; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20248 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20248
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA repair protein RAD51 homolog 2 isoform X1
Genome locationCarg_Chr02:4700569..4703863
RNA-Seq ExpressionCarg20248
SyntenyCarg20248
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0033063 - Rad51B-Rad51C-Rad51D-XRCC2 complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR020588 - DNA recombination and repair protein RecA-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR030548 - DNA repair protein RAD51 homologue 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570753.1 DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4589.19Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI E+ASPPYQTVLSLM+QRLQNEHL+GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

KAG7035449.1 DNA repair protein RAD51-like 2 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-52100Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

XP_022943313.1 DNA repair protein RAD51 homolog 2 isoform X2 [Cucurbita moschata]7.0e-4590.09Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI EIASPPYQTVLSLM+QRLQNEHL GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

XP_022986663.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima]7.0e-4590.09Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI EIASPPYQTVLSLM+QRLQNEHL GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

XP_022986666.1 DNA repair protein RAD51 homolog 2 isoform X2 [Cucurbita maxima]7.0e-4590.09Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI EIASPPYQTVLSLM+QRLQNEHL GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

TrEMBL top hitse value%identityAlignment
A0A0A0KFZ1 RECA_2 domain-containing protein2.2e-4488.29Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M N+L+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI EIASPPYQT LSLM+QRLQNEHL GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

A0A6J1FTX6 DNA repair protein RAD51 homolog 2 isoform X13.4e-4590.09Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI EIASPPYQTVLSLM+QRLQNEHL GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

A0A6J1FWQ4 DNA repair protein RAD51 homolog 2 isoform X23.4e-4590.09Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI EIASPPYQTVLSLM+QRLQNEHL GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

A0A6J1JBU9 DNA repair protein RAD51 homolog 2 isoform X23.4e-4590.09Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI EIASPPYQTVLSLM+QRLQNEHL GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

A0A6J1JH72 DNA repair protein RAD51 homolog 2 isoform X13.4e-4590.09Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+NQMGL +SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI EIASPPYQTVLSLM+QRLQNEHL GHLSTCLKGLDEALFGGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGPA
        FGVLTELVGPA
Subjt:  FGVLTELVGPA

SwissProt top hitse value%identityAlignment
O15315 DNA repair protein RAD51 homolog 21.0e-0631.82Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M +K + ++GL Q + +  +   I T ++ L L+  ELM++  +    V   +  +    +P  QT   +  QR   +     LST L  LDEAL GG+ 
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGP
         G LTE+ GP
Subjt:  FGVLTELVGP

O35719 DNA repair protein RAD51 homolog 21.0e-0633.33Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLT-GHLSTCLKGLDEALFGGI
        M++K + ++GL   + +  +   I   +  LSL+  ELM++  +    V   +  + +  +P  QT   L  +R  + HL+   LST L  LDEAL GG+
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLT-GHLSTCLKGLDEALFGGI

Query:  PFGVLTELVGP
        P G LTE+ GP
Subjt:  PFGVLTELVGP

Q9SK02 DNA repair protein RAD51 homolog 21.3e-3365.45Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+ +MGLH  I+NIFA R I TAK+ALS+TEFELMELLDVG+ E+ SA++ I E  SPP Q+  SL++++++NEHL+GHL T LKGLD+ L GGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGP
        FGVLTELVGP
Subjt:  FGVLTELVGP

Arabidopsis top hitse value%identityAlignment
AT2G28560.1 DNA repair (Rad51) family protein9.1e-3565.45Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+ +MGLH  I+NIFA R I TAK+ALS+TEFELMELLDVG+ E+ SA++ I E  SPP Q+  SL++++++NEHL+GHL T LKGLD+ L GGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGP
        FGVLTELVGP
Subjt:  FGVLTELVGP

AT2G28560.2 DNA repair (Rad51) family protein9.1e-3565.45Show/hide
Query:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP
        M NKL+ +MGLH  I+NIFA R I TAK+ALS+TEFELMELLDVG+ E+ SA++ I E  SPP Q+  SL++++++NEHL+GHL T LKGLD+ L GGIP
Subjt:  MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIP

Query:  FGVLTELVGP
        FGVLTELVGP
Subjt:  FGVLTELVGP

AT2G28560.3 DNA repair (Rad51) family protein1.2e-2365.38Show/hide
Query:  LTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIPFGVLTELVGP
        +TEFELMELLDVG+ E+ SA++ I E  SPP Q+  SL++++++NEHL+GHL T LKGLD+ L GGIPFGVLTELVGP
Subjt:  LTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIPFGVLTELVGP

AT2G28560.4 DNA repair (Rad51) family protein1.2e-2365.38Show/hide
Query:  LTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIPFGVLTELVGP
        +TEFELMELLDVG+ E+ SA++ I E  SPP Q+  SL++++++NEHL+GHL T LKGLD+ L GGIPFGVLTELVGP
Subjt:  LTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIPFGVLTELVGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAAATTAATGAATCAGATGGGATTACACCAATCGATAACTAATATTTTCGCAGAGCGAATTATTAACACAGCCAAGGAAGCTTTATCCTTAACTGAATTTGA
GTTGATGGAGTTATTGGACGTGGGATTGTTGGAAGTTGCATCAGCAGTTGCGCACATTATTGAAATTGCTTCTCCTCCTTATCAGACGGTGCTTTCTCTAATGGATCAAA
GACTTCAAAACGAGCATTTAACTGGCCATCTTTCTACATGTTTAAAAGGTTTAGACGAGGCCTTATTTGGTGGAATCCCATTTGGTGTCTTGACAGAGCTTGTTGGTCCA
GCTTGA
mRNA sequenceShow/hide mRNA sequence
AAACCATTCTAGGGTTTCGCATTTGGCGGGGAAGGAAAAGCGGACCGAGATAGCATGGTTTGACAGAGAGATTGAAGGAGATAGAATGACGAACAAATTAATGAATCAGA
TGGGATTACACCAATCGATAACTAATATTTTCGCAGAGCGAATTATTAACACAGCCAAGGAAGCTTTATCCTTAACTGAATTTGAGTTGATGGAGTTATTGGACGTGGGA
TTGTTGGAAGTTGCATCAGCAGTTGCGCACATTATTGAAATTGCTTCTCCTCCTTATCAGACGGTGCTTTCTCTAATGGATCAAAGACTTCAAAACGAGCATTTAACTGG
CCATCTTTCTACATGTTTAAAAGGTTTAGACGAGGCCTTATTTGGTGGAATCCCATTTGGTGTCTTGACAGAGCTTGTTGGTCCAGCTTGAATTGGCCAAACGCAATTTT
GCTTGAAACTCTCTTTATTGGCTGCTCTGCCACCGAGCTATGGAAGTTTAGATGGCAGAGTAATATATATTGATGTAGAATCTAAGTTTAGTTCCAGAAGGTCTTTTAAT
TATACCATGCTACTGGTTGTTTACTCATTATATCTGTGTAATGGGCGCATGACTTTTTTGGTTTTTCAATTCCGTCTCTCTCGGCAGGATGATTGAAATTGACATGAGAA
GCTTTCCTGATGTATTGGAAATGAAGGACATAGCACAAGAGGTCAGAGGTTCATCAAGATTGCAAAGTCTCCAATGTCTCCACCCCTACCTTTCCCTTTTATCATAACCT
CATCCTGAATTTCATTGCCAAGTGACAATTGAAAAGAACCAAGTGGAGCTGAGATCAATGAGAATCACCGTCAAGGTTTCTGTTACTCCCTAGGAAGAACGGTACTAACA
TAAACAGCGCCTTCTCTTCAATTAAAAATCTAGATGGACATAAGTTAGAAGCTCAAGGACTCTCAAAACACTTTACTCTTTGTTTTCTCTAAAACATTTTGAACTGATAG
TTGCAAATTCAATATCATTGCCTCTATGATGTTAATGACTTATCTCCCAGCTTCATTGTCTGAAATTTACCAAGAATGCTACGAGAAGTTGATGTTTTTAGTGTATTATA
TTCTATTATTAAGCCTAAGATATACTCCGTACTAGGTTTCTCTTTAGCTTTGTTGTTTTTTGGTTGTTTGACTGTATGACATTAATGCAGGACACGGTGATATTATCAGC
TATTTTTGGAAAATGAGCAACGTGAATGGGACTGCTAAAAATCTCAGGCTTGTCATGCATATACGAGACTTATGCTGAATTGGTGGTTTCCTGTTGTTAATGGTTATATT
AAGCGGATAGCTTAGAACTAACCAACCAAACATGGAAGATGGAAAAGATATCAAAGCTGCGGATGATTTTTGTGGAGAGGAATCGTTTGCCTAGTTTCTTAGTGATAAAA
ATGTT
Protein sequenceShow/hide protein sequence
MTNKLMNQMGLHQSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHIIEIASPPYQTVLSLMDQRLQNEHLTGHLSTCLKGLDEALFGGIPFGVLTELVGP
A