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Carg20199 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20199
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMyelin transcription factor 1-like protein
Genome locationCarg_Chr11:335749..336132
RNA-Seq ExpressionCarg20199
SyntenyCarg20199
Gene Ontology termsGO:0070125 - mitochondrial translational elongation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587442.1 Serine/threonine-protein kinase STY46, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4798.29Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
        MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL

Query:  VAVAFAAVLSFFAVVRS
        VAVAFAAVLSFFAV+ S
Subjt:  VAVAFAAVLSFFAVVRS

KAG7021425.1 hypothetical protein SDJN02_15150, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-53100Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
        MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL

Query:  VAVAFAAVLSFFAVVRSMEIDSLSVSV
        VAVAFAAVLSFFAVVRSMEIDSLSVSV
Subjt:  VAVAFAAVLSFFAVVRSMEIDSLSVSV

XP_022933693.1 uncharacterized protein LOC111441029 [Cucurbita moschata]2.0e-5197.64Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
        MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL

Query:  VAVAFAAVLSFFAVVRSMEIDSLSVSV
        VAV FAAVLS  AVVRSMEIDSLSVSV
Subjt:  VAVAFAAVLSFFAVVRSMEIDSLSVSV

XP_023004957.1 uncharacterized protein LOC111498104 [Cucurbita maxima]2.0e-5197.64Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
        MSTP TEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYL AVLVKERGL
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL

Query:  VAVAFAAVLSFFAVVRSMEIDSLSVSV
        VAVAFAAVLSF AVVRSMEIDSLSVSV
Subjt:  VAVAFAAVLSFFAVVRSMEIDSLSVSV

XP_023530771.1 uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]1.4e-5299.21Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
        MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL

Query:  VAVAFAAVLSFFAVVRSMEIDSLSVSV
        VAVAFAAVLSF AVVRSMEIDSLSVSV
Subjt:  VAVAFAAVLSFFAVVRSMEIDSLSVSV

TrEMBL top hitse value%identityAlignment
A0A0A0LNT4 Uncharacterized protein2.9e-3274.58Show/hide
Query:  AVLLSGIFLLLSGSCIVVLNFD-LMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFA
        A   S IF+LLSG C +V N D LMGRW+PI+GLL VA V ++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERGL+AVAFA
Subjt:  AVLLSGIFLLLSGSCIVVLNFD-LMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFA

Query:  AVLSFFAVVRSMEIDSLS
        A+ SF AV+RS EID LS
Subjt:  AVLSFFAVVRSMEIDSLS

A0A0A0LRZ2 Uncharacterized protein1.7e-3273.6Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFD-LMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERG
        M TP T A   S IF+LLSG C +V N D LMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFD-LMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERG

Query:  LVAVAFAAVLSFFAVVRSMEIDSLS
        L+AVAFAA+ SF AV+RS EI  LS
Subjt:  LVAVAFAAVLSFFAVVRSMEIDSLS

A0A5D3BFC5 Uncharacterized protein4.7e-3576.8Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFD-LMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERG
        M TPVT A   S IF+LLSG C VV N D LMGRW+PI+GLL VAGVA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFD-LMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERG

Query:  LVAVAFAAVLSFFAVVRSMEIDSLS
        L+AVAFAA+ SF AV RS EID LS
Subjt:  LVAVAFAAVLSFFAVVRSMEIDSLS

A0A6J1F5J3 uncharacterized protein LOC1114410299.5e-5297.64Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
        MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL

Query:  VAVAFAAVLSFFAVVRSMEIDSLSVSV
        VAV FAAVLS  AVVRSMEIDSLSVSV
Subjt:  VAVAFAAVLSFFAVVRSMEIDSLSVSV

A0A6J1KRU7 uncharacterized protein LOC1114981049.5e-5297.64Show/hide
Query:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL
        MSTP TEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYL AVLVKERGL
Subjt:  MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGL

Query:  VAVAFAAVLSFFAVVRSMEIDSLSVSV
        VAVAFAAVLSF AVVRSMEIDSLSVSV
Subjt:  VAVAFAAVLSFFAVVRSMEIDSLSVSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein1.4e-0744.83Show/hide
Query:  IVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVRSMEIDSL
        + G + +   A VA  A MV WI+V+VLLAF G  RRVLV + R+IT +V  ++  VL+KE   VA A  AVL +F ++R  + DS+
Subjt:  IVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVRSMEIDSL

AT4G03600.1 unknown protein9.8e-0948.72Show/hide
Query:  GLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVR
        G + +     VA  A MV WI+V+VLLAF G  RRVLV +GR+IT +V  ++  VL+KE G V  AF AVL++F ++R
Subjt:  GLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVR

AT4G28330.1 unknown protein2.3e-0536.05Show/hide
Query:  IVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVRSMEIDS
        + G+L +A    +A  A +V WI+V+V +AFAG  R+ +V +GR++T ++A ++  VL+KE   VA+   A+L++F    S    S
Subjt:  IVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVRSMEIDS

AT4G28340.1 unknown protein2.5e-0435.8Show/hide
Query:  IVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVRS
        + G+L +A    +A  A +V WI+V+V +AF    R+ +V +GR++T ++A Y+  VL+KE   VA+   AV+++F    S
Subjt:  IVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVRS

AT5G50175.1 unknown protein4.7e-1160.94Show/hide
Query:  VGLLVVAGVAVV----AARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKE
        +G  + A +++V    AARATMVAWITVLVLLAF+G RRRVL ++G+ ITADVAM L  VL++E
Subjt:  VGLLVVAGVAVV----AARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACTCCGGTGACGGAGGCCGTTTTGCTGTCGGGGATATTTCTGTTGCTTTCAGGTTCGTGTATTGTCGTTCTTAATTTCGATTTGATGGGGCGATGGGTTCCAAT
TGTGGGGTTGTTAGTGGTTGCCGGAGTGGCGGTGGTGGCCGCGAGAGCCACCATGGTGGCGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCTGGAAACCGACGGCGGG
TTTTGGTGAAACAGGGGAGACAGATCACCGCTGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTGTTGCTGTTGCTTTCGCCGCCGTCCTCAGC
TTCTTCGCCGTGGTTCGGTCGATGGAGATCGATTCACTTTCTGTTTCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACTCCGGTGACGGAGGCCGTTTTGCTGTCGGGGATATTTCTGTTGCTTTCAGGTTCGTGTATTGTCGTTCTTAATTTCGATTTGATGGGGCGATGGGTTCCAAT
TGTGGGGTTGTTAGTGGTTGCCGGAGTGGCGGTGGTGGCCGCGAGAGCCACCATGGTGGCGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCTGGAAACCGACGGCGGG
TTTTGGTGAAACAGGGGAGACAGATCACCGCTGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTGTTGCTGTTGCTTTCGCCGCCGTCCTCAGC
TTCTTCGCCGTGGTTCGGTCGATGGAGATCGATTCACTTTCTGTTTCTGTTTAA
Protein sequenceShow/hide protein sequence
MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLS
FFAVVRSMEIDSLSVSV