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Carg20179 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20179
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMitochondrial pyruvate carrier
Genome locationCarg_Chr11:219329..220714
RNA-Seq ExpressionCarg20179
SyntenyCarg20179
Gene Ontology termsGO:0006850 - mitochondrial pyruvate transmembrane transport (biological process)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
GO:0050833 - pyruvate transmembrane transporter activity (molecular function)
InterPro domainsIPR005336 - Mitochondrial pyruvate carrier


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587422.1 Mitochondrial pyruvate carrier 1, partial [Cucurbita argyrosperma subsp. sororia]2.7e-54100Show/hide
Query:  MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKS
        MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKS
Subjt:  MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKS

Query:  VNYSNE
        VNYSNE
Subjt:  VNYSNE

XP_008464463.1 PREDICTED: mitochondrial pyruvate carrier 1-like [Cucumis melo]1.3e-4589.11Show/hide
Query:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN
        +FRAFLNSPVGPKTTHFWGP ANFGFV AGLADVKKPAD ISG+MTAVLCVYSL  MRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWAMG+RK+V+YSN
Subjt:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN

Query:  E
        E
Subjt:  E

XP_022933393.1 mitochondrial pyruvate carrier 1-like [Cucurbita moschata]1.3e-5399.06Show/hide
Query:  MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKS
        MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKS
Subjt:  MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKS

Query:  VNYSNE
        VNYSNE
Subjt:  VNYSNE

XP_022973945.1 mitochondrial pyruvate carrier 1-like [Cucurbita maxima]9.0e-5096.04Show/hide
Query:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN
        +FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISG+MTAVLC+YSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKSVNYSN
Subjt:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN

Query:  E
        E
Subjt:  E

XP_023531564.1 mitochondrial pyruvate carrier 1-like [Cucurbita pepo subsp. pepo]6.9e-5097.03Show/hide
Query:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN
        +FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKSVN+SN
Subjt:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A0A0LP00 Mitochondrial pyruvate carrier4.2e-4587.13Show/hide
Query:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN
        +FRAFLNSPVGPKTTHFWGP ANFGFV AGLADVKKPAD ISG+MT VLCVYSL  MRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWA+G+RK+V+YSN
Subjt:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN

Query:  E
        E
Subjt:  E

A0A1S3CLN5 Mitochondrial pyruvate carrier6.5e-4689.11Show/hide
Query:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN
        +FRAFLNSPVGPKTTHFWGP ANFGFV AGLADVKKPAD ISG+MTAVLCVYSL  MRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWAMG+RK+V+YSN
Subjt:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN

Query:  E
        E
Subjt:  E

A0A5A7UW28 Mitochondrial pyruvate carrier6.5e-4689.11Show/hide
Query:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN
        +FRAFLNSPVGPKTTHFWGP ANFGFV AGLADVKKPAD ISG+MTAVLCVYSL  MRFGYMVRPRNYLLMGCHAANE+VQLYLLSRWAMG+RK+V+YSN
Subjt:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN

Query:  E
        E
Subjt:  E

A0A6J1F4M1 Mitochondrial pyruvate carrier6.5e-5499.06Show/hide
Query:  MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKS
        MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKS
Subjt:  MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKS

Query:  VNYSNE
        VNYSNE
Subjt:  VNYSNE

A0A6J1IG44 Mitochondrial pyruvate carrier4.3e-5096.04Show/hide
Query:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN
        +FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISG+MTAVLC+YSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKSVNYSN
Subjt:  AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSN

Query:  E
        E
Subjt:  E

SwissProt top hitse value%identityAlignment
O74847 Probable mitochondrial pyruvate carrier 17.2e-1852.94Show/hide
Query:  RAFRAFLNSPVGPK---TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQ
        R F  +L SP   K   +THFWGP +NFG  +A + D+KK    ISG+MT  L +YS   MR+ +MV PRNYLL+GCHA N TVQ
Subjt:  RAFRAFLNSPVGPK---TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQ

P63030 Mitochondrial pyruvate carrier 11.2e-1750.59Show/hide
Query:  TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLY---LLSRWAMGRRKS
        +THFWGP AN+G  +A + D+KK  + ISG+MT  LC YSL+ MRF Y V+PRN+LL  CH  NE  QL     L  + M +R S
Subjt:  TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLY---LLSRWAMGRRKS

Q3ZCG2 Mitochondrial pyruvate carrier 14.2e-1857.97Show/hide
Query:  TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQL
        +THFWGP AN+G  +A + D+KK  + ISG+MT  LC YSL+ MRF Y V+PRN+LL  CHA NE  QL
Subjt:  TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQL

Q949R9 Mitochondrial pyruvate carrier 12.7e-3370.45Show/hide
Query:  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWA
        F+AFLNSP+GPKTTHFWGP AN+GFV AGL D++KP + ISG M++ +CVYS   MRF +MV+PRNYLL+ CHA+NETVQLY LSRWA
Subjt:  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWA

Q9Y5U8 Mitochondrial pyruvate carrier 14.2e-1857.97Show/hide
Query:  TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQL
        +THFWGP AN+G  +A + D+KK  + ISG+MT  LC YSL+ MRF Y V+PRN+LL  CHA NE  QL
Subjt:  TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQL

Arabidopsis top hitse value%identityAlignment
AT4G05590.1 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336)2.2e-0931.76Show/hide
Query:  RAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSR
        +A  N P GPKT HFW P   +G  +A +AD +KP + +S     V+    L   R+  ++ P+N+ L           +Y L+R
Subjt:  RAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSR

AT4G22310.1 Uncharacterised protein family (UPF0041)5.7e-1031.76Show/hide
Query:  RAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSR
        +A  N P GPKT HFW P   +G  +A +AD  KP +K+S      +    +   R+  ++ P+N+ L   + A     +Y L+R
Subjt:  RAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSR

AT5G20090.1 Uncharacterised protein family (UPF0041)1.9e-3470.45Show/hide
Query:  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWA
        F+AFLNSP+GPKTTHFWGP AN+GFV AGL D++KP + ISG M++ +CVYS   MRF +MV+PRNYLL+ CHA+NETVQLY LSRWA
Subjt:  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWA

AT5G20090.2 Uncharacterised protein family (UPF0041)1.9e-3470.45Show/hide
Query:  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWA
        F+AFLNSP+GPKTTHFWGP AN+GFV AGL D++KP + ISG M++ +CVYS   MRF +MV+PRNYLL+ CHA+NETVQLY LSRWA
Subjt:  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWA

AT5G20090.3 Uncharacterised protein family (UPF0041)1.9e-3470.45Show/hide
Query:  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWA
        F+AFLNSP+GPKTTHFWGP AN+GFV AGL D++KP + ISG M++ +CVYS   MRF +MV+PRNYLL+ CHA+NETVQLY LSRWA
Subjt:  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGTTCCGAGCGTTCCGAGCGTTCCTCAACAGTCCTGTTGGCCCTAAAACAACTCATTTTTGGGGACCTGCTGCAAACTTCGGTTTCGTGGTTGCTGGGCTGGC
AGATGTGAAAAAGCCAGCCGATAAGATATCCGGCAAAATGACGGCAGTTTTGTGCGTCTATTCGCTGTCTGGCATGAGATTTGGATATATGGTTCGGCCTCGGAATTATC
TGCTTATGGGATGCCATGCCGCGAATGAAACTGTTCAGCTCTATCTTCTCTCCCGTTGGGCGATGGGAAGGAGGAAGAGTGTCAATTACAGCAACGAGTAG
mRNA sequenceShow/hide mRNA sequence
GCAAACCCCGCCAAATAGGCTCACAAAAAGCATGCTCCTCCGCACCGCGCTCTCGTTTGCACTACCGCCGCCCAGCCATTCCGACCTTCGTCTTCAAGTTCCTGTTCCTC
GCGATGGTTCCACATTCTCAGGATTAGTGTATTTGCTTCAAGATATTCTTCTCTCTTTTGCTCTGTTCCTCGAGCGGCTCTGGCAATTTGCGGTGGAGATACCTAATCTT
CGATCGATCAATTTCGGTCGCAATCAAGTCCAAATTCACGGATCAAATTTTTTAATCGCGGAATTTTCTATTCGATTACGCATTCACTCGTCAGACCAAAGTTTATCGCG
TAGGGAAAAGTGATAGCGATGCCTCCGTGCGATTGTCATTCGTAGCGGCAGCCAAAGCAATAGTTCGAGGCGGCTTCGATGTCTTCGTTCCGAGCGTTCCGAGCGTTCCT
CAACAGTCCTGTTGGCCCTAAAACAACTCATTTTTGGGGACCTGCTGCAAACTTCGGTTTCGTGGTTGCTGGGCTGGCAGATGTGAAAAAGCCAGCCGATAAGATATCCG
GCAAAATGACGGCAGTTTTGTGCGTCTATTCGCTGTCTGGCATGAGATTTGGATATATGGTTCGGCCTCGGAATTATCTGCTTATGGGATGCCATGCCGCGAATGAAACT
GTTCAGCTCTATCTTCTCTCCCGTTGGGCGATGGGAAGGAGGAAGAGTGTCAATTACAGCAACGAGTAGCTTCCTCTTCGTTTCAATGGCGGTATGAATATGATTACTCC
ATTGTTGCTGTTTCGAATTACTGTTTCTTATGTGTTACCCCAATACCAATCCCCAATAAACAAGTAGCCTTGAAAAACAAAAATGCTCTGCTCATTTTGAATATACTGTT
AGATTCAACGAATTCAATCTATATAGTCAGTGCCTTTTAATTTCATTTACTTGGAACAATATCATTCATAGTTCGTTATTGAATACAATTGTTCAGTTTTTATCTCGACA
GCTTAACTTTGTATCGAATTTATCATAAAGTCAATAAATGCTGTAATCAATGTTTT
Protein sequenceShow/hide protein sequence
MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE