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Carg20357 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20357
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionarabinogalactan peptide 22-like
Genome locationCarg_Chr18:11707263..11708218
RNA-Seq ExpressionCarg20357
SyntenyCarg20357
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140891.1 arabinogalactan peptide 22-like [Momordica charantia]3.8e-1984.62Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MAV RACFGIYA IIAI +V++LPVSRAEH+SSPAPAP+SDGT IDQGIAYILMLLAL LTYIIH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

XP_022945187.1 arabinogalactan peptide 22-like [Cucurbita moschata]4.0e-24100Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

XP_022968216.1 arabinogalactan peptide 22-like isoform X1 [Cucurbita maxima]6.3e-2294.03Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MA LRACFG+YAVIIAIFYVVMLPVSRAEHASS  PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH

XP_022968217.1 arabinogalactan peptide 22-like isoform X2 [Cucurbita maxima]6.3e-2294.03Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MA LRACFG+YAVIIAIFYVVMLPVSRAEHASS  PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH

XP_038898060.1 arabinogalactan protein 41-like [Benincasa hispida]4.2e-1883.33Show/hide
Query:  MAVLRACFGIY-AVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MAVL+ACFGIY AVIIA+FYVV LPVS AE +SSPAPAPTSDGT IDQGIAY+LML+AL LTYIIH
Subjt:  MAVLRACFGIY-AVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

TrEMBL top hitse value%identityAlignment
A0A5D3BTZ5 Arabinogalactan peptide 221.5e-1680.6Show/hide
Query:  MAVLRA-CFGIY-AVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MAVLRA CFGIY AV+IA+FYV+ LPVS AE +SSPAPAPTSDGT IDQGIAY+LML+AL LTYIIH
Subjt:  MAVLRA-CFGIY-AVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

A0A6J1CHE0 arabinogalactan peptide 22-like1.9e-1984.62Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MAV RACFGIYA IIAI +V++LPVSRAEH+SSPAPAP+SDGT IDQGIAYILMLLAL LTYIIH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

A0A6J1G081 arabinogalactan peptide 22-like1.9e-24100Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

A0A6J1HT15 arabinogalactan peptide 22-like isoform X23.1e-2294.03Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MA LRACFG+YAVIIAIFYVVMLPVSRAEHASS  PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH

A0A6J1HU96 arabinogalactan peptide 22-like isoform X13.1e-2294.03Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MA LRACFG+YAVIIAIFYVVMLPVSRAEHASS  PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 167.1e-0855.77Show/hide
Query:  IIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        + +  + V+L ++ A+ + +PAPAPTSDGT+IDQGIAY+LM++AL LTY+IH
Subjt:  IIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

Q8L9T8 Arabinogalactan protein 414.0e-1156.92Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        M+  R  FG+ + I++I + ++LP++ A+ A +PAPAPTSDGT IDQGIAY+LML+AL LTY+IH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

Q9FK16 Arabinogalactan protein 221.4e-1161.54Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MA L+    I AV + I  V++LP++++ H+SSPAPAPTSDGT+IDQGIAY+LM++ALALTY IH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

Q9M373 Arabinogalactan protein 204.1e-0859.26Show/hide
Query:  IIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        +IA+F  V   +S    A S  PAP+PTSDGT+IDQGIAY+LM++AL LTY+IH
Subjt:  IIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 165.0e-0955.77Show/hide
Query:  IIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        + +  + V+L ++ A+ + +PAPAPTSDGT+IDQGIAY+LM++AL LTY+IH
Subjt:  IIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

AT3G61640.1 arabinogalactan protein 202.9e-0959.26Show/hide
Query:  IIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        +IA+F  V   +S    A S  PAP+PTSDGT+IDQGIAY+LM++AL LTY+IH
Subjt:  IIAIFYVVMLPVSRAEHASS--PAPAPTSDGTAIDQGIAYILMLLALALTYIIH

AT5G24105.1 arabinogalactan protein 412.8e-1256.92Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        M+  R  FG+ + I++I + ++LP++ A+ A +PAPAPTSDGT IDQGIAY+LML+AL LTY+IH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH

AT5G53250.1 arabinogalactan protein 229.8e-1361.54Show/hide
Query:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH
        MA L+    I AV + I  V++LP++++ H+SSPAPAPTSDGT+IDQGIAY+LM++ALALTY IH
Subjt:  MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTTGAGGGCTTGTTTTGGAATCTATGCTGTGATTATTGCTATCTTTTATGTTGTCATGTTGCCTGTATCTCGAGCTGAGCATGCCTCTTCTCCAGCTCCGGC
TCCCACTAGCGATGGCACCGCAATAGACCAAGGCATAGCATACATTCTAATGCTGCTGGCTTTAGCGCTCACTTATATCATCCATTGA
mRNA sequenceShow/hide mRNA sequence
CAAATCCCTCCATAGCCATCCTCATTCACAGCTCTCAATTTTCTTCTTCTTCTTCTTCTTCTTGTTCTTCTTGTTTTTCTGTCTTTTATTGAGGAAGAAAGGGCATTTTG
GATTGAACAGAGACAGAGATGGCTGTTTTGAGGGCTTGTTTTGGAATCTATGCTGTGATTATTGCTATCTTTTATGTTGTCATGTTGCCTGTATCTCGAGCTGAGCATGC
CTCTTCTCCAGCTCCGGCTCCCACTAGCGATGGCACCGCAATAGACCAAGGCATAGCATACATTCTAATGCTGCTGGCTTTAGCGCTCACTTATATCATCCATTGATGCA
ACCTCCAAAAGCACCAAAAACAGAAGAAGCTCCAATTATGTGTATGAGATGAAGGGAGGAGGGCGTGGTGTTTCAAATGCCTTTTACCTTTTTTTTTTCCTTCTTTTTTT
TTTTTTGAAAGATTGGCAGAGATTTCATTTGTAGAAAGTCAGTTGTATTATTATATA
Protein sequenceShow/hide protein sequence
MAVLRACFGIYAVIIAIFYVVMLPVSRAEHASSPAPAPTSDGTAIDQGIAYILMLLALALTYIIH