; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20302 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20302
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionScarecrow-like transcription factor 11
Genome locationCarg_Chr02:4369579..4373079
RNA-Seq ExpressionCarg20302
SyntenyCarg20302
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
InterPro domainsIPR019324 - M-phase phosphoprotein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605449.1 hypothetical protein SDJN03_02766, partial [Cucurbita argyrosperma subsp. sororia]1.2e-8690Show/hide
Query:  MAKREISNTLRNLK--------------FMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQ
        MAKREISNTLRNLK               ++ AAQKEEQPKKEEEVKSEENLFPSSNIIR  VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQ
Subjt:  MAKREISNTLRNLK--------------FMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQ

Query:  RETPEPSSGNHSESSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
        RETPEPSSGNHSESSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
Subjt:  RETPEPSSGNHSESSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
KAG7035397.1 hypothetical protein SDJN02_02193, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-94100Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRNVVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSESS
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRNVVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSESS
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRNVVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSESS

Query:  RENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
        RENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
Subjt:  RENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
XP_022947916.1 uncharacterized protein LOC111451657 [Cucurbita moschata]4.5e-8996.28Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK EENLFPSSNIIR  VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETP+PSSGNHSE 
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-

Query:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
         SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGR PTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
Subjt:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
XP_023007374.1 uncharacterized protein LOC111499887 [Cucurbita maxima]5.5e-8795.21Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK EENLFPSSNIIR  VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRET + SSGNHSE 
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-

Query:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
         SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGR PTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
Subjt:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
XP_023532308.1 uncharacterized protein LOC111794500 isoform X1 [Cucurbita pepo subsp. pepo]3.8e-8895.74Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK EENLFPSSNIIR  VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETP+ SSGNHSE 
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-

Query:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
         SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGR PTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
Subjt:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
TrEMBL top hitse value%identityAlignment
A0A6J1FT40 uncharacterized protein LOC111448524 isoform X15.6e-6975.38Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSES
        MAKRE+SNTLRNLKFMQRA Q+E+QPK+EEEVK +EN FPSS IIR  VVLVEGDPHPGA +GR+SFQSFNPSID+LNEE+ASLGQ E P  SSGNHS +
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSES

Query:  ---------SRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
                  R+NGSS+NEA  SN DEKNCE N DLKRKQSEVVS+GR PTKFP+SGRDNQQSSF++GKG  KKPKGE LDWNVLRPSKTPNK G
Subjt:  ---------SRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
A0A6J1FUG1 uncharacterized protein LOC111448524 isoform X21.0e-7079.26Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-
        MAKRE+SNTLRNLKFMQRA Q+E+QPK+EEEVK +EN FPSS IIR  VVLVEGDPHPGA +GR+SFQSFNPSID+LNEE+ASLGQ E P  SSGNHS  
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-

Query:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
         SSR+NGSS+NEA  SN DEKNCE N DLKRKQSEVVS+GR PTKFP+SGRDNQQSSF++GKG  KKPKGE LDWNVLRPSKTPNK G
Subjt:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
A0A6J1G7T2 uncharacterized protein LOC1114516572.2e-8996.28Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK EENLFPSSNIIR  VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETP+PSSGNHSE 
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-

Query:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
         SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGR PTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
Subjt:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
A0A6J1JFF6 uncharacterized protein LOC111484532 isoform X25.2e-6776.6Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNH--S
        MAKRE+SNTLRNLKFMQRA Q+EE PKKEEEVK++EN FPSS IIR  VVLVEGD HPG  +GR+SFQSFNPSID+LNE+VASL Q E P  S GNH  +
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNH--S

Query:  ESSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
         SSR+NGSS+NEA  SN+DEKNCE N DLKRKQS VVS+GR PTKFP+SGRDNQQSSF++GKG  KKPKGE LDWNVLRPSKTPNK G
Subjt:  ESSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
A0A6J1L4S0 uncharacterized protein LOC1114998872.7e-8795.21Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK EENLFPSSNIIR  VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRET + SSGNHSE 
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRN-VVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE-

Query:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
         SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGR PTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
Subjt:  -SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59460.1 scarecrow-like transcription factor 11 (SCL11)3.9e-3050Show/hide
Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNII--RNVVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE
        MAKREIS+TLRNLKFMQR++ K E+ K +EE       FPS   +  + VV+ + DP PGAL GR+SFQSFNPSI+KL+EE            + GN S 
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNII--RNVVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSE

Query:  SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGR-RPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNK
        SS   G        S+  E + ET+GDLKRKQSEVVSE + RP K P+S  D    S   G G FKKPK + +DW+VLRP K   K
Subjt:  SSRENGSSRNEAVFSNNDEKNCETNGDLKRKQSEVVSEGR-RPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGCGCGAGATTTCCAATACGTTAAGAAACTTGAAGTTCATGCAAAGGGCGGCTCAGAAAGAGGAGCAACCTAAAAAAGAGGAAGAAGTAAAATCAGAGGAGAA
TTTATTTCCCTCGAGTAATATTATCAGAAATGTGGTTTTAGTTGAAGGAGATCCTCATCCTGGGGCTCTGCAAGGTCGATTGTCATTTCAAAGCTTTAATCCTTCAATTG
ATAAACTCAATGAAGAAGTAGCTAGCTTAGGTCAGCGAGAAACTCCTGAGCCTTCATCTGGGAATCACAGTGAATCATCAAGAGAAAATGGATCTTCACGAAATGAAGCA
GTGTTCTCAAACAATGATGAAAAAAATTGTGAGACTAATGGGGACCTTAAAAGGAAACAATCTGAAGTAGTGTCTGAAGGACGACGTCCAACTAAGTTTCCAAAAAGTGG
TCGGGACAATCAGCAGTCATCATTTAATAATGGTAAAGGATTCTTCAAGAAACCAAAGGGTGAAAATCTGGACTGGAATGTCCTTAGGCCCTCTAAGACTCCAAATAAGA
GGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGCGCGAGATTTCCAATACGTTAAGAAACTTGAAGTTCATGCAAAGGGCGGCTCAGAAAGAGGAGCAACCTAAAAAAGAGGAAGAAGTAAAATCAGAGGAGAA
TTTATTTCCCTCGAGTAATATTATCAGAAATGTGGTTTTAGTTGAAGGAGATCCTCATCCTGGGGCTCTGCAAGGTCGATTGTCATTTCAAAGCTTTAATCCTTCAATTG
ATAAACTCAATGAAGAAGTAGCTAGCTTAGGTCAGCGAGAAACTCCTGAGCCTTCATCTGGGAATCACAGTGAATCATCAAGAGAAAATGGATCTTCACGAAATGAAGCA
GTGTTCTCAAACAATGATGAAAAAAATTGTGAGACTAATGGGGACCTTAAAAGGAAACAATCTGAAGTAGTGTCTGAAGGACGACGTCCAACTAAGTTTCCAAAAAGTGG
TCGGGACAATCAGCAGTCATCATTTAATAATGGTAAAGGATTCTTCAAGAAACCAAAGGGTGAAAATCTGGACTGGAATGTCCTTAGGCCCTCTAAGACTCCAAATAAGA
GGGGATAACCTTGTATAGTAGAGTCTTTAGATGGGTGGAGAATCCAGTTCCTATGCTCTTGGGAAATTGTTTCGACTTCTTACCATATTTTGTAGTTAAATAGGACTGTT
AAACGTTACCTGAACAATTAATTGAAGGTTCCATTTAACGTATCTTTATCTTAAAAAATTAGATGTACCCATATATCAACTCATTGGTGTTCCTAAATTCATACATTCCT
GTACTTGGATCAAGAATGACGCCCAATACTTGGAATACTGTCTGATTTTCTAAAAACTAGATTTCTGGACTATTCAGTTGTCTTGCGAATGGAAAATAGATCCTGCAATT
TTTTTTAACAAGCAATGAGAGTGGATCTTCTGTGATGATGATATTTTATGAAATAGATCAGAATTCATCTGATTTCTCTTTGAGGTGTCTGCGATCAAATATTAGAAATC
ATTTTAGTGCTCTGCTTCATTTATGTTTGGTTTGTCTATTGTTGGTTTTATCATCTGTTTACTTTTTAGTTTCATGTGAATTGAGTGTTACTAGTGACTATTTCTACCAT
TTTGTTTTCTGGAAAGAAGAGAAGAACAAAAAAACAGACATACTTGTATTTAATATATAAGTTGGAAATAGATGTGATTTTCTCGATGAAATCTGCAAATGTTGGATATT
TCCTTTTCCCTTAGCGCCCTCAACGCAGGGATATGACAGGATATAGTGTCTCTGACTCTTCCTCTCCATCATAATGAAAATCCTCTTTCATTATATCTTTCAGATCACAG
ATAGGGCTATGCGAGATTTCTAGGCTTGGACTCTGTTAGAAGTTGCTTTATCATATGTCACTGCTCGTAGTTCTGTTTTTATTTGTTTTATGGATTATCACATCAAGTAG
ATCTTTGGGCTGGGAAACTGAAACATATAGTTCACAGCAAACTCCCCATTTCCATTCATACTCAAACCAAAATCCGCATAGTCTCCCATTTCTGGGATGTGATCCAATCA
TTCTGAAATTAGACATTAAAGCACTTGATTCATCTCAGCTGGGTCTATCCTTGTAACACGCAGTTTAGAGGCCCCAGCAGGTATGGATATGAATCGGCCATTACAAGCTA
CAATTGATAAATGTTCATTTAACAATATGATGGCCCTTCGATATCTTAGTCTCATGAAATTGGTTATGTTTTAACCTGCCTATATTTGCTACATCCTTGGACCCAATGTC
AGTTAAATTAATGTTTTCTGGTTCGCCTGTTATGTTGCTATTGAACATCAGCTGGGGGCTGATAAGGATTGAAGCCTAATCTACTCTAGTAGTTTATCTTTTATGGACAA
GGGACACAAAGACTTGTCTGAAGAGATGGCTTGTTTGTGGTAGTGGTTGAGAGATAGCTTGTTTAAGTTCTTGAAAATTTTATAAGACCCATCAAATGAGTGCAATTCAA
TTGTAGAATATTAGGATGTGTTCGATTGCTTTCAGCTTGGTAGTTTAACAATAAGTACTTCGAAACTATTCAGTCCAAAAATAAAACTTTAGTGATTTACTATACATTTT
TTAAAAGTGTGAAAGTTTAGGGTATG
Protein sequenceShow/hide protein sequence
MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKSEENLFPSSNIIRNVVLVEGDPHPGALQGRLSFQSFNPSIDKLNEEVASLGQRETPEPSSGNHSESSRENGSSRNEA
VFSNNDEKNCETNGDLKRKQSEVVSEGRRPTKFPKSGRDNQQSSFNNGKGFFKKPKGENLDWNVLRPSKTPNKRG