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Carg20305 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20305
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:11945334..11945768
RNA-Seq ExpressionCarg20305
SyntenyCarg20305
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574273.1 hypothetical protein SDJN03_28160, partial [Cucurbita argyrosperma subsp. sororia]4.3e-79100Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

XP_022945025.1 uncharacterized protein LOC111449390 isoform X1 [Cucurbita moschata]4.3e-79100Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

XP_022945026.1 uncharacterized protein LOC111449390 isoform X2 [Cucurbita moschata]4.3e-79100Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

XP_022967983.1 uncharacterized protein LOC111467357 isoform X1 [Cucurbita maxima]4.3e-79100Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

XP_023542354.1 uncharacterized protein LOC111802281 isoform X2 [Cucurbita pepo subsp. pepo]1.6e-7899.31Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        +SSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

TrEMBL top hitse value%identityAlignment
A0A6J1CI74 uncharacterized protein LOC1110117294.5e-7494.44Show/hide
Query:  MELNGKSMVS--ANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLD
        MELNGKSMVS  ANVIYLSTILGRD QV+AHKCDWKCENEHVCGNMYRCKLTG+THICDKNCDQRI+YDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLD
Subjt:  MELNGKSMVS--ANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLD

Query:  ADNSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDM
        ADNSS+DDF FKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDM
Subjt:  ADNSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDM

A0A6J1FZP7 uncharacterized protein LOC111449390 isoform X22.1e-79100Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

A0A6J1FZQ8 uncharacterized protein LOC111449390 isoform X12.1e-79100Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

A0A6J1HTL7 uncharacterized protein LOC111467357 isoform X22.1e-79100Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

A0A6J1HWR1 uncharacterized protein LOC111467357 isoform X12.1e-79100Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G49550.1 unknown protein2.8e-5266.89Show/hide
Query:  MELNGKSMV---SANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKL
        ME+ GKS V   SANVIYLS ILG +     HKCDWKCENE+VCGNMYRCKLTG+TH+CDKNC+QRI+YDNH+SLCRASG+IFPL+L EEQA++G+RRKL
Subjt:  MELNGKSMV---SANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKL

Query:  DADNSS--VDDFGFKRRRDAQFHPSPFERSFSAAVPICSQV-GDGMDM
        D ++     +    +RRRDAQFH SPFERSF+A  P CSQ  GDGM++
Subjt:  DADNSS--VDDFGFKRRRDAQFHPSPFERSFSAAVPICSQV-GDGMDM

AT5G24610.1 unknown protein2.7e-5569.59Show/hide
Query:  MELNGKS---MVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKL
        ME+ GKS   + SANVIYLS ILGRD     HKCDWKCENE+VCGNMYRCKLTG+TH+CDKNC+QRI+YDNHSSLCRASG+IFPL+  EEQA++G+RRKL
Subjt:  MELNGKS---MVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKL

Query:  D-ADNSSVDDFGFK-RRRDAQFHPSPFERSFSAAVPICSQVGDGMDMM
        D A++   +   FK RRRDAQFH SPFERSF+A  PICS  GDGM+++
Subjt:  D-ADNSSVDDFGFK-RRRDAQFHPSPFERSFSAAVPICSQVGDGMDMM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGAACGGCAAATCCATGGTCTCTGCAAACGTTATTTATCTTTCAACTATTCTGGGTAGAGATGAGCAAGTTGTTGCCCACAAATGTGATTGGAAATGTGAGAA
TGAACATGTGTGTGGTAATATGTACCGCTGCAAACTTACAGGAATGACTCACATTTGTGACAAAAACTGTGACCAAAGAATTGTGTATGATAACCATAGCTCACTTTGTC
GTGCAAGTGGGCAAATTTTCCCGCTTACACTGACAGAGGAACAAGCAATCAGAGGCATTCGCAGGAAACTTGATGCTGACAATTCCTCCGTTGATGATTTTGGTTTTAAG
CGTAGGCGGGATGCCCAGTTTCATCCTTCACCTTTTGAGAGATCTTTCTCTGCTGCCGTCCCAATTTGTAGTCAAGTTGGAGATGGCATGGATATGATGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGAACGGCAAATCCATGGTCTCTGCAAACGTTATTTATCTTTCAACTATTCTGGGTAGAGATGAGCAAGTTGTTGCCCACAAATGTGATTGGAAATGTGAGAA
TGAACATGTGTGTGGTAATATGTACCGCTGCAAACTTACAGGAATGACTCACATTTGTGACAAAAACTGTGACCAAAGAATTGTGTATGATAACCATAGCTCACTTTGTC
GTGCAAGTGGGCAAATTTTCCCGCTTACACTGACAGAGGAACAAGCAATCAGAGGCATTCGCAGGAAACTTGATGCTGACAATTCCTCCGTTGATGATTTTGGTTTTAAG
CGTAGGCGGGATGCCCAGTTTCATCCTTCACCTTTTGAGAGATCTTTCTCTGCTGCCGTCCCAATTTGTAGTCAAGTTGGAGATGGCATGGATATGATGAGCTAG
Protein sequenceShow/hide protein sequence
MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSVDDFGFK
RRRDAQFHPSPFERSFSAAVPICSQVGDGMDMMS