CuGenDBv2

Gene ID	Carg20143
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Genome location	Carg_Chr14:12274154..12276762
RNA-Seq Expression	Carg20143
Synteny	Carg20143
Gene Ontology terms	GO:0000124 - SAGA complex (cellular component)
InterPro domains	IPR037804 - SAGA-associated factor 73

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582244.1 hypothetical protein SDJN03_22246, partial [Cucurbita argyrosperma subsp. sororia]

4.5e-71

99.28

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Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI
        CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADA+I
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI

KAG7018647.1 hypothetical protein SDJN02_20517 [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-79

100

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Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASILPYHIDFLILIGR
        CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASILPYHIDFLILIGR
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASILPYHIDFLILIGR

XP_022955384.1 uncharacterized protein LOC111457430 isoform X1 [Cucurbita moschata]

4.5e-71

99.28

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Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI
        CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADA+I
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI

XP_022955387.1 uncharacterized protein LOC111457430 isoform X3 [Cucurbita moschata]

4.5e-71

99.28

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Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI
        CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADA+I
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI

XP_022955388.1 uncharacterized protein LOC111457430 isoform X4 [Cucurbita moschata]

4.5e-71

99.28

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Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI
        CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADA+I
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GTH0 uncharacterized protein LOC111457430 isoform X3

2.2e-71

99.28

Show/hide

Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI
        CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADA+I
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI

A0A6J1GTT5 uncharacterized protein LOC111457430 isoform X4

2.2e-71

99.28

Show/hide

Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI
        CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADA+I
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI

A0A6J1GW46 uncharacterized protein LOC111457430 isoform X1

2.2e-71

99.28

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Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI
        CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADA+I
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI

A0A6J1IXG1 uncharacterized protein LOC111479416 isoform X1

2.4e-70

98.54

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Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADAS
        CRSLGSGQG IMDLDSGMGHRKHSRKEKKKLLPADA+
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADAS

A0A6J1IXQ1 uncharacterized protein LOC111479416 isoform X2

1.1e-70

97.83

Show/hide

Query:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
        MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL
Subjt:  MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSEL

Query:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI
        CRSLGSGQG IMDLDSGMGHRKHSRKEKKKLLPADA++
Subjt:  CRSLGSGQGIIMDLDSGMGHRKHSRKEKKKLLPADASI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGGTCTGGATGATTGGAGGAGCTCTCGTGCAGTTGGAAATGGGAGAATGGCAGTGATGACAAGGCTTCTGGCTGCAGGGAGTTTCTCCCGAACTATTGCTGAGGAAGT
TGGTCATCAGAAATTAGCTTCTGAATTTATCTGCAGAGAACTTCGTGATGCAGATGAAGCAAATTTAATTGATGAAGAAGATATGCACGTCTTTGGTTTGAAGCCTATGG
TTGATCCTCTGAACTTGGTTTCCTGCAATATTTGTAAGAAGCCAGTAAAGGCCAGTCAATATATCATTCATTCAGAACTATGCAGGTCACTAGGTTCCGGACAAGGGATT
ATTATGGACCTTGATAGTGGGATGGGCCATAGGAAACACTCAAGGAAGGAGAAGAAAAAGTTGCTACCTGCTGATGCTAGTATCCTTCCATATCACATTGATTTTCTGAT
TCTAATTGGAAGATGA

mRNA sequence

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GTTCAAATATTTCAGATAAGAAAACCAAAGACATTGTGAAGGAGAGAGAGACTGAGAGAAAAATTCCCGCTCTCTCTCTCTCTCTCTCTCTATATTGCTTCCTCCATAGG
GTTTCCTCTTTCCGCTTCCACTGTTTTTTCTTCTCTTCTTCATGTCATTCGGCCCTCACTTCCGCAGCATTTCTCTCAAATTTCTCTAAATTCGTTTCGGCAATTGATCC
GAGTTTTCCTGCTTTCTCGCCGGTTCCATGGGTCTGGATGATTGGAGGAGCTCTCGTGCAGTTGGAAATGGGAGAATGGCAGTGATGACAAGGCTTCTGGCTGCAGGGAG
TTTCTCCCGAACTATTGCTGAGGAAGTTGGTCATCAGAAATTAGCTTCTGAATTTATCTGCAGAGAACTTCGTGATGCAGATGAAGCAAATTTAATTGATGAAGAAGATA
TGCACGTCTTTGGTTTGAAGCCTATGGTTGATCCTCTGAACTTGGTTTCCTGCAATATTTGTAAGAAGCCAGTAAAGGCCAGTCAATATATCATTCATTCAGAACTATGC
AGGTCACTAGGTTCCGGACAAGGGATTATTATGGACCTTGATAGTGGGATGGGCCATAGGAAACACTCAAGGAAGGAGAAGAAAAAGTTGCTACCTGCTGATGCTAGTAT
CCTTCCATATCACATTGATTTTCTGATTCTAATTGGAAGATGA

Protein sequence

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MGLDDWRSSRAVGNGRMAVMTRLLAAGSFSRTIAEEVGHQKLASEFICRELRDADEANLIDEEDMHVFGLKPMVDPLNLVSCNICKKPVKASQYIIHSELCRSLGSGQGI
IMDLDSGMGHRKHSRKEKKKLLPADASILPYHIDFLILIGR

Carg20143 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome