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Carg20315 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20315
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S acidic ribosomal protein P1-like
Genome locationCarg_Chr18:11911147..11912061
RNA-Seq ExpressionCarg20315
SyntenyCarg20315
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574265.1 60S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. sororia]3.0e-48100Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
        MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

XP_022140845.1 60S acidic ribosomal protein P1-like [Momordica charantia]2.6e-4494.59Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGG-AASAAAPAVEEKKEEPKEE
        MSTSELACAYAA+AL+DDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAA VSVAAPAGG AASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGG-AASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022945965.1 60S acidic ribosomal protein P1-like [Cucurbita moschata]3.0e-48100Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
        MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

XP_022968593.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]2.5e-4798.18Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
        MSTSEL CAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEK+EEPKEES
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

XP_023551718.1 60S acidic ribosomal protein P1 [Cucurbita pepo subsp. pepo]3.4e-4495.5Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGA-ASAAAPAVEEKKEEPKEE
        MS+SELACAYAALAL+DDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAA VSVAA AGGA ASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGA-ASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A6J1CGB2 60S acidic ribosomal protein P1-like1.3e-4494.59Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGG-AASAAAPAVEEKKEEPKEE
        MSTSELACAYAA+AL+DDGIAITA+KIAAVVAAAGLCVESYWPSLFAKLAEKR+IGDLLLNVGCGGGAAA VSVAAPAGG AASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGG-AASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1E4K8 60S acidic ribosomal protein P18.2e-4494.59Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGA-ASAAAPAVEEKKEEPKEE
        MS+SELACAYAALAL+DDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAA VSVAA A GA ASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGA-ASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1G2H4 60S acidic ribosomal protein P1-like1.4e-48100Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
        MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

A0A6J1HYH2 60S acidic ribosomal protein P1-like1.2e-4798.18Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
        MSTSEL CAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEK+EEPKEES
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

A0A6J1JAB2 60S acidic ribosomal protein P12.8e-4495.5Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGA-ASAAAPAVEEKKEEPKEE
        MS SELACAYAALAL+DDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAA VSVAA AGGA ASAAAPAVEEKKEEPKEE
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGA-ASAAAPAVEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-24.2e-2966.37Show/hide
Query:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAA-VSVAAP-AGGAASAAAPAVEEKKEEPK
        MST  ELAC+YA + L D+GIAIT+DKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG   A VS AAP A G A+AAAPA EEKK+EP 
Subjt:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAA-VSVAAP-AGGAASAAAPAVEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

P29763 60S acidic ribosomal protein P19.7e-2661.82Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
        MSTSELAC YAAL LHDDG+ ITAD I  +  AAG+ VE YWP+LFAKL  K+ + DL+ NVG GGGAA A +  A  G  A+ AAP  EEKKE  +EE 
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES

Query:  DDDMGFSLFD
          DMGFSLFD
Subjt:  DDDMGFSLFD

P52855 60S acidic ribosomal protein P16.7e-3575.45Show/hide
Query:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES
        M++ ELAC YAAL L DDGIAITA+KIA +V AA + VESYWP+LFAKL EKR++ DL+L+VG GGG AA V+ AAPAGGAA+AAAPAVEEKKEE KEES
Subjt:  MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-11.7e-3066.07Show/hide
Query:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEE-KKEEPKE
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  A V+ AAPA G  +AAAPA EE KK+EP E
Subjt:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-32.9e-3067.26Show/hide
Query:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAP-AGGAASAAAPAVEE-KKEEPK
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  A V+ AAP AGG A+AAAPA EE KK+EP 
Subjt:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAP-AGGAASAAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family1.2e-3166.07Show/hide
Query:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEE-KKEEPKE
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  A V+ AAPA G  +AAAPA EE KK+EP E
Subjt:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.2 60S acidic ribosomal protein family1.2e-3166.07Show/hide
Query:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEE-KKEEPKE
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  A V+ AAPA G  +AAAPA EE KK+EP E
Subjt:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.4 60S acidic ribosomal protein family1.2e-3166.07Show/hide
Query:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEE-KKEEPKE
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  A V+ AAPA G  +AAAPA EE KK+EP E
Subjt:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family2.1e-3167.26Show/hide
Query:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAP-AGGAASAAAPAVEE-KKEEPK
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  A V+ AAP AGG A+AAAPA EE KK+EP 
Subjt:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAP-AGGAASAAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family2.1e-3167.26Show/hide
Query:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAP-AGGAASAAAPAVEE-KKEEPK
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  A V+ AAP AGG A+AAAPA EE KK+EP 
Subjt:  MST-SELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAP-AGGAASAAAPAVEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCAGTGAGCTTGCTTGCGCCTACGCCGCCCTGGCTCTTCACGATGATGGAATTGCAATCACTGCGGACAAGATTGCAGCCGTAGTAGCAGCTGCAGGGCTCTG
TGTGGAATCCTACTGGCCTAGCCTGTTTGCGAAGTTGGCGGAGAAGAGGGATATTGGGGACCTTCTTCTGAACGTTGGCTGTGGTGGCGGCGCTGCGGCTGCTGTGTCTG
TAGCTGCTCCTGCTGGTGGTGCTGCGTCTGCTGCCGCTCCTGCCGTTGAGGAAAAGAAGGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGCTTATTCGAT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTACCAGTGAGCTTGCTTGCGCCTACGCCGCCCTGGCTCTTCACGATGATGGAATTGCAATCACTGCGGACAAGATTGCAGCCGTAGTAGCAGCTGCAGGGCTCTG
TGTGGAATCCTACTGGCCTAGCCTGTTTGCGAAGTTGGCGGAGAAGAGGGATATTGGGGACCTTCTTCTGAACGTTGGCTGTGGTGGCGGCGCTGCGGCTGCTGTGTCTG
TAGCTGCTCCTGCTGGTGGTGCTGCGTCTGCTGCCGCTCCTGCCGTTGAGGAAAAGAAGGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGCTTATTCGAT
TAG
Protein sequenceShow/hide protein sequence
MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAAVSVAAPAGGAASAAAPAVEEKKEEPKEESDDDMGFSLFD