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Carg20141 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20141
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:12270339..12270560
RNA-Seq ExpressionCarg20141
SyntenyCarg20141
Gene Ontology termsGO:0000124 - SAGA complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018645.1 hypothetical protein SDJN02_20515, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-31100Show/hide
Query:  MIRMTDVKQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        MIRMTDVKQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
Subjt:  MIRMTDVKQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

XP_022955384.1 uncharacterized protein LOC111457430 isoform X1 [Cucurbita moschata]6.4e-2389.39Show/hide
Query:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        + S  +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
Subjt:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

XP_022955385.1 uncharacterized protein LOC111457430 isoform X2 [Cucurbita moschata]6.4e-2389.39Show/hide
Query:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        + S  +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
Subjt:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

XP_023528789.1 uncharacterized protein LOC111791619 isoform X3 [Cucurbita pepo subsp. pepo]3.2e-2287.88Show/hide
Query:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        + S  +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAW QIAPVELTQKKLST
Subjt:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

XP_023528790.1 uncharacterized protein LOC111791619 isoform X4 [Cucurbita pepo subsp. pepo]3.2e-2287.88Show/hide
Query:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        + S  +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAW QIAPVELTQKKLST
Subjt:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

TrEMBL top hitse value%identityAlignment
A0A6J1GV02 uncharacterized protein LOC111457430 isoform X23.1e-2389.39Show/hide
Query:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        + S  +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
Subjt:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

A0A6J1GW46 uncharacterized protein LOC111457430 isoform X13.1e-2389.39Show/hide
Query:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        + S  +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
Subjt:  KQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

A0A6J1IRX4 uncharacterized protein LOC111479416 isoform X32.0e-2293.44Show/hide
Query:  LGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAW QIAPVELTQKKLST
Subjt:  LGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

A0A6J1IXG1 uncharacterized protein LOC111479416 isoform X12.0e-2293.44Show/hide
Query:  LGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAW QIAPVELTQKKLST
Subjt:  LGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

A0A6J1IXQ1 uncharacterized protein LOC111479416 isoform X22.0e-2293.44Show/hide
Query:  LGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST
        +GK+MDS SLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAW QIAPVELTQKKLST
Subjt:  LGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGGATGACTGATGTAAAACAATCGCTCTTCCTTGGAAAACAGATGGATAGTGATTCCTTAACATCTGCATGGAAATCTGACCGTAATCTGGCCATATTCTCATC
TGGGAAATGTCTCCCTGCTGGTGGTGCCTCAACTAAGTTTGTTACTGGCAGCAGTGTTGCATGGCAACAAATTGCTCCAGTTGAATTGACACAAAAGAAACTATCTACCT
AG
mRNA sequenceShow/hide mRNA sequence
ATGATCAGGATGACTGATGTAAAACAATCGCTCTTCCTTGGAAAACAGATGGATAGTGATTCCTTAACATCTGCATGGAAATCTGACCGTAATCTGGCCATATTCTCATC
TGGGAAATGTCTCCCTGCTGGTGGTGCCTCAACTAAGTTTGTTACTGGCAGCAGTGTTGCATGGCAACAAATTGCTCCAGTTGAATTGACACAAAAGAAACTATCTACCT
AG
Protein sequenceShow/hide protein sequence
MIRMTDVKQSLFLGKQMDSDSLTSAWKSDRNLAIFSSGKCLPAGGASTKFVTGSSVAWQQIAPVELTQKKLST