; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20121 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20121
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnucleolar protein 58
Genome locationCarg_Chr14:12158679..12160370
RNA-Seq ExpressionCarg20121
SyntenyCarg20121
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582225.1 hypothetical protein SDJN03_22227, partial [Cucurbita argyrosperma subsp. sororia]7.1e-6775.24Show/hide
Query:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSS              
Subjt:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQ--KNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGV
                                           SGTNIRHVDTFDDPEASFDDGEAMNSEPKKQ  KNKNKKNKKNKNKKTKKNKRQKKIVEDSGC V
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQ--KNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGV

Query:  GKRPKKKLKL
        GKRPKKKLKL
Subjt:  GKRPKKKLKL
KAG7018625.1 hypothetical protein SDJN02_20495 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-103100Show/hide
Query:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
Subjt:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
        LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK

Query:  RPKKKLKL
        RPKKKLKL
Subjt:  RPKKKLKL
XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]1.7e-6875.96Show/hide
Query:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLS+INPQILELAVRNAKASVLSS              
Subjt:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
                                           SGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK

Query:  RPKKKLKL
        RPKKKLKL
Subjt:  RPKKKLKL
XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]9.3e-6775.48Show/hide
Query:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLS+INPQILELAVRNAKASVLSS              
Subjt:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
                                           SGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQ KIVEDSGCGVGK
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK

Query:  RPKKKLKL
        RPKKKLKL
Subjt:  RPKKKLKL
XP_023527659.1 uncharacterized protein LOC111790822 isoform X1 [Cucurbita pepo subsp. pepo]3.5e-6675Show/hide
Query:  MEDLSEEERRALRGSKFAPLPSQPT-SSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        MEDLSEEERRALRGSKFAPLPSQPT SSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLS+INPQILELAVRNAKASVLSS              
Subjt:  MEDLSEEERRALRGSKFAPLPSQPT-SSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
                                           SGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNK+QKKIVEDSGCGVGK
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK

Query:  RPKKKLKL
        RPKKKLKL
Subjt:  RPKKKLKL
TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein1.4e-5265.87Show/hide
Query:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKL+QDPN LS+INPQIL+LAVRNAKASV S               
Subjt:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
                                           SGTNIRHVDTFDDPEASFD+GE+MNSEPKKQK KNKK KKNKN   KKNKRQ KIVEDS CGVG 
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK

Query:  RPKKKLKL
        +PKKKL+L
Subjt:  RPKKKLKL
A0A1S3AY37 uncharacterized protein LOC1034838324.5e-5165.37Show/hide
Query:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        +MEDL+EEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDPN  S+INPQIL+LAVRNAKASV S               
Subjt:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
                                           SGTNIRHVDTFDDPEASFD+GE+MNSEPKKQK KNKK KKNKN   KKNKRQ KIVEDS CGVGK
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK

Query:  RPKKK
         P  K
Subjt:  RPKKK
A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X18.2e-6975.96Show/hide
Query:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLS+INPQILELAVRNAKASVLSS              
Subjt:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
                                           SGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK

Query:  RPKKKLKL
        RPKKKLKL
Subjt:  RPKKKLKL
A0A6J1GY51 uncharacterized protein LOC111457905 isoform X24.5e-6775.48Show/hide
Query:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL
        MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLS+INPQILELAVRNAKASVLSS              
Subjt:  MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFL

Query:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK
                                           SGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQ KIVEDSGCGVGK
Subjt:  LVVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGK

Query:  RPKKKLKL
        RPKKKLKL
Subjt:  RPKKKLKL
A0A6J1IUT6 uncharacterized protein LOC1114794943.6e-6474.4Show/hide
Query:  MEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFLL
        MEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLS+INPQILELAVRNAKASVLSS               
Subjt:  MEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFLL

Query:  VVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGKR
                                          SGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNK  KNKKTKKNKRQ KIVEDSGCGVGKR
Subjt:  VVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGKR

Query:  PKKKLKL
        PKKKLKL
Subjt:  PKKKLKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein1.8e-3146.86Show/hide
Query:  EDLSEEERRALRGSKFAPLPSQPTSSRSH-PRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFLL
        E+L+E+E+RALRGSKFAPL S P+SSRS  PRLAHPGGPLKTNKAAALAKFL+RKL QDPNGL++I+P ++ELAV+NAK +V+SS               
Subjt:  EDLSEEERRALRGSKFAPLPSQPTSSRSH-PRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFLL

Query:  VVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGKR
                                        S SG  I+HV +F+D E S DD +  N++  K+K K    KK + KK KKNK+ K+ +        KR
Subjt:  VVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGKR

Query:  PKKKLKL
        P KKLKL
Subjt:  PKKKLKL
AT5G18540.2 unknown protein2.3e-3147.34Show/hide
Query:  EDLSEEERRALRGSKFAPLPSQPTSSRSH-PRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFLL
        E+L+E+E+RALRGSKFAPL S P+SSRS  PRLAHPGGPLKTNKAAALAKFL+RKL QDPNGL++I+P ++ELAV+NAK +V+SS               
Subjt:  EDLSEEERRALRGSKFAPLPSQPTSSRSH-PRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFLL

Query:  VVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGKR
                                        S SG  I+HV +F+D E S DD +  N++  K+K K    KK + KK KKNK+ K  V++      KR
Subjt:  VVARKVAFVEIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGKR

Query:  PKKKLKL
        P KKLKL
Subjt:  PKKKLKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGGATCTTAGCGAGGAAGAAAGACGAGCTTTAAGGGGCAGCAAATTCGCGCCACTCCCATCCCAACCCACTTCCTCCAGATCTCACCCCAGGTTGGCTCATCC
TGGTGGTCCATTGAAGACAAACAAGGCGGCGGCTCTCGCCAAGTTTCTCGACAGGAAACTGCATCAAGATCCTAATGGTTTGTCTAATATCAATCCCCAGATTTTGGAGC
TCGCAGTTCGGAATGCCAAGGCCTCTGTTCTCTCCAGTTCGTATTCCCCACCCCCCCTTTTTCTTGTCTCTGTTTTTCTTCTTGTTGTTGCAAGGAAGGTTGCTTTTGTA
GAGATCATGAAGAACATAGACCATAAATTTACTACTACTACTAATCAACTTTCCTTTTCTTCTCTATATTCAGGTTCTGGCACAAATATTCGCCATGTGGACACTTTCGA
TGACCCTGAGGCCTCTTTTGACGATGGGGAAGCCATGAATTCTGAGCCTAAAAAACAGAAGAACAAGAACAAGAAGAACAAGAAGAACAAGAACAAGAAAACTAAGAAGA
ATAAAAGGCAAAAAAAGATTGTTGAGGATTCCGGGTGTGGCGTTGGGAAAAGACCCAAAAAGAAGTTGAAATTGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGTTGGAAGTTTAACCGAGTAAACTTGTAATTTAATAAAATTTAATTAAAAAAAATGTTCGACACGTCGTTCAGCCTACCGTCCAGTGAGACGACAAAATGGAGT
TTTCCCGGTCATCCCCAATAGAGAAGAGGAAGGAGGGAAGAGGGCGATGTGGTAAAAGGCGCAGAAAGAAAGCATCCGTCTGCAGATTTGAGAGAAAATCCATAAAGTAA
TAATAGGAGGATGATGGAGGATCTTAGCGAGGAAGAAAGACGAGCTTTAAGGGGCAGCAAATTCGCGCCACTCCCATCCCAACCCACTTCCTCCAGATCTCACCCCAGGT
TGGCTCATCCTGGTGGTCCATTGAAGACAAACAAGGCGGCGGCTCTCGCCAAGTTTCTCGACAGGAAACTGCATCAAGATCCTAATGGTTTGTCTAATATCAATCCCCAG
ATTTTGGAGCTCGCAGTTCGGAATGCCAAGGCCTCTGTTCTCTCCAGTTCGTATTCCCCACCCCCCCTTTTTCTTGTCTCTGTTTTTCTTCTTGTTGTTGCAAGGAAGGT
TGCTTTTGTAGAGATCATGAAGAACATAGACCATAAATTTACTACTACTACTAATCAACTTTCCTTTTCTTCTCTATATTCAGGTTCTGGCACAAATATTCGCCATGTGG
ACACTTTCGATGACCCTGAGGCCTCTTTTGACGATGGGGAAGCCATGAATTCTGAGCCTAAAAAACAGAAGAACAAGAACAAGAAGAACAAGAAGAACAAGAACAAGAAA
ACTAAGAAGAATAAAAGGCAAAAAAAGATTGTTGAGGATTCCGGGTGTGGCGTTGGGAAAAGACCCAAAAAGAAGTTGAAATTGTGAGCAGAAACACAACTAACACAACT
GGAGATGTTCGGTTTTCAAAAGGTTGGATTGGGGAATAACTTGAAAGGAGTTAAAATGCTGTGTTTTGAAGCAAGAAGCTATTGAGCCCTACAGGGTTGCTGTTCCTGAT
ATTTGTTAAGAGGATTATTTGAGTCTCAGATTCACGAACCTTAAACATTTGATTGACTTGATTTCTCTAGCAAAAGAATGCTTTTAGCTTCTACTTTCTTTTAATCCAAT
TGCTTGAATACTTACTATTACCTATTTGATCATTCTAGAATTCCATGCTTAAATGGGTCTTCTTCTACTCCAATGAATTTTCTACTATATTTGATATTCTAGACTTCTAA
TCCAAAGGGTTTATCCCTAAGCATAATCTAATGCCAAAATCAGGAAGCGACAAGTAAATAAGAATGCGACTAATGCAGAAGCAGGTGGAGTGGTGGAGTGAATTCATTCA
ATGAAACTACATTTTGCTCAAACTATAATGATTTATACATAATTCCAGTCTATGGTACAGTGAACAA
Protein sequenceShow/hide protein sequence
MMEDLSEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLDRKLHQDPNGLSNINPQILELAVRNAKASVLSSSYSPPPLFLVSVFLLVVARKVAFV
EIMKNIDHKFTTTTNQLSFSSLYSGSGTNIRHVDTFDDPEASFDDGEAMNSEPKKQKNKNKKNKKNKNKKTKKNKRQKKIVEDSGCGVGKRPKKKLKL