778.85Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSA             ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLG-LQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLG LQDVSVD NET+HQHPA    KEDA EA K+  G TEEKGNEA N
Subjt:  DVTTSLRNLG-LQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

A0A1S3AY29 CAP-Gly domain-containing linker protein 1 isoform X23.2e-4879.35Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSA             ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVD NET+HQHPA    KEDA EA K+  G TEEKGNEA N
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

A0A5D3D134 CAP-Gly domain-containing linker protein 1 isoform X23.2e-4879.35Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSA             ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVD NET+HQHPA    KEDA EA K+  G TEEKGNEA N
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

A0A6J1GVY7 CAP-Gly domain-containing linker protein 1-like5.6e-6190.32Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPSAAVPAPLSA             ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEIS+KEDAGEATKEG GSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

A0A6J1IY17 CAP-Gly domain-containing linker protein 11.8e-5988.39Show/hide
Query:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MADADSSSPS   PAPLSA             ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADADSSSPSAAVPAPLSA-------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN
        DVTTSLRNLGLQDVSVDNNETRHQHPAEIS+KEDAGEATKEG GSTEEKGNEAGN
Subjt:  DVTTSLRNLGLQDVSVDNNETRHQHPAEISKKEDAGEATKEGSGSTEEKGNEAGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15790.1 unknown protein3.7e-2551.72Show/hide
Query:  MADADSSSPSAAVPAPLSA-----------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQ
        MAD  S S S   P  +S+                 ELNESRAELLNRIQ+LKQDLQ+WR KLDTQV  YR ELS LKK+LN+EVE LR EF++L+TTL 
Subjt:  MADADSSSPSAAVPAPLSA-----------------ELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQ

Query:  QQQEDVTTSLRNLGLQD--VSVD-NNETRHQHPAEISKKEDAGEA
        QQQ+DV+ SL++LGLQD    +D  +E   +    +S  ++A EA
Subjt:  QQQEDVTTSLRNLGLQD--VSVD-NNETRHQHPAEISKKEDAGEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGCCGACTCTTCCTCTCCCTCCGCCGCTGTCCCAGCTCCTCTATCGGCTGAATTGAACGAATCAAGAGCGGAGTTGCTTAATAGAATTCAATCTCTTAAGCA
GGATCTTCAGAATTGGAGGTCAAAGCTAGACACGCAAGTTAATACCTACCGGAGTGAACTCTCTGAACTCAAGAAATCACTTAATGTTGAGGTCGAGCACCTTCGAACGG
AATTCCAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGACGTGACTACCAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCCGTGGACAATAACGAGACTCGACAT
CAACATCCAGCAGAAATCAGCAAGAAGGAAGATGCAGGCGAGGCAACGAAGGAAGGTAGTGGCTCGACGGAGGAAAAGGGGAATGAAGCTGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
TAATTTTCCTCTCTTCTCTTTCCTCCATTTTTTGAATTTCGATTTCATCCCATCCCCTTCTCAAAACCCTAATTTTCAGTTCAACAGATTCGGTTCCATTCGATCCCTGC
TTCTATGGCGGACGCCGACTCTTCCTCTCCCTCCGCCGCTGTCCCAGCTCCTCTATCGGCTGAATTGAACGAATCAAGAGCGGAGTTGCTTAATAGAATTCAATCTCTTA
AGCAGGATCTTCAGAATTGGAGGTCAAAGCTAGACACGCAAGTTAATACCTACCGGAGTGAACTCTCTGAACTCAAGAAATCACTTAATGTTGAGGTCGAGCACCTTCGA
ACGGAATTCCAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGACGTGACTACCAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCCGTGGACAATAACGAGACTCG
ACATCAACATCCAGCAGAAATCAGCAAGAAGGAAGATGCAGGCGAGGCAACGAAGGAAGGTAGTGGCTCGACGGAGGAAAAGGGGAATGAAGCTGGAAATTAAGAGGCAC
TTTGTAGCATGTAGGTTGTAAGTTTTTCATTGCATGATAAGATAACATTAGCAGCAGCTCTCTCGGCTATGGATTTCCACAATGTTTACTGTTTAAATGTCAATGCTTGT
AATGGGTTTCTTTTCAATATTTCCCATTGAGGGTTCTATGAGATCTCCCTTTAGCTCACTCTCTACCTCTATCCTTCTCTCTAAACAACTTAATGATGGTCGAGTTTTGA
ACTTAATTTCTATTTAGTGCTTTCGAACGCTTAAATTTTTCATCATTGAGATTTGAATTTAGTTGTATTTGGTCGTCGAAGTTCCAAAGGTAACAGGTTGGATTCTCAAA
ATTTGAATTTGATTTCTCAAATTTGAAATCAATTTTAAAATGGTTCGTTGA
Protein sequenceShow/hide protein sequence
MADADSSSPSAAVPAPLSAELNESRAELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNETRH
QHPAEISKKEDAGEATKEGSGSTEEKGNEAGN