; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20378 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20378
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionK-box region and MADS-box transcription factor family protein
Genome locationCarg_Chr01:2218796..2219277
RNA-Seq ExpressionCarg20378
SyntenyCarg20378
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607077.1 Agamous-like MADS-box protein FUL-L, partial [Cucurbita argyrosperma subsp. sororia]2.7e-26100Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

KAG7036769.1 Agamous-like MADS-box protein AGL8-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.7e-26100Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

XP_022949125.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata]2.7e-26100Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

XP_022998763.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima]8.7e-2597.18Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        MEIIQ NIR YLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

XP_023525356.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo]2.3e-2598.59Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        MEIIQKNIR YLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

TrEMBL top hitse value%identityAlignment
A0A0A0KW39 K-box domain-containing protein1.4e-2385.92Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +EI+QKN+RHYLGE+L+PLNLRELQSLEQQLD+SLKRIR+RKNQLMQESIS+LHKKE++LQEENRQLANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

A0A6J1GBW9 truncated transcription factor CAULIFLOWER A-like1.3e-26100Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

A0A6J1GTY2 truncated transcription factor CAULIFLOWER A-like4.7e-2490.14Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +EI+QKN+RHYLGEEL+PLNLRELQSLEQQLDSSLKRIRARKNQLMQESIS LHKKE+ELQEENR+LANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

A0A6J1J006 truncated transcription factor CAULIFLOWER A-like4.7e-2490.14Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +EI+QKN+RHYLGEEL+PLNLRELQSLEQQLDSSLKRIRARKNQLMQESIS LHKKE+ELQEENR+LANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

A0A6J1KHN7 truncated transcription factor CAULIFLOWER A-like4.2e-2597.18Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        MEIIQ NIR YLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

SwissProt top hitse value%identityAlignment
D7KQR8 Transcription factor CAULIFLOWER2.9e-1556.34Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E++++N RHYLGE+LEP++L++LQ+LEQQL+++LK IR+RKNQLM ES++ L +KE E+QEEN  L  ++
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

D7SMN6 Agamous-like MADS-box protein FUL-L8.2e-1866.2Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E++Q+N+RH++GE+L+PL+LRELQ+LEQQLD++LKRIR RKNQLM ESIS L KKE+ L E+N  LA KV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

Q39081 Transcription factor CAULIFLOWER5.9e-1657.75Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E++++N RHYLGEELEP++L++LQ+LEQQL+++LK IR+RKNQLM ES++ L +KE+E+QEEN  L  ++
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

Q40170 Agamous-like MADS-box protein AGL8 homolog4.1e-1763.38Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E++Q+N +HY+GE+LE L+++ELQ+LE QLDS+LK IR+RKNQLM ESIS+L KK+R LQE+N QL+ KV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

Q42429 Agamous-like MADS-box protein AGL8 homolog3.1e-1763.38Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E++Q+N +HY+GE+LE LN++ELQ+LE QLDS+LK IR+RKNQLM ESIS+L K++R LQE+N QL+ KV
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

Arabidopsis top hitse value%identityAlignment
AT1G26310.1 K-box region and MADS-box transcription factor family protein4.2e-1757.75Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E++++N RHYLGEELEP++L++LQ+LEQQL+++LK IR+RKNQLM ES++ L +KE+E+QEEN  L  ++
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

AT1G69120.1 K-box region and MADS-box transcription factor family protein6.7e-1554.93Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E++++N RHYLGE+L+ ++ +ELQ+LEQQLD++LK IR RKNQLM ESI+ L KKE+ +QE+N  L+ ++
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

AT3G30260.1 AGAMOUS-like 796.3e-1351.43Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANK
        ++++Q+++RH  GEE++ L++R+LQ +E QLD++LK+ R+RKNQLM ESI+ L KKE+EL+E  +QL  K
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANK

AT5G60910.1 AGAMOUS-like 87.4e-1453.52Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E+++KN R+++GE+L+ L+L+ELQSLE QLD+++K IR+RKNQ M ESIS L KK++ LQ+ N  L  K+
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV

AT5G60910.2 AGAMOUS-like 87.4e-1453.52Show/hide
Query:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV
        +E+++KN R+++GE+L+ L+L+ELQSLE QLD+++K IR+RKNQ M ESIS L KK++ LQ+ N  L  K+
Subjt:  MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTATACAGAAGAACATCAGGCATTATTTGGGAGAAGAGCTTGAGCCTTTGAATTTGAGAGAACTTCAAAGCTTGGAGCAGCAACTTGATTCATCACTGAAGCG
CATAAGAGCCAGAAAGAACCAACTAATGCAAGAATCTATCTCATTGCTACACAAAAAGGAAAGGGAACTGCAAGAGGAGAACAGGCAGCTTGCAAACAAGGTATAA
mRNA sequenceShow/hide mRNA sequence
AGTACCCAAAAATTGCAGCCAGAATGGAAATTATACAGAAGAACATCAGGCATTATTTGGGAGAAGAGCTTGAGCCTTTGAATTTGAGAGAACTTCAAAGCTTGGAGCAG
CAACTTGATTCATCACTGAAGCGCATAAGAGCCAGAAAGAACCAACTAATGCAAGAATCTATCTCATTGCTACACAAAAAGGAAAGGGAACTGCAAGAGGAGAACAGGCA
GCTTGCAAACAAGGTATAA
Protein sequenceShow/hide protein sequence
MEIIQKNIRHYLGEELEPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKV