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Carg20166 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20166
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome b6-f complex subunit 7
Genome locationCarg_Chr11:8316460..8316843
RNA-Seq ExpressionCarg20166
SyntenyCarg20166
Gene Ontology termsGO:0009512 - cytochrome b6f complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012595 - PetM of cytochrome b6/f complex subunit 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588635.1 Cytochrome b6-f complex subunit 7, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5899.21Show/hide
Query:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
        MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCAD+SFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
Subjt:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRVEAFVEESE
        IINGLVLVGVAVGFVLLRVEAFVEESE
Subjt:  IINGLVLVGVAVGFVLLRVEAFVEESE

XP_022931584.1 uncharacterized protein LOC111437757 [Cucurbita moschata]5.7e-59100Show/hide
Query:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
        MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
Subjt:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRVEAFVEESE
        IINGLVLVGVAVGFVLLRVEAFVEESE
Subjt:  IINGLVLVGVAVGFVLLRVEAFVEESE

XP_022972366.1 uncharacterized protein LOC111470941 [Cucurbita maxima]5.0e-4785.71Show/hide
Query:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAAI
        ATASATLSPA+STAAP+ A SRRQR+T VHYI+GLNSFGGLKAHNNIFSLG+PVCADQSFANIV SLK P KGKGK  +GGGAL STCNAAGEIFRIAAI
Subjt:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAAI

Query:  INGLVLVGVAVGFVLLRVEAFVEESE
        INGLVLVGVAVGFVLLR+EA VEE+E
Subjt:  INGLVLVGVAVGFVLLRVEAFVEESE

XP_022988969.1 uncharacterized protein LOC111486171 [Cucurbita maxima]1.5e-5696.85Show/hide
Query:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
        MATASATL PAMSTAAPLGAPSRRQR+TTVHYISGLNSFGGLKAHN IFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGAL STCNAAGEIFRIAA
Subjt:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRVEAFVEESE
        IINGLVLVGVAVGFVLLRVEAFVEESE
Subjt:  IINGLVLVGVAVGFVLLRVEAFVEESE

XP_023530143.1 uncharacterized protein LOC111792789 [Cucurbita pepo subsp. pepo]6.3e-5898.43Show/hide
Query:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
        MATASATLSPAMSTAAPLGAPSRR R+TTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
Subjt:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRVEAFVEESE
        IINGLVLVGVAVGFVLLRVEAFVEESE
Subjt:  IINGLVLVGVAVGFVLLRVEAFVEESE

TrEMBL top hitse value%identityAlignment
A0A1S3C0U4 uncharacterized protein LOC1034952011.3e-4582.68Show/hide
Query:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
        MATASATLS AMSTAAP+ A SRRQR T VHYI+GLNSFGGLKAHNN+ SLG+PVCADQSFA IV SLK P KGKGK  +GGGAL STCNAAGEIFRIAA
Subjt:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRVEAFVEESE
        IINGLVL+GVAVGFVLLR+EA VEE+E
Subjt:  IINGLVLVGVAVGFVLLRVEAFVEESE

A0A6J1C3G5 uncharacterized protein LOC1110080071.9e-4480.47Show/hide
Query:  MATASATLSPAMSTAAPLGAPSRR-QRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIA
        MATASATLSPAMSTAAP+ A SRR QR   VHYI+GLNSFGGLKAHNN+ SLG+P+C D SFA IV SLK P KGKGK   GGGAL STCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPLGAPSRR-QRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRVEAFVEESE
        AIINGLVLVGVAVGFVLLR+EA+VEE+E
Subjt:  AIINGLVLVGVAVGFVLLRVEAFVEESE

A0A6J1EUM6 uncharacterized protein LOC1114377572.8e-59100Show/hide
Query:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
        MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
Subjt:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRVEAFVEESE
        IINGLVLVGVAVGFVLLRVEAFVEESE
Subjt:  IINGLVLVGVAVGFVLLRVEAFVEESE

A0A6J1I5T0 uncharacterized protein LOC1114709412.4e-4785.71Show/hide
Query:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAAI
        ATASATLSPA+STAAP+ A SRRQR+T VHYI+GLNSFGGLKAHNNIFSLG+PVCADQSFANIV SLK P KGKGK  +GGGAL STCNAAGEIFRIAAI
Subjt:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAAI

Query:  INGLVLVGVAVGFVLLRVEAFVEESE
        INGLVLVGVAVGFVLLR+EA VEE+E
Subjt:  INGLVLVGVAVGFVLLRVEAFVEESE

A0A6J1JN25 uncharacterized protein LOC1114861717.5e-5796.85Show/hide
Query:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
        MATASATL PAMSTAAPLGAPSRRQR+TTVHYISGLNSFGGLKAHN IFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGAL STCNAAGEIFRIAA
Subjt:  MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRVEAFVEESE
        IINGLVLVGVAVGFVLLRVEAFVEESE
Subjt:  IINGLVLVGVAVGFVLLRVEAFVEESE

SwissProt top hitse value%identityAlignment
P80883 Cytochrome b6-f complex subunit 7 (Fragment)2.4e-0780.56Show/hide
Query:  NAAGEIFRIAAIINGLVLVGVAVGFVLLRVEAFVEE
        NAA EIFRIAA++NGL LVGVA+GFVLLR+EA VEE
Subjt:  NAAGEIFRIAAIINGLVLVGVAVGFVLLRVEAFVEE

Arabidopsis top hitse value%identityAlignment
AT2G26500.1 cytochrome b6f complex subunit (petM), putative4.4e-2553.91Show/hide
Query:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNN-IFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSG-GGALGSTCNAAGEIFRIA
        A A A +S   S        ++++    V YI+GLNS+GGLKA NN + S+G P+C +Q FAN+V SL        KGR G GGAL +TCNA GEIF+IA
Subjt:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNN-IFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSG-GGALGSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRVEAFVEESE
        AI+N L LVGVAVGFVLLR+E  VEE+E
Subjt:  AIINGLVLVGVAVGFVLLRVEAFVEESE

AT2G26500.2 cytochrome b6f complex subunit (petM), putative4.4e-2553.91Show/hide
Query:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNN-IFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSG-GGALGSTCNAAGEIFRIA
        A A A +S   S        ++++    V YI+GLNS+GGLKA NN + S+G P+C +Q FAN+V SL        KGR G GGAL +TCNA GEIF+IA
Subjt:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNN-IFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSG-GGALGSTCNAAGEIFRIA

Query:  AIINGLVLVGVAVGFVLLRVEAFVEESE
        AI+N L LVGVAVGFVLLR+E  VEE+E
Subjt:  AIINGLVLVGVAVGFVLLRVEAFVEESE

AT2G26500.3 cytochrome b6f complex subunit (petM), putative5.7e-0934.65Show/hide
Query:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNN-IFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA
        A A A +S   S        ++++    V YI+GLNS+GGLKA NN + S+G P+C +Q FAN+V SLK                               
Subjt:  ATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNN-IFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAA

Query:  IINGLVLVGVAVGFVLLRVEAFVEESE
                G  VGFVLLR+E  VEE+E
Subjt:  IINGLVLVGVAVGFVLLRVEAFVEESE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCATCCGCTACCCTCTCCCCTGCCATGTCCACCGCCGCCCCGCTCGGCGCCCCCTCGAGGCGGCAGAGGAGCACCACTGTCCATTACATTTCTGGTCTCAA
CTCCTTTGGTGGGTTGAAAGCTCACAACAACATCTTCTCGTTGGGCGTTCCCGTTTGTGCTGATCAGTCATTTGCAAACATTGTGGGATCCCTGAAACGCCCATTGAAGG
GAAAGGGAAAGGGCAGAAGCGGCGGTGGGGCTCTGGGTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCCGCCATCATCAATGGGCTTGTTCTTGTTGGAGTG
GCTGTGGGGTTTGTTCTTCTCCGGGTTGAGGCTTTCGTGGAGGAGTCTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGCATCCGCTACCCTCTCCCCTGCCATGTCCACCGCCGCCCCGCTCGGCGCCCCCTCGAGGCGGCAGAGGAGCACCACTGTCCATTACATTTCTGGTCTCAA
CTCCTTTGGTGGGTTGAAAGCTCACAACAACATCTTCTCGTTGGGCGTTCCCGTTTGTGCTGATCAGTCATTTGCAAACATTGTGGGATCCCTGAAACGCCCATTGAAGG
GAAAGGGAAAGGGCAGAAGCGGCGGTGGGGCTCTGGGTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCCGCCATCATCAATGGGCTTGTTCTTGTTGGAGTG
GCTGTGGGGTTTGTTCTTCTCCGGGTTGAGGCTTTCGTGGAGGAGTCTGAGTGA
Protein sequenceShow/hide protein sequence
MATASATLSPAMSTAAPLGAPSRRQRSTTVHYISGLNSFGGLKAHNNIFSLGVPVCADQSFANIVGSLKRPLKGKGKGRSGGGALGSTCNAAGEIFRIAAIINGLVLVGV
AVGFVLLRVEAFVEESE