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Carg20128 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20128
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionenolase-phosphatase E1-like isoform X2
Genome locationCarg_Chr14:12221100..12222009
RNA-Seq ExpressionCarg20128
SyntenyCarg20128
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018632.1 hypothetical protein SDJN02_20502, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-18100Show/hide
Query:  EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
        EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
Subjt:  EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
XP_022955420.1 DNA ligase 1-like [Cucurbita moschata]3.9e-0768.33Show/hide
Query:  EAVKLKEETQAKKE--EPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
        E  +L EE++ +K+  E     E+TQAKKEEPAPKVEQTQISATPD+KGNAGELA KDSK
Subjt:  EAVKLKEETQAKKE--EPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
XP_022979881.1 enolase-phosphatase E1-like isoform X2 [Cucurbita maxima]5.1e-0770Show/hide
Query:  EAVKLKEETQAKKE--EPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
        E  +L EE + +K+  E     E+TQAKKEEPAPKVEQTQISATPDAKGNA ELAVKDSK
Subjt:  EAVKLKEETQAKKE--EPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
XP_023526278.1 uncharacterized protein LOC111789811 isoform X1 [Cucurbita pepo subsp. pepo]3.5e-1696.61Show/hide
Query:  EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGN-AGELAVKDSK
        EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQIS TPDAKGN AGELAVKDSK
Subjt:  EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGN-AGELAVKDSK
XP_023526279.1 uncharacterized protein LOC111789811 isoform X2 [Cucurbita pepo subsp. pepo]3.5e-1696.61Show/hide
Query:  EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGN-AGELAVKDSK
        EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQIS TPDAKGN AGELAVKDSK
Subjt:  EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGN-AGELAVKDSK
TrEMBL top hitse value%identityAlignment
A0A6J1GV33 DNA ligase 1-like1.9e-0768.33Show/hide
Query:  EAVKLKEETQAKKE--EPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
        E  +L EE++ +K+  E     E+TQAKKEEPAPKVEQTQISATPD+KGNAGELA KDSK
Subjt:  EAVKLKEETQAKKE--EPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
A0A6J1IS09 enolase-phosphatase E1-like isoform X22.5e-0770Show/hide
Query:  EAVKLKEETQAKKE--EPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
        E  +L EE + +K+  E     E+TQAKKEEPAPKVEQTQISATPDAKGNA ELAVKDSK
Subjt:  EAVKLKEETQAKKE--EPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGCAGTGAAATTGAAAGAAGAAACCCAAGCTAAGAAGGAAGAACCAGCTCCAAAAGTTGAACAAACCCAAGCTAAGAAGGAAGAACCAGCTCCAAAAGTTGAACAAAC
CCAAATCTCAGCCACTCCAGATGCCAAGGGAAATGCAGGTGAATTGGCAGTGAAGGACTCGAAATAG
mRNA sequenceShow/hide mRNA sequence
GAGGCAGTGAAATTGAAAGAAGAAACCCAAGCTAAGAAGGAAGAACCAGCTCCAAAAGTTGAACAAACCCAAGCTAAGAAGGAAGAACCAGCTCCAAAAGTTGAACAAAC
CCAAATCTCAGCCACTCCAGATGCCAAGGGAAATGCAGGTGAATTGGCAGTGAAGGACTCGAAATAGCACAAAAAAGTGCATTAGAAGGGGCATATGATGGCAGCTACTG
GTAAATGATTTTGAGGCCAAATTGAAAGATGATTGGAGAAATAGTTATATATCTTTACACAGAAACACACACATATATATAAACCAATTTTTAACGATGTTGTAAAGATT
ATAGAATGTTTGATGATGACTTTAATTGTCTAAATAAGAACTCCGGTGGTTCATGATAACTTAAACTAAGACTTTTTATTACATGTAACTGTTCTGTTCGAATTTAAACC
TTGATAAAGCACTAACTATTTTTTAAAATATATATTGGGCTAAATCAAATAAATATCAGAGTATTAGGAATTAAAATATATATTGGGCTGAATCAAAT
Protein sequenceShow/hide protein sequence
EAVKLKEETQAKKEEPAPKVEQTQAKKEEPAPKVEQTQISATPDAKGNAGELAVKDSK