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Carg20383 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20383
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:2246997..2248137
RNA-Seq ExpressionCarg20383
SyntenyCarg20383
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607083.1 hypothetical protein SDJN03_00425, partial [Cucurbita argyrosperma subsp. sororia]2.1e-8490.86Show/hide
Query:  MSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNFEDQKKDFGVNRKNLGI
        MSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNFEDQKKDFGVNRKNLGI
Subjt:  MSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNFEDQKKDFGVNRKNLGI

Query:  KNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEPMH
        KNCKNVDAKKLNLAGF                 ESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEPMH
Subjt:  KNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEPMH

KAG7018189.1 hypothetical protein SDJN02_20057, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-3953.73Show/hide
Query:  SLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSAR-----KRIMR-----NDERDDQQVQDSSRISGANHYDSNFEDQKKDFGVNRK
        SLSHALQD  +  P++ +       SL +EETLVGFD + +RKMG+ R     KRIMR     NDER++++ Q+SSRISG    + N ED+K DFGV   
Subjt:  SLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSAR-----KRIMR-----NDERDDQQVQDSSRISGANHYDSNFEDQKKDFGVNRK

Query:  NLGIKNCKNVDAKKLNLAGFVTFGK-----NKSFQTSQPNHQESISSRH------SKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEPM
           +KNCKN   +K N+AGFVTFG+     NK  QTSQ NHQ++  ++       SKRV  + E+TQRLVKAAREIANLMH+DYKDW HRKPPINN EP+
Subjt:  NLGIKNCKNVDAKKLNLAGFVTFGK-----NKSFQTSQPNHQESISSRH------SKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEPM

Query:  H
        H
Subjt:  H

KAG7036774.1 hypothetical protein SDJN02_00394, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-106100Show/hide
Query:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNF
        MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNF
Subjt:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNF

Query:  EDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP
        EDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP
Subjt:  EDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP

Query:  MH
        MH
Subjt:  MH

XP_022949289.1 uncharacterized protein LOC111452688 [Cucurbita moschata]7.1e-7276.73Show/hide
Query:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNF
        MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGS RKRIMRNDERDD++VQDSSRIS         
Subjt:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNF

Query:  EDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP
                                           GKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP
Subjt:  EDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP

Query:  MH
        MH
Subjt:  MH

XP_022998256.1 uncharacterized protein LOC111492947 [Cucurbita maxima]6.7e-6271.29Show/hide
Query:  MKKKKILSLVICFLFLMSPLSHSLSHA-LQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSN
        MKKKKILSLVI  LFLMSPLS SLSHA LQDGT VEPVIP VNVELSKSLLREETLVGFDGIGLRKMG+ RKRIMRNDERDDQQVQDSSRIS        
Subjt:  MKKKKILSLVICFLFLMSPLSHSLSHA-LQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSN

Query:  FEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISS------RHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKP
                                            GKNKSFQTSQPNHQES+SS      RHSKRVLKK EDTQRLVKAAREIANLMHRDYKDWAHRKP
Subjt:  FEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISS------RHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKP

Query:  PINNYEPMH
        PINNYEPMH
Subjt:  PINNYEPMH

TrEMBL top hitse value%identityAlignment
A0A0A0L0U7 Uncharacterized protein2.1e-2946.51Show/hide
Query:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREE-TLVGFDGIGLRKMGSARKRI-----------MRNDERDDQQVQDSS
        M K   LSL I  LFL+SPLSHSLSHALQD T  EP +P +  ELS+S L EE  LVGFD IGLRKMGS RKR+             ND R  Q+ +++S
Subjt:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREE-TLVGFDGIGLRKMGSARKRI-----------MRNDERDDQQVQDSS

Query:  RISGANHYDSNFEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRV-LKKHEDTQRLVKAAREIANLMHRDYKD
        RISG     SN   Q      +++ +     KN                          H   + S + KRV L + ++TQRL+KAAREIANLMH+DYK+
Subjt:  RISGANHYDSNFEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRV-LKKHEDTQRLVKAAREIANLMHRDYKD

Query:  WAHRKPPINNYEPMH
        WAHRKPPINN EP+H
Subjt:  WAHRKPPINNYEPMH

A0A1S3C168 uncharacterized protein LOC1034957121.5e-2746.48Show/hide
Query:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREE-TLVGFDGIGLRKMGSARKRI---------MRNDERDDQQVQDSSRI
        M K   LSL I  LFL+SPLSHSLSHALQD T  EP +P +  ELS+S   EE  LVGFD IGLRKMGS RKR+         +     + Q+ ++SSRI
Subjt:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREE-TLVGFDGIGLRKMGSARKRI---------MRNDERDDQQVQDSSRI

Query:  SGANHYDSNFEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRV-LKKHEDTQRLVKAAREIANLMHRDYKDWA
        SG     SN   Q     VN         + +DAK+  ++                 H   +   +SKRV L + +++QRL+KAAREIANLMH+DYK+WA
Subjt:  SGANHYDSNFEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRV-LKKHEDTQRLVKAAREIANLMHRDYKDWA

Query:  HRKPPINNYEPMH
        HRKPPINN EP+H
Subjt:  HRKPPINNYEPMH

A0A5A7UKD7 Uncharacterized protein1.5e-2746.48Show/hide
Query:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREE-TLVGFDGIGLRKMGSARKRI---------MRNDERDDQQVQDSSRI
        M K   LSL I  LFL+SPLSHSLSHALQD T  EP +P +  ELS+S   EE  LVGFD IGLRKMGS RKR+         +     + Q+ ++SSRI
Subjt:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREE-TLVGFDGIGLRKMGSARKRI---------MRNDERDDQQVQDSSRI

Query:  SGANHYDSNFEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRV-LKKHEDTQRLVKAAREIANLMHRDYKDWA
        SG     SN   Q     VN         + +DAK+  ++                 H   +   +SKRV L + +++QRL+KAAREIANLMH+DYK+WA
Subjt:  SGANHYDSNFEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRV-LKKHEDTQRLVKAAREIANLMHRDYKDWA

Query:  HRKPPINNYEPMH
        HRKPPINN EP+H
Subjt:  HRKPPINNYEPMH

A0A6J1GCE6 uncharacterized protein LOC1114526883.5e-7276.73Show/hide
Query:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNF
        MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGS RKRIMRNDERDD++VQDSSRIS         
Subjt:  MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNF

Query:  EDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP
                                           GKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP
Subjt:  EDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEP

Query:  MH
        MH
Subjt:  MH

A0A6J1K9R9 uncharacterized protein LOC1114929473.2e-6271.29Show/hide
Query:  MKKKKILSLVICFLFLMSPLSHSLSHA-LQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSN
        MKKKKILSLVI  LFLMSPLS SLSHA LQDGT VEPVIP VNVELSKSLLREETLVGFDGIGLRKMG+ RKRIMRNDERDDQQVQDSSRIS        
Subjt:  MKKKKILSLVICFLFLMSPLSHSLSHA-LQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSN

Query:  FEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISS------RHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKP
                                            GKNKSFQTSQPNHQES+SS      RHSKRVLKK EDTQRLVKAAREIANLMHRDYKDWAHRKP
Subjt:  FEDQKKDFGVNRKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISS------RHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKP

Query:  PINNYEPMH
        PINNYEPMH
Subjt:  PINNYEPMH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAGAAGATCTTGAGCTTAGTTATTTGCTTTCTCTTTCTAATGTCTCCCCTTTCCCACTCTCTCTCTCATGCTCTACAAGATGGCACTGTTGTCGAACCAGT
AATACCTGTTGTAAACGTAGAGCTTTCTAAATCGTTACTCCGTGAGGAAACCCTTGTGGGATTTGATGGCATTGGGTTGAGGAAAATGGGGAGTGCAAGAAAGAGAATAA
TGAGGAATGATGAGAGAGATGATCAACAAGTTCAAGATAGCTCAAGAATTTCAGGTGCAAACCACTATGATAGCAACTTTGAAGATCAAAAGAAGGATTTTGGAGTGAAT
AGAAAAAATTTGGGTATCAAAAATTGTAAAAATGTTGATGCTAAGAAGCTCAATCTTGCTGGCTTTGTAACATTTGGCAAGAACAAGTCTTTTCAAACATCTCAACCTAA
CCATCAGGAGAGTATCAGCTCGAGGCATTCAAAGAGGGTGTTGAAGAAACATGAAGATACTCAAAGGCTTGTCAAGGCAGCTAGAGAGATAGCCAATTTGATGCACAGAG
ACTATAAGGATTGGGCTCACCGCAAGCCACCGATCAACAATTATGAACCTATGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAAGAAGATCTTGAGCTTAGTTATTTGCTTTCTCTTTCTAATGTCTCCCCTTTCCCACTCTCTCTCTCATGCTCTACAAGATGGCACTGTTGTCGAACCAGT
AATACCTGTTGTAAACGTAGAGCTTTCTAAATCGTTACTCCGTGAGGAAACCCTTGTGGGATTTGATGGCATTGGGTTGAGGAAAATGGGGAGTGCAAGAAAGAGAATAA
TGAGGAATGATGAGAGAGATGATCAACAAGTTCAAGATAGCTCAAGAATTTCAGGTGCAAACCACTATGATAGCAACTTTGAAGATCAAAAGAAGGATTTTGGAGTGAAT
AGAAAAAATTTGGGTATCAAAAATTGTAAAAATGTTGATGCTAAGAAGCTCAATCTTGCTGGCTTTGTAACATTTGGCAAGAACAAGTCTTTTCAAACATCTCAACCTAA
CCATCAGGAGAGTATCAGCTCGAGGCATTCAAAGAGGGTGTTGAAGAAACATGAAGATACTCAAAGGCTTGTCAAGGCAGCTAGAGAGATAGCCAATTTGATGCACAGAG
ACTATAAGGATTGGGCTCACCGCAAGCCACCGATCAACAATTATGAACCTATGCATTAA
Protein sequenceShow/hide protein sequence
MKKKKILSLVICFLFLMSPLSHSLSHALQDGTVVEPVIPVVNVELSKSLLREETLVGFDGIGLRKMGSARKRIMRNDERDDQQVQDSSRISGANHYDSNFEDQKKDFGVN
RKNLGIKNCKNVDAKKLNLAGFVTFGKNKSFQTSQPNHQESISSRHSKRVLKKHEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEPMH