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Carg20312 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20312
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHeavy metal transport/detoxification superfamily protein
Genome locationCarg_Chr18:11922712..11923229
RNA-Seq ExpressionCarg20312
SyntenyCarg20312
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574268.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-7297.93Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDD-NNNNDPQAEE
        MANLQIVPAH PFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDD+ NNNNDPQAEE
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDD-NNNNDPQAEE

Query:  EGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        EGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  EGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

KAG7013336.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-75100Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE

Query:  GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

XP_022945716.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita moschata]3.5e-7399.31Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW NNDDDDNNNNDPQAEEE
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE

Query:  GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

XP_022968373.1 heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima]3.3e-7195.24Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDD---DNNNNDPQA
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDY+EQKVTVWGICNKNQVLSTVRSKRKAARFWN +DDD   +NNNNDPQA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDD---DNNNNDPQA

Query:  EEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        EEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  EEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

XP_023542922.1 heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pepo]3.9e-7297.92Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDY+EQKVTVWGICNKNQVLSTVRSKRKAARFW N DDDDNNNNDPQAEEE
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE

Query:  GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

TrEMBL top hitse value%identityAlignment
A0A3Q7FME6 HMA domain-containing protein1.0e-3359.71Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNND-----DDDNNNNDP
        MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+E+QKVT+WGICNK  VL+ VRSKRKAARFWN  D     + D++++ P
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNND-----DDDNNNNDP

Query:  QAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYS
         A    +  R     + + RSLS KLA KK F  TRSYS
Subjt:  QAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYS

A0A6J1CHX5 uncharacterized protein LOC1110116611.8e-3868.79Show/hide
Query:  MANLQIVPAHT--PFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAE
        MA L IVPA T   ++VEPQLVEMMVPLYSHGCANK+HKALSHLKGIYSVNVD  +QKVTVWGICNK QVLSTVRSKRKAARFWN+  + + +N+ P   
Subjt:  MANLQIVPAHT--PFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAE

Query:  EEGLN-SRRPSFGVNKLRSLSFKLACKKV--FTTTRSYSLR
              S RP F V   RSLS KLACKKV   TT RSYS R
Subjt:  EEGLN-SRRPSFGVNKLRSLSFKLACKKV--FTTTRSYSLR

A0A6J1G1N8 protein SODIUM POTASSIUM ROOT DEFECTIVE 21.7e-7399.31Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW NNDDDDNNNNDPQAEEE
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEE

Query:  GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  GLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

A0A6J1HXU2 heavy metal-associated isoprenylated plant protein 281.6e-7195.24Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDD---DNNNNDPQA
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDY+EQKVTVWGICNKNQVLSTVRSKRKAARFWN +DDD   +NNNNDPQA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDD---DNNNNDPQA

Query:  EEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        EEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  EEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

M0ZIL1 HMA domain-containing protein8.6e-3362.96Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDD-DDNNNNDPQAEE
        MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+KGIYSVNVD+E+QKVTVWGICNK  VL+TVRSKRKAARFWN  D+ ++ +  D  A  
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDD-DDNNNNDPQAEE

Query:  EGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYS
              RP   + + RSLS+KLA KK F  TRSYS
Subjt:  EGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYS

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 454.6e-0735.94Show/hide
Query:  LVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW
        +VE++V +   GC  K+ +A+S L G+ +V +D + QKVTV G  ++ +VL  V+   + A +W
Subjt:  LVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW

F4IC29 Heavy metal-associated isoprenylated plant protein 285.0e-0633.82Show/hide
Query:  VEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW
        ++ Q +EM V +   GC +++  AL  ++G+ +V +D  +QKVTV G  ++ +VL  VR   + A  W
Subjt:  VEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW

O65657 Heavy metal-associated isoprenylated plant protein 238.6e-0638.46Show/hide
Query:  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW
        Q VE+ V +   GC  KI  +LS LKG+ +V ++ ++QKVTV G  + ++VL   ++  K A  W
Subjt:  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW

Q84K70 Heavy metal-associated isoprenylated plant protein 311.9e-0546.15Show/hide
Query:  VEMMVP-LYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGI-CNKNQVLSTVRSKRKAARFW
        VE+ VP L   GCA+K+ K L  LKG+  V V+ E QKVT  G    + +VL  VR   KAA  W
Subjt:  VEMMVP-LYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGI-CNKNQVLSTVRSKRKAARFW

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 12.0e-0746.15Show/hide
Query:  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW
        Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K A+FW
Subjt:  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW

Arabidopsis top hitse value%identityAlignment
AT3G56891.1 Heavy metal transport/detoxification superfamily protein3.2e-0835.94Show/hide
Query:  LVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW
        +VE++V +   GC  K+ +A+S L G+ +V +D + QKVTV G  ++ +VL  V+   + A +W
Subjt:  LVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW

AT4G27590.1 Heavy metal transport/detoxification superfamily protein3.1e-2764.84Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNN
        M +LQIVP +    VE Q VEMMVPLYS+GC  K+ +ALSHLKGIYSV VDY  QKVTVWGICNK  VL+ V+ KRK ARFWN  ++++NN
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNN

AT4G27590.2 Heavy metal transport/detoxification superfamily protein3.1e-2764.84Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNN
        M +LQIVP +    VE Q VEMMVPLYS+GC  K+ +ALSHLKGIYSV VDY  QKVTVWGICNK  VL+ V+ KRK ARFWN  ++++NN
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNN

AT5G02600.1 Heavy metal transport/detoxification superfamily protein1.5e-0846.15Show/hide
Query:  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW
        Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K A+FW
Subjt:  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW

AT5G02600.2 Heavy metal transport/detoxification superfamily protein1.5e-0846.15Show/hide
Query:  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW
        Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K A+FW
Subjt:  QLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAA
GGCTCTCTCCCATCTCAAAGGGATATATTCAGTTAACGTAGATTACGAGGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAA
GCAAGAGAAAAGCAGCTCGTTTTTGGAACAATAATGATGATGATGATAATAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGT
GTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAA
GGCTCTCTCCCATCTCAAAGGGATATATTCAGTTAACGTAGATTACGAGGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAA
GCAAGAGAAAAGCAGCTCGTTTTTGGAACAATAATGATGATGATGATAATAATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGT
GTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA
Protein sequenceShow/hide protein sequence
MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEEGLNSRRPSFG
VNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS