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Carg20316 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20316
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:11903060..11906786
RNA-Seq ExpressionCarg20316
SyntenyCarg20316
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574264.1 Polyadenylate-binding protein-interacting protein 11, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2476.54Show/hide
Query:  MLRARGKGEGKRKTEFHLIGHFWDAVPLSSPPQSDDLILSSPPTTPPLPFLNSRTGVFLLCSILFNSASAPSLRSPAAFTP
        MLRARGKGEGKRKTEFHLIGHFWDAVPLSSPPQSDDLILSSPPTTPPLPFLNSRTG+   C  L       +L++   FTP
Subjt:  MLRARGKGEGKRKTEFHLIGHFWDAVPLSSPPQSDDLILSSPPTTPPLPFLNSRTGVFLLCSILFNSASAPSLRSPAAFTP
KAG7013332.1 hypothetical protein SDJN02_26091 [Cucurbita argyrosperma subsp. argyrosperma]5.6e-42100Show/hide
Query:  MLRARGKGEGKRKTEFHLIGHFWDAVPLSSPPQSDDLILSSPPTTPPLPFLNSRTGVFLLCSILFNSASAPSLRSPAAFTPLPMEMC
        MLRARGKGEGKRKTEFHLIGHFWDAVPLSSPPQSDDLILSSPPTTPPLPFLNSRTGVFLLCSILFNSASAPSLRSPAAFTPLPMEMC
Subjt:  MLRARGKGEGKRKTEFHLIGHFWDAVPLSSPPQSDDLILSSPPTTPPLPFLNSRTGVFLLCSILFNSASAPSLRSPAAFTPLPMEMC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGGCGAGGGGAAAAGGGGAGGGGAAGAGGAAGACGGAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGCCACTCTCATCTCCACCGCAATCCGACGATCT
GATTCTGAGCAGCCCACCAACAACACCACCCTTACCTTTTCTTAATTCGCGCACAGGGGTTTTCCTTCTCTGTTCGATCCTCTTCAATTCTGCTTCTGCTCCCTCACTTC
GATCTCCTGCTGCCTTCACTCCTTTACCAATGGAAATGTGTTAG
mRNA sequenceShow/hide mRNA sequence
TGAAATATGTTGAGGGCGAGGGGAAAAGGGGAGGGGAAGAGGAAGACGGAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGCCACTCTCATCTCCACCGCAATCCGA
CGATCTGATTCTGAGCAGCCCACCAACAACACCACCCTTACCTTTTCTTAATTCGCGCACAGGGGTTTTCCTTCTCTGTTCGATCCTCTTCAATTCTGCTTCTGCTCCCT
CACTTCGATCTCCTGCTGCCTTCACTCCTTTACCAATGGAAATGTGTTAGATACATAACCCCTGCCCTCCCCTCAGAATAACACTGCAAAACAACCGCCTTTTCACCCCT
ACTCTTTCTCTTATCATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGA
TGTTGAGACTCAGAATCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAATGATCACGATGTACAGATGAAGGCACAGCTTCAGG
AGAGAGCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCCCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAG
TCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAA
ATTGAATCCCATGGCTGAGGAATTTATCCCTCCCTCGCTTGCTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTA
ATTCTGTCAACAACGAAGGGCATATGAATCGAAGGAAGAAGAATGGTTTTAGCCAAGGGAGAAGGAGGATGAATAATAAGATGAATGCGGTGAAGAGGGATGAGATGACC
CGGAGGACGGTGTATGTATCAGACATCGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTGGCTGTGGAGAGGTAGCGGGTTATTCTCTTTCCTTTCATCG
GTGATCCCAACTCAATTCTTCATTTTGCCTTCATTGAGTTCACGGATGAAGAGGGTGCAAGAGCTTCCTTGAGTCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTTAGA
GTGCTGCCCTCAAAAACTGCCATAGCACCTGTCAATCCTGACTTTTTACCCAGGTCGGATGATGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAA
GAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCTTTTGTTG
AGTTTACCATGGCTGAGAGTGCAATTGCTGCACTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTAAGCCCATCAAAGACCCCAGTTCGCCCTCGCTCT
CCTCGTGCCCAGCTGAACTGATGCTCCCTGCTTCTATCCCATGTGGGCTTAGTGCCCAATAGATATATTTATATATATATATATATATTGCATATATA
Protein sequenceShow/hide protein sequence
MLRARGKGEGKRKTEFHLIGHFWDAVPLSSPPQSDDLILSSPPTTPPLPFLNSRTGVFLLCSILFNSASAPSLRSPAAFTPLPMEMC