CuGenDBv2

Gene ID	Carg20133
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	BHLH domain-containing protein
Genome location	Carg_Chr14:12240254..12241171
RNA-Seq Expression	Carg20133
Synteny	Carg20133
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain IPR036638 - Helix-loop-helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6582238.1 Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-97

100

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Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK
        KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK
Subjt:  KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK

XP_022955986.1 uncharacterized protein LOC111457820 [Cucurbita moschata]

1.4e-96

99.49

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Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEACTDSVV+LLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK
        KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK
Subjt:  KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK

XP_022979931.1 uncharacterized protein LOC111479473 [Cucurbita maxima]

1.2e-92

95.57

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Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEACTDSVV+LLPHILPVHQSEAAENKASTSRKR RALEANGG QRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPG-----GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILS
        KPLESVTMLPSTNSDSPG     GGVIVSVSSNIVLFGIIFASVRRGMVT+ILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILS
Subjt:  KPLESVTMLPSTNSDSPG-----GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILS

Query:  LKK
        LKK
Subjt:  LKK

XP_023528352.1 uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo]

3.8e-94

97.01

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Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEACTDSVV+LLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQL RLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPG---GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLK
        KPLESVTMLPSTNSDSPG   GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS+HGYVENTIEQIRNDILSLK
Subjt:  KPLESVTMLPSTNSDSPG---GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLK

Query:  K
        K
Subjt:  K

XP_038885840.1 transcription factor bHLH95-like [Benincasa hispida]

3.3e-82

89.05

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Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEACTDSVV L P ILPVHQSEA E KAS SRKR RALEANGGVQ+K REKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIE LQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSP---GGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLK
        K  ESVTMLPSTNSDS    GGGVIVSVS NIVLFGII ASV+RGMVTQILM FERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIE I+NDILSLK
Subjt:  KPLESVTMLPSTNSDSP---GGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLK

Query:  K
        K
Subjt:  K

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5R7 BHLH domain-containing protein

2.5e-75

80.2

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Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPGG----GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSL
        K  ESV +LP+TNSDS GG    GVIVS+S NIVLFG+I ASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTASVHGYVENTIEQIRNDIL L
Subjt:  KPLESVTMLPSTNSDSPGG----GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

A0A1S4DSM0 transcription factor bHLH95-like

5.0e-76

81.09

Show/hide

Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEAC+DSVV L P ILP+H  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPGG---GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLK
        K  ESVT+LP++NSDS GG   GVIVS+S NIVLFG+I ASV+RGMVTQIL+ FERH+ EVLAANV VSHGNLTLTVTASVHGYVENTIEQIRNDILSLK
Subjt:  KPLESVTMLPSTNSDSPGG---GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLK

Query:  K
        K
Subjt:  K

A0A5A7U767 Transcription factor bHLH95-like

5.0e-76

81.09

Show/hide

Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEAC+DSVV L P ILP+H  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFDVL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPGG---GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLK
        K  ESVT+LP++NSDS GG   GVIVS+S NIVLFG+I ASV+RGMVTQIL+ FERH+ EVLAANV VSHGNLTLTVTASVHGYVENTIEQIRNDILSLK
Subjt:  KPLESVTMLPSTNSDSPGG---GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLK

Query:  K
        K
Subjt:  K

A0A6J1GWN9 uncharacterized protein LOC111457820

6.8e-97

99.49

Show/hide

Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEACTDSVV+LLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK
        KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK
Subjt:  KPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK

A0A6J1IS55 uncharacterized protein LOC111479473

5.9e-93

95.57

Show/hide

Query:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
        MEACTDSVV+LLPHILPVHQSEAAENKASTSRKR RALEANGG QRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK
Subjt:  MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEK

Query:  KPLESVTMLPSTNSDSPG-----GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILS
        KPLESVTMLPSTNSDSPG     GGVIVSVSSNIVLFGIIFASVRRGMVT+ILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILS
Subjt:  KPLESVTMLPSTNSDSPG-----GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILS

Query:  LKK
        LKK
Subjt:  LKK

SwissProt top hits

e value

%identity

Alignment

Q9FXA3 Transcription factor bHLH95

4.5e-05

39.13

Show/hide

Query:  REKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSP
        RE+RK+M + F  L +L+P L PKA + TIV E +  I+ L++ L +LEM+K  LE +    ++ + +P
Subjt:  REKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSP

Arabidopsis top hits

e value

%identity

Alignment

AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

3.2e-06

39.13

Show/hide

Query:  REKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSP
        RE+RK+M + F  L +L+P L PKA + TIV E +  I+ L++ L +LEM+K  LE +    ++ + +P
Subjt:  REKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCATGCACCGACTCTGTGGTTACACTTTTGCCTCACATATTGCCGGTGCATCAGTCTGAAGCTGCGGAAAACAAGGCTTCGACCTCAAGAAAGCGTCGGAGAGC
TCTGGAAGCCAACGGCGGTGTACAGAGGAAGGGGAGAGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCAATCTCTCGTCCCGAATCTCTCTCCTAAGGCTA
CGAGGGAGACTATTGTTTCCGAGACGATCCAGTTCATCGAGGATCTACAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAACCATTGGAATCGGTGACGATGCTTCCT
AGTACGAACTCGGATTCACCAGGGGGCGGCGTCATCGTCTCGGTCTCCAGCAACATCGTGTTGTTTGGGATTATTTTTGCTTCTGTTCGACGAGGTATGGTGACACAGAT
TTTAATGGCGTTTGAAAGACACCAGGCTGAAGTTCTAGCAGCGAATGTTGCAGTCAGCCATGGCAATTTAACTTTAACTGTCACAGCTTCTGTACATGGTTACGTAGAGA
ACACCATAGAGCAGATTAGAAACGATATCCTAAGCTTAAAGAAGTAA

mRNA sequence

Show/hide mRNA sequence

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACGCACATCCTGCAACCCTTTTCATTGCTGCATAAAAGCCCTCATCAATGGCAGAATAGAGGGAGAACGAACAAGAAG
ACGGCGGGAAGAAGATTGGCAACCTTCGATTTGTAGTAATGGAGGCATGCACCGACTCTGTGGTTACACTTTTGCCTCACATATTGCCGGTGCATCAGTCTGAAGCTGCG
GAAAACAAGGCTTCGACCTCAAGAAAGCGTCGGAGAGCTCTGGAAGCCAACGGCGGTGTACAGAGGAAGGGGAGAGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGT
TCTTCAATCTCTCGTCCCGAATCTCTCTCCTAAGGCTACGAGGGAGACTATTGTTTCCGAGACGATCCAGTTCATCGAGGATCTACAGAAGCAGTTGATGAGGCTGGAAA
TGGAGAAGAAACCATTGGAATCGGTGACGATGCTTCCTAGTACGAACTCGGATTCACCAGGGGGCGGCGTCATCGTCTCGGTCTCCAGCAACATCGTGTTGTTTGGGATT
ATTTTTGCTTCTGTTCGACGAGGTATGGTGACACAGATTTTAATGGCGTTTGAAAGACACCAGGCTGAAGTTCTAGCAGCGAATGTTGCAGTCAGCCATGGCAATTTAAC
TTTAACTGTCACAGCTTCTGTACATGGTTACGTAGAGAACACCATAGAGCAGATTAGAAACGATATCCTAAGCTTAAAGAAGTAATAAACCTCCATTGTTCACGAGATTC
TTGCCTTCTTATTTACTACGAGAGGGATGTTTAATGCTTCTACAGAACTAGAATTTGAAAGAAT

Protein sequence

Show/hide protein sequence

MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLP
STNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK

Carg20133 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome