; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20256 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20256
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionembryo-specific protein ATS3A-like
Genome locationCarg_Chr02:4640133..4640624
RNA-Seq ExpressionCarg20256
SyntenyCarg20256
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR010417 - Embryo-specific ATS3
IPR036392 - PLAT/LH2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605503.1 Embryo-specific protein ATS3A, partial [Cucurbita argyrosperma subsp. sororia]2.5e-91100Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
        QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG

Query:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
        FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Subjt:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

KAG7035442.1 Embryo-specific protein ATS3A, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-92100Show/hide
Query:  MQKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRP
        MQKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRP
Subjt:  MQKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRP

Query:  GFVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
        GFVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Subjt:  GFVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

XP_022947116.1 embryo-specific protein ATS3A-like [Cucurbita moschata]6.8e-8995.68Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
        QKTCMY +TV+TTCT GADTSNH+SLRFGDT+SNDIVVRHLNSKHVRRVDSLEPQV+DDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG

Query:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
        FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Subjt:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

XP_023007330.1 embryo-specific protein ATS3A-like [Cucurbita maxima]1.3e-8794.44Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
        +K CMYA+TVETTCTKGADTSNH+SLRFGDT+SNDIVV HLNSKHVRRVDSLEPQV+DD+PRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG

Query:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
        FVHVRL ESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Subjt:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

XP_023532296.1 embryo-specific protein ATS3A-like [Cucurbita pepo subsp. pepo]2.0e-8895.06Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
        +KTCMY++TVETTCTKGADTSNH+SLRFGDT+SNDIVVR LNSKHVRRVDSLEPQ++DDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG

Query:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
        FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Subjt:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

TrEMBL top hitse value%identityAlignment
A0A0A0KC84 Uncharacterized protein3.2e-6880.54Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
        +K CMYA+TVET+CTKGADTSNH+SLRFGDT+SNDIVVR LN KHVRRVD LEPQV+DD+ RKPFQ CMVD FQVT KCVTSPICYLYLK++G DDWRPG
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG

Query:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKV
        FV VR  + PHLSSN FYFRRVLPRHVWHG DTC G+VTPFG+KR+RKV
Subjt:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKV

A0A1S3CK61 uncharacterized protein LOC1035018932.0e-7083.89Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
        +K CMYA+TVET+CTKGADTSNH+SLRFGDT+SNDIVVR LNSKHVRRVD LEPQV+DDI RKPFQ CMVD FQVT KCVTSPICYLYLK++GADDWRPG
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG

Query:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKV
        FV VR  E PHLSSN FYFRRVLPRHVWHG DTC G+VTPFGIKR+RKV
Subjt:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKV

A0A6J1CYS2 embryo-specific protein ATS3A-like1.1e-7381.99Show/hide
Query:  KTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGF
        KTCMYA+TVETTCTKGADTSNH+SLRFGDT+SNDIVVR LNS HV+RVD LEP+V+DD+ RKPFQACMVD FQVT KCVTSP+CY+YLK+AGADDWRPGF
Subjt:  KTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGF

Query:  VHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
        V VR  E PHLSS  FYFRRVLPRHVWHG DTC G+VTPFGIK  RKVFAASKHF RHK N
Subjt:  VHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

A0A6J1G5H5 embryo-specific protein ATS3A-like3.3e-8995.68Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
        QKTCMY +TV+TTCT GADTSNH+SLRFGDT+SNDIVVRHLNSKHVRRVDSLEPQV+DDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG

Query:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
        FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Subjt:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

A0A6J1L2N6 embryo-specific protein ATS3A-like6.2e-8894.44Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
        +K CMYA+TVETTCTKGADTSNH+SLRFGDT+SNDIVV HLNSKHVRRVDSLEPQV+DD+PRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPG

Query:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
        FVHVRL ESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN
Subjt:  FVHVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN

SwissProt top hitse value%identityAlignment
Q681K2 Embryo-specific protein ATS3A2.6e-1430.08Show/hide
Query:  CMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVH
        C Y + ++T+C+  + T + IS+ FGD   N++ V+ L                DD   + F+ C  D ++++  C+   +CYLYL   G+D W+P  V 
Subjt:  CMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVH

Query:  VRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRG
        +  S    + S  FY+   LP  VW+G + C G
Subjt:  VRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRG

Q6NPM5 Embryo-specific protein ATS3B2.4e-1230.41Show/hide
Query:  TCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFV
        TC Y + + T+C+    T + IS+ FGD   N I    L                DD   K F+ C  D FQ+   C T  ICY+YL  +G D W P  V
Subjt:  TCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFV

Query:  HVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCR----GDVTPFGIKRS
         +    S  ++   F +   +P  VW+G + C      +V   G++RS
Subjt:  HVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCR----GDVTPFGIKRS

Q9LYP6 Embryo-specific protein ATS39.4e-0928.47Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWR
        Q TC Y + V T+C     T + IS+ FGD   N +    L                  + R P     C  + FQV  +C+  PIC LY+   G D W 
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWR

Query:  PGFVHVRLSESPHLSSNNFYFRRVLPR-HVWHGLDTC
        P  + +    S    S  F F + +P+ + W+G + C
Subjt:  PGFVHVRLSESPHLSSNNFYFRRVLPR-HVWHGLDTC

Arabidopsis top hitse value%identityAlignment
AT2G41475.1 Embryo-specific protein 3, (ATS3)1.8e-1530.08Show/hide
Query:  CMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVH
        C Y + ++T+C+  + T + IS+ FGD   N++ V+ L                DD   + F+ C  D ++++  C+   +CYLYL   G+D W+P  V 
Subjt:  CMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVH

Query:  VRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRG
        +  S    + S  FY+   LP  VW+G + C G
Subjt:  VRLSESPHLSSNNFYFRRVLPRHVWHGLDTCRG

AT5G07190.1 seed gene 36.7e-1028.47Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWR
        Q TC Y + V T+C     T + IS+ FGD   N +    L                  + R P     C  + FQV  +C+  PIC LY+   G D W 
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWR

Query:  PGFVHVRLSESPHLSSNNFYFRRVLPR-HVWHGLDTC
        P  + +    S    S  F F + +P+ + W+G + C
Subjt:  PGFVHVRLSESPHLSSNNFYFRRVLPR-HVWHGLDTC

AT5G07190.2 seed gene 36.7e-1028.47Show/hide
Query:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWR
        Q TC Y + V T+C     T + IS+ FGD   N +    L                  + R P     C  + FQV  +C+  PIC LY+   G D W 
Subjt:  QKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKP--FQACMVDHFQVTAKCVTSPICYLYLKVAGADDWR

Query:  PGFVHVRLSESPHLSSNNFYFRRVLPR-HVWHGLDTC
        P  + +    S    S  F F + +P+ + W+G + C
Subjt:  PGFVHVRLSESPHLSSNNFYFRRVLPR-HVWHGLDTC

AT5G62200.1 Embryo-specific protein 3, (ATS3)1.7e-1330.41Show/hide
Query:  TCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFV
        TC Y + + T+C+    T + IS+ FGD   N I    L                DD   K F+ C  D FQ+   C T  ICY+YL  +G D W P  V
Subjt:  TCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFV

Query:  HVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCR----GDVTPFGIKRS
         +    S  ++   F +   +P  VW+G + C      +V   G++RS
Subjt:  HVRLSESPHLSSNNFYFRRVLPRHVWHGLDTCR----GDVTPFGIKRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAACTTGCATGTACGCTATCACGGTGGAAACAACGTGCACAAAGGGTGCCGACACGTCGAACCACATCAGCCTAAGATTCGGCGACACGAGTTCGAACGACAT
TGTCGTCCGACACTTGAATTCGAAGCACGTGAGGAGGGTGGATTCTTTAGAACCACAAGTTGTGGATGACATACCAAGAAAGCCGTTTCAAGCTTGCATGGTGGATCACT
TCCAAGTCACTGCAAAATGTGTCACCTCGCCGATTTGTTACCTTTACCTGAAAGTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCCATGTTCGGCTGTCGGAGAGC
CCACATCTTAGCTCAAATAATTTCTACTTCCGACGTGTACTGCCTCGACACGTTTGGCATGGATTGGACACGTGTCGTGGTGACGTCACCCCTTTTGGCATCAAACGCAG
TAGAAAAGTCTTTGCCGCAAGTAAACATTTTTTAAGGCATAAATTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAACTTGCATGTACGCTATCACGGTGGAAACAACGTGCACAAAGGGTGCCGACACGTCGAACCACATCAGCCTAAGATTCGGCGACACGAGTTCGAACGACAT
TGTCGTCCGACACTTGAATTCGAAGCACGTGAGGAGGGTGGATTCTTTAGAACCACAAGTTGTGGATGACATACCAAGAAAGCCGTTTCAAGCTTGCATGGTGGATCACT
TCCAAGTCACTGCAAAATGTGTCACCTCGCCGATTTGTTACCTTTACCTGAAAGTCGCCGGCGCCGACGACTGGCGGCCGGGATTCGTCCATGTTCGGCTGTCGGAGAGC
CCACATCTTAGCTCAAATAATTTCTACTTCCGACGTGTACTGCCTCGACACGTTTGGCATGGATTGGACACGTGTCGTGGTGACGTCACCCCTTTTGGCATCAAACGCAG
TAGAAAAGTCTTTGCCGCAAGTAAACATTTTTTAAGGCATAAATTCAATTAA
Protein sequenceShow/hide protein sequence
MQKTCMYAITVETTCTKGADTSNHISLRFGDTSSNDIVVRHLNSKHVRRVDSLEPQVVDDIPRKPFQACMVDHFQVTAKCVTSPICYLYLKVAGADDWRPGFVHVRLSES
PHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKVFAASKHFLRHKFN