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Carg20114 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20114
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationCarg_Chr14:12130540..12130872
RNA-Seq ExpressionCarg20114
SyntenyCarg20114
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049489.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa]2.4e-4581.74Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDI
        MSGVW+FDNGVIRLVERAGA ET      G  G+RKVL+YTPTNEAMTSY VL+NKL+ LGWEVYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDI
Subjt:  MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDI

Query:  VVKNRNVFQVKDMQS
        VV+NRN+FQVKDMQS
Subjt:  VVKNRNVFQVKDMQS

KGN57101.1 hypothetical protein Csa_010574 [Cucumis sativus]1.6e-4685.71Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVK
        MSGVW+FDNGVIRLVERAGAAET   G  G+RKVLIYTPTNEAMTSY VL+NKL+ LGWEVYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+
Subjt:  MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVK

Query:  NRNVFQVKDMQS
        NRN+FQVKDMQS
Subjt:  NRNVFQVKDMQS

XP_022956217.1 flowering-promoting factor 1-like protein 1 [Cucurbita moschata]7.4e-55100Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
        MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN

Query:  VFQVKDMQSQ
        VFQVKDMQSQ
Subjt:  VFQVKDMQSQ

XP_022979994.1 flowering-promoting factor 1-like protein 1 [Cucurbita maxima]1.8e-5398.18Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
        MSGVWVFDNGVIRLVERAGA ETGAGGRRKVLIYTPTNEAMTSY VLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN

Query:  VFQVKDMQSQ
        VFQVKDMQSQ
Subjt:  VFQVKDMQSQ

XP_023528953.1 flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]6.2e-5497.27Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
        MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIY PTNEAMTSYP+LKNKLASLGWEVYYEDSEVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVVKNRN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN

Query:  VFQVKDMQSQ
        VFQVKDMQSQ
Subjt:  VFQVKDMQSQ

TrEMBL top hitse value%identityAlignment
A0A0A0LAK6 Uncharacterized protein7.9e-4785.71Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVK
        MSGVW+FDNGVIRLVERAGAAET   G  G+RKVLIYTPTNEAMTSY VL+NKL+ LGWEVYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDIVV+
Subjt:  MSGVWVFDNGVIRLVERAGAAET---GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVK

Query:  NRNVFQVKDMQS
        NRN+FQVKDMQS
Subjt:  NRNVFQVKDMQS

A0A5A7U7L7 Flowering-promoting factor 1-like protein 31.1e-4581.74Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDI
        MSGVW+FDNGVIRLVERAGA ET      G  G+RKVL+YTPTNEAMTSY VL+NKL+ LGWEVYYED EVMQFHKPSSVDLIS+P DFNKLKARHLYDI
Subjt:  MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDI

Query:  VVKNRNVFQVKDMQS
        VV+NRN+FQVKDMQS
Subjt:  VVKNRNVFQVKDMQS

A0A6J1GVQ4 flowering-promoting factor 1-like protein 13.6e-55100Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
        MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN

Query:  VFQVKDMQSQ
        VFQVKDMQSQ
Subjt:  VFQVKDMQSQ

A0A6J1IC95 flowering-promoting factor 1-like protein 24.7e-3974.55Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
        MSGVWVFDNGVIRL E  G +       R VLIYT TNEAMT+  VLKNKL SLGWE+YYED+E++QFHKPSSVDLIS+PTDFNK+KARHLYD+VV+NRN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN

Query:  VFQVKDMQSQ
        +F VKDMQSQ
Subjt:  VFQVKDMQSQ

A0A6J1IY48 flowering-promoting factor 1-like protein 18.8e-5498.18Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
        MSGVWVFDNGVIRLVERAGA ETGAGGRRKVLIYTPTNEAMTSY VLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRN

Query:  VFQVKDMQSQ
        VFQVKDMQSQ
Subjt:  VFQVKDMQSQ

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 14.0e-2754.63Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY--EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKN
        MSGVWVF NGVIRLVE    + +    RRKV++Y PT E ++SY  L+  L SLGWE Y+   D++++QFHK SS+DLIS+P DF K  + ++YDIVVKN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY--EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKN

Query:  RNVFQVKD
         N F V+D
Subjt:  RNVFQVKD

O24340 Flowering-promoting factor 15.2e-2754.63Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY--EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKN
        MSGVWVF NGVIRLVE    +      RRKV++Y PT E ++SY  L+  L SLGWE Y+   D++++QFHK SS+DLIS+P DF K  + ++YDIVVKN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY--EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKN

Query:  RNVFQVKD
         N F V+D
Subjt:  RNVFQVKD

Q0E1D7 Flowering-promoting factor 1-like protein 33.6e-2853.57Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDI
        M+GVWVF +G++R VE  G+ E+      G GGRRKVL++ P+ E + SY VL+ +L  LGWE Y  D  ++QFH+ S+V LISVP DF+K K  H+YDI
Subjt:  MSGVWVFDNGVIRLVERAGAAET------GAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDI

Query:  VVKNRNVFQVKD
        VVK RNVF+V+D
Subjt:  VVKNRNVFQVKD

Q9LGE3 Flowering-promoting factor 1-like protein 15.5e-2956.48Show/hide
Query:  MSGVWVFDNGVIRLVER--AGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKN
        MSGVWVF NGV+RLVE+  A A    AGGRRK L++TP+ + ++SY  L+ +L +LGWE YYED  + QFHK  S+DLIS+P DF+   + H+YDIVVKN
Subjt:  MSGVWVFDNGVIRLVER--AGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKN

Query:  RNVFQVKD
        R+ F+V D
Subjt:  RNVFQVKD

Q9LXB5 Flowering-promoting factor 1-like protein 22.7e-2857.27Show/hide
Query:  MSGVWVFDNGVIRLVE---RAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYE-DSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVV
        MSGVWVF+NGVIRLVE   ++G   T + GRR VL+Y PT EA++SY  L+  L SLGWE Y+  DS+++Q+HK SS+DLIS+P DF+K  + ++YDIVV
Subjt:  MSGVWVFDNGVIRLVE---RAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYE-DSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVV

Query:  KNRNVFQVKD
        KN N F V+D
Subjt:  KNRNVFQVKD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.9e-2447.58Show/hide
Query:  MSGVWVFD-NGVIRLVER------AGAAETGAGG-------RRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY---EDSEVMQFHKPSSVDLISVPTDF
        MSGVWVF+ NGV+RLVE         ++E+ + G       RRK+L++ P++E ++SY  L+  L +LGWE YY       ++QFHK +S+DLIS+P DF
Subjt:  MSGVWVFD-NGVIRLVER------AGAAETGAGG-------RRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY---EDSEVMQFHKPSSVDLISVPTDF

Query:  NKLKARHLYDIVVKNRNVFQVKDM
        +K  + H+YDIVVKN NVF V+DM
Subjt:  NKLKARHLYDIVVKNRNVFQVKDM

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.9e-2957.27Show/hide
Query:  MSGVWVFDNGVIRLVE---RAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYE-DSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVV
        MSGVWVF+NGVIRLVE   ++G   T + GRR VL+Y PT EA++SY  L+  L SLGWE Y+  DS+++Q+HK SS+DLIS+P DF+K  + ++YDIVV
Subjt:  MSGVWVFDNGVIRLVE---RAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYE-DSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVV

Query:  KNRNVFQVKD
        KN N F V+D
Subjt:  KNRNVFQVKD

AT5G24860.1 flowering promoting factor 12.8e-2854.63Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY--EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKN
        MSGVWVF NGVIRLVE    + +    RRKV++Y PT E ++SY  L+  L SLGWE Y+   D++++QFHK SS+DLIS+P DF K  + ++YDIVVKN
Subjt:  MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYY--EDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKN

Query:  RNVFQVKD
         N F V+D
Subjt:  RNVFQVKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCGTTTGGGTGTTCGACAACGGGGTAATTCGGCTCGTGGAGAGGGCGGGGGCGGCGGAGACGGGAGCAGGAGGGCGGAGAAAAGTTCTGATCTACACACCGAC
GAACGAGGCGATGACATCATACCCAGTACTTAAAAACAAGCTTGCATCGTTGGGCTGGGAAGTATACTACGAAGATTCCGAGGTTATGCAATTCCATAAGCCTTCATCTG
TGGATCTCATTTCTGTTCCCACAGACTTCAATAAGCTTAAGGCTAGACACTTATACGACATCGTTGTGAAGAATCGTAATGTTTTTCAAGTTAAGGACATGCAATCCCAG
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGCGTTTGGGTGTTCGACAACGGGGTAATTCGGCTCGTGGAGAGGGCGGGGGCGGCGGAGACGGGAGCAGGAGGGCGGAGAAAAGTTCTGATCTACACACCGAC
GAACGAGGCGATGACATCATACCCAGTACTTAAAAACAAGCTTGCATCGTTGGGCTGGGAAGTATACTACGAAGATTCCGAGGTTATGCAATTCCATAAGCCTTCATCTG
TGGATCTCATTTCTGTTCCCACAGACTTCAATAAGCTTAAGGCTAGACACTTATACGACATCGTTGTGAAGAATCGTAATGTTTTTCAAGTTAAGGACATGCAATCCCAG
TAA
Protein sequenceShow/hide protein sequence
MSGVWVFDNGVIRLVERAGAAETGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQSQ