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Carg20232 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20232
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:4784065..4785269
RNA-Seq ExpressionCarg20232
SyntenyCarg20232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035320.1 hypothetical protein E6C27_scaffold228G001200 [Cucumis melo var. makuwa]3.3e-0748.19Show/hide
Query:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTK-LTSAAKAA
        M SK+ S GLPLC+S F+LS+  L+T++ DHDRRREAM+ R   S +       RY ++AI +GDL D   +T  +  AAKAA
Subjt:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTK-LTSAAKAA

KAG6605527.1 hypothetical protein SDJN03_02844, partial [Cucurbita argyrosperma subsp. sororia]1.8e-37100Show/hide
Query:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA
        MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA
Subjt:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA

KGN47309.1 hypothetical protein Csa_022984 [Cucumis sativus]1.5e-0745.78Show/hide
Query:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLC-EKTKLTSAAKAA
        M SK+ S GLPLC+S F+LS+  L+T++ DHDRRREAM+ R   S++         +++AI +GDL D   E   +  AAKAA
Subjt:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLC-EKTKLTSAAKAA

RXI04533.1 hypothetical protein DVH24_038807 [Malus domestica]9.8e-0445.45Show/hide
Query:  GLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSA----DTGGIGF----TRYIIQAI--GDGD----LHDLCEKTKLTSAAKAA
        GLPLC+SG S  H   + EM DHDRRREAM+R+RS +         +GF     R   + I   DGD    LHDLC  + L   AKAA
Subjt:  GLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSA----DTGGIGF----TRYIIQAI--GDGD----LHDLCEKTKLTSAAKAA

XP_023006923.1 uncharacterized protein LOC111499567 [Cucurbita maxima]1.7e-3596.34Show/hide
Query:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA
        MPSKLVSPGLPLCLSGFSLSHR L+TEMEDHDRRREAMRRRRSSSAD GGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA
Subjt:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA

TrEMBL top hitse value%identityAlignment
A0A0A0KEP9 Uncharacterized protein7.1e-0845.78Show/hide
Query:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLC-EKTKLTSAAKAA
        M SK+ S GLPLC+S F+LS+  L+T++ DHDRRREAM+ R   S++         +++AI +GDL D   E   +  AAKAA
Subjt:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLC-EKTKLTSAAKAA

A0A498KGC9 Uncharacterized protein4.8e-0445.45Show/hide
Query:  GLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSA----DTGGIGF----TRYIIQAI--GDGD----LHDLCEKTKLTSAAKAA
        GLPLC+SG S  H   + EM DHDRRREAM+R+RS +         +GF     R   + I   DGD    LHDLC  + L   AKAA
Subjt:  GLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSA----DTGGIGF----TRYIIQAI--GDGD----LHDLCEKTKLTSAAKAA

A0A5D3CSY7 Uncharacterized protein1.6e-0748.19Show/hide
Query:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTK-LTSAAKAA
        M SK+ S GLPLC+S F+LS+  L+T++ DHDRRREAM+ R   S +       RY ++AI +GDL D   +T  +  AAKAA
Subjt:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTK-LTSAAKAA

A0A6J1L6A3 uncharacterized protein LOC1114995678.0e-3696.34Show/hide
Query:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA
        MPSKLVSPGLPLCLSGFSLSHR L+TEMEDHDRRREAMRRRRSSSAD GGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA
Subjt:  MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTCCAAGCTCGTCTCTCCAGGTCTTCCTCTCTGTCTTTCCGGCTTCTCTCTCTCTCATCGTCCTCTCACTACAGAGATGGAAGATCATGATCGAAGGAGGGAAGC
CATGAGAAGGCGAAGATCATCGAGTGCCGATACAGGAGGGATCGGCTTCACCAGATACATCATCCAAGCTATTGGAGATGGAGATCTTCATGATTTGTGTGAAAAAACCA
AATTAACTTCGGCTGCAAAAGCCGCTTAG
mRNA sequenceShow/hide mRNA sequence
AATCTCTTCTTTTCCCTCCCGAGAATTACAGATCTTCTTCGTCTTCTTCTTCTTCGTCGTCGTCGTACTGTGGAGAGAAATGCCGTCCAAGCTCGTCTCTCCAGGTCTTC
CTCTCTGTCTTTCCGGCTTCTCTCTCTCTCATCGTCCTCTCACTACAGAGATGGAAGATCATGATCGAAGGAGGGAAGCCATGAGAAGGCGAAGATCATCGAGTGCCGAT
ACAGGAGGGATCGGCTTCACCAGATACATCATCCAAGCTATTGGAGATGGAGATCTTCATGATTTGTGTGAAAAAACCAAATTAACTTCGGCTGCAAAAGCCGCTTAGAT
TACGAAAACACTGTCCATGATTCCACAATCTCAACTCTTTTGTGTTTGGTTTCGGATCTGTATTTTCATATTTTGTCAAAATCCTGATTTGGAGCTTCATGTATTGTTCT
CCTTTGTTTCCAACTTTACTGGATGGTTCAATGTAATCCTATTCTAATTTTACTTTCCAATCTTTTTTGGAGTTGGTTTTGTCTCTAAATTCTCGAAATTTTCATAGGTT
TATGGTTCCAATCCTTGCAAAAAATCAAGAACATGCTTGTCATCTAGTAACAAAGCAAAGTATAATCATTTAGGAAGAGAGGGAAAAGGAGAAAAGGACGTGAGAGAGTG
GATAGGCCGGATATGACACTCTAAAATGTCTGTACTGTATGAGACCACGTTTCACATGCCTTTGAGTTTAAACAAGGTTACGTCCCCGTTGATATCAACATTAATTTGTT
GTAATAAACCAAGATCTTCAAAGTAGAATCAAGACGCAAATCCACTGTAAAAATATGCAACCATATTAGCTATAATGGCAATAGTATGCAGGGGTATGTCGAAAATGCTT
TGGACGAACCAAACCATGTCGAACTCGGGCAGGACTGACCAGGAAAGTAGAGGACCAAACGAACGACACAAAAAGAGACACTATAAGAGGACATAGCTGCGCCACCGTCT
ATCAAGCACCCAATTCTGAGATTGGGTACCTGATAACCAATGCCAACAACTATGATCACCATACAAAACAGCACCAACAGAAACCGGGTCTTTATTATTCAGACATCTGA
AAACCTCGGACGAGGAGGTCTG
Protein sequenceShow/hide protein sequence
MPSKLVSPGLPLCLSGFSLSHRPLTTEMEDHDRRREAMRRRRSSSADTGGIGFTRYIIQAIGDGDLHDLCEKTKLTSAAKAA