; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20175 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20175
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEF hand calcium-binding family protein
Genome locationCarg_Chr11:190940..191365
RNA-Seq ExpressionCarg20175
SyntenyCarg20175
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587417.1 putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. sororia]3.2e-7197.87Show/hide
Query:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
        MEITSA HYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLP EAE AVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
Subjt:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL

Query:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
Subjt:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

KAG7021401.1 putative calcium-binding protein CML31, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-73100Show/hide
Query:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
        MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
Subjt:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL

Query:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
Subjt:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

XP_022925940.1 putative calcium-binding protein CML19 [Cucurbita moschata]8.5e-7298.58Show/hide
Query:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
        MEITSA HYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAE AVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
Subjt:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL

Query:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
Subjt:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

XP_022966390.1 probable calcium-binding protein CML31 [Cucurbita maxima]1.9e-7197.87Show/hide
Query:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
        MEITSA HYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAE AVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
Subjt:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL

Query:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        KRMLKKLGETKSTAECKVMIRRFDLNGDGLISF+EFQIMMA
Subjt:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

XP_023529455.1 probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo]3.2e-7197.87Show/hide
Query:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
        MEITSA HYD VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAE AVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
Subjt:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL

Query:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
Subjt:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

TrEMBL top hitse value%identityAlignment
A0A1S3CN12 putative calcium-binding protein CML193.9e-6286.62Show/hide
Query:  MEIT-SARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKS
        MEI  S   YDRVL YFDEDGDGKISPSELRNRLGLIGGELL AEAE AVESLDSDGDGLLC GDIERLL+VGEEEKLKDL+EAF LYD+EGCGFITPK+
Subjt:  MEIT-SARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKS

Query:  LKRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        LK+ML+KLGE KST ECK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  LKRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

A0A5A7URJ2 Putative calcium-binding protein CML193.9e-6286.62Show/hide
Query:  MEIT-SARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKS
        MEI  S   YDRVL YFDEDGDGKISPSELRNRLGLIGGELL AEAE AVESLDSDGDGLLC GDIERLL+VGEEEKLKDL+EAF LYD+EGCGFITPK+
Subjt:  MEIT-SARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKS

Query:  LKRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        LK+ML+KLGE KST ECK+MIRRFDLNGDGLISFEEFQIMMA
Subjt:  LKRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

A0A6J1E2E7 putative calcium-binding protein CML195.0e-6285.11Show/hide
Query:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
        MEI ++  Y RVL YFDEDGDGKISPSELRNR+GL+GGELL  EAE+AVESLDSDGDGLLC GD ERLLDVGEEEKLKDL+EAFGLYD EGCGFITPKSL
Subjt:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL

Query:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        KRML+KLGE+KSTAECK+MI +FDLNGDGLISFEEFQIMMA
Subjt:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

A0A6J1EJM6 putative calcium-binding protein CML194.1e-7298.58Show/hide
Query:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
        MEITSA HYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAE AVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
Subjt:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL

Query:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
Subjt:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

A0A6J1HRH8 probable calcium-binding protein CML319.2e-7297.87Show/hide
Query:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
        MEITSA HYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAE AVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL
Subjt:  MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSL

Query:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA
        KRMLKKLGETKSTAECKVMIRRFDLNGDGLISF+EFQIMMA
Subjt:  KRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMMA

SwissProt top hitse value%identityAlignment
Q8RYJ8 Putative calcium-binding protein CML193.5e-2849.65Show/hide
Query:  ITSARHYDRVLRYFDEDGDGKISPSELRNRL-GLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERL---LDVG-EEEKLKDLREAFGLYDAEGCGFITP
        + +   + RV   FD D DGKIS +ELR  +   +G ++   EAE  V S D+D DGLL   +  +L   L++G EEE+ + L EAF +Y+ EG G ITP
Subjt:  ITSARHYDRVLRYFDEDGDGKISPSELRNRL-GLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERL---LDVG-EEEKLKDLREAFGLYDAEGCGFITP

Query:  KSLKRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
         SLKRML KLG  +   EC+ MI RFDL+GDG+ISFEEF+IMM
Subjt:  KSLKRMLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM

Q8RYK0 Probable calcium-binding protein CML312.1e-2851.15Show/hide
Query:  FDEDGDGKISPSELRNRL-GLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKD-----LREAFGLYDAEGCGFITPKSLKRMLKKLGE
        FD DGDG+IS +ELR  +   +G E+   EA   V S+D+DGDGLLC  +  RL+   E E+  +     LREAFG+Y+ EG G ITP SL+RML++LG 
Subjt:  FDEDGDGKISPSELRNRL-GLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKD-----LREAFGLYDAEGCGFITPKSLKRMLKKLGE

Query:  TKSTAECKVMIRRFDLNGDGLISFEEFQIMM
         +   +C+ MI RFDLNGDG++SF+EF+IMM
Subjt:  TKSTAECKVMIRRFDLNGDGLISFEEFQIMM

Q9FIH9 Calcium-binding protein CML371.2e-2546.97Show/hide
Query:  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLL---DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLG
        V  Y D + DGKIS  EL++ + L+GG L   E E  V++ D DGDG +   +  +L+   D  +EE+ K+L+EAFG+Y  EG  FIT  SL+R L +LG
Subjt:  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLL---DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLG

Query:  ETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
        E+ +   CKVMIR FD N DG++SF+EF +MM
Subjt:  ETKSTAECKVMIRRFDLNGDGLISFEEFQIMM

Q9SRE6 Calcium-binding protein CML381.2e-2849.63Show/hide
Query:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLK
        R  + V  Y D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   +  +L+ V  EEEK  +L+ AF LY AEG   ITP+SLK MLK
Subjt:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLK

Query:  KLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
        KLGE+++T +C+VMI  FDLN DG++SF+EF +MM
Subjt:  KLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM

Q9SRE7 Calcium-binding protein CML398.6e-2745.65Show/hide
Query:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLL----DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKR
        R  + V  Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L + +   L+    +  EEEK + + EAF +Y A+G   ITP SLK 
Subjt:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLL----DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKR

Query:  MLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
        ML KLGE+++T +CKVMI+ FDLN DG++SF+EF +MM
Subjt:  MLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein6.1e-2845.65Show/hide
Query:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLL----DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKR
        R  + V  Y D + DG+IS  EL+     +G ++   EAE AV+  D DGDG+L + +   L+    +  EEEK + + EAF +Y A+G   ITP SLK 
Subjt:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLL----DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKR

Query:  MLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
        ML KLGE+++T +CKVMI+ FDLN DG++SF+EF +MM
Subjt:  MLKKLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM

AT1G76650.1 calmodulin-like 388.6e-3049.63Show/hide
Query:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLK
        R  + V  Y D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   +  +L+ V  EEEK  +L+ AF LY AEG   ITP+SLK MLK
Subjt:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLK

Query:  KLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
        KLGE+++T +C+VMI  FDLN DG++SF+EF +MM
Subjt:  KLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM

AT1G76650.2 calmodulin-like 388.9e-2747.41Show/hide
Query:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLK
        R  + V  Y D + DG+ISP EL+     +G +LL           D+DGDG+L   +  +L+ V  EEEK  +L+ AF LY AEG   ITP+SLK MLK
Subjt:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLK

Query:  KLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
        KLGE+++T +C+VMI  FDLN DG++SF+EF +MM
Subjt:  KLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM

AT1G76650.3 calmodulin-like 388.6e-3049.63Show/hide
Query:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLK
        R  + V  Y D + DG+ISP EL+     +G +L   EA  AV   D+DGDG+L   +  +L+ V  EEEK  +L+ AF LY AEG   ITP+SLK MLK
Subjt:  RHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDV-GEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLK

Query:  KLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
        KLGE+++T +C+VMI  FDLN DG++SF+EF +MM
Subjt:  KLGETKSTAECKVMIRRFDLNGDGLISFEEFQIMM

AT5G42380.1 calmodulin like 378.9e-2746.97Show/hide
Query:  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLL---DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLG
        V  Y D + DGKIS  EL++ + L+GG L   E E  V++ D DGDG +   +  +L+   D  +EE+ K+L+EAFG+Y  EG  FIT  SL+R L +LG
Subjt:  VLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLL---DVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLG

Query:  ETKSTAECKVMIRRFDLNGDGLISFEEFQIMM
        E+ +   CKVMIR FD N DG++SF+EF +MM
Subjt:  ETKSTAECKVMIRRFDLNGDGLISFEEFQIMM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCACCAGTGCGCGGCACTACGACCGCGTCTTGCGTTACTTCGATGAAGATGGCGACGGCAAAATCTCGCCGTCGGAGCTGAGGAATCGTCTCGGATTGATCGG
CGGAGAGCTGCTGCCGGCGGAGGCAGAGGTGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGTGATATCGAGCGGCTACTGGACGTGGGCGAGG
AAGAGAAATTGAAGGACTTGAGAGAGGCTTTCGGATTGTACGATGCCGAAGGCTGCGGGTTCATTACTCCGAAAAGCTTGAAGAGAATGCTTAAAAAATTGGGGGAAACG
AAATCCACGGCGGAGTGTAAAGTGATGATTCGCCGCTTCGATTTGAACGGTGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCACCAGTGCGCGGCACTACGACCGCGTCTTGCGTTACTTCGATGAAGATGGCGACGGCAAAATCTCGCCGTCGGAGCTGAGGAATCGTCTCGGATTGATCGG
CGGAGAGCTGCTGCCGGCGGAGGCAGAGGTGGCGGTGGAATCGCTCGACTCCGACGGCGACGGACTGCTCTGCGTCGGTGATATCGAGCGGCTACTGGACGTGGGCGAGG
AAGAGAAATTGAAGGACTTGAGAGAGGCTTTCGGATTGTACGATGCCGAAGGCTGCGGGTTCATTACTCCGAAAAGCTTGAAGAGAATGCTTAAAAAATTGGGGGAAACG
AAATCCACGGCGGAGTGTAAAGTGATGATTCGCCGCTTCGATTTGAACGGTGACGGTTTGATTAGCTTTGAGGAGTTTCAGATCATGATGGCCTGA
Protein sequenceShow/hide protein sequence
MEITSARHYDRVLRYFDEDGDGKISPSELRNRLGLIGGELLPAEAEVAVESLDSDGDGLLCVGDIERLLDVGEEEKLKDLREAFGLYDAEGCGFITPKSLKRMLKKLGET
KSTAECKVMIRRFDLNGDGLISFEEFQIMMA