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Carg20443 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20443
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
Genome locationCarg_Chr12:337275..337568
RNA-Seq ExpressionCarg20443
SyntenyCarg20443
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061011.1 uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa]1.0e-3689.25Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQ
        MD IAL+Q+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPI+VQLS SQ
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQ

KAG6585227.1 hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sororia]6.5e-47100Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF
        MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF

XP_004142934.1 uncharacterized protein LOC101220122 [Cucumis sativus]9.4e-3889.47Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN
        MD IALSQ+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTC+CVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLS SQ N
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN

XP_010100228.1 uncharacterized protein LOC21384964 [Morus notabilis]4.1e-3372.34Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN
        M+PI L+Q+ATGLSVL GAV+VKSV++QKPMA P PRC +CNG+GRVTCLC RWSDGD+GCR+C+GSGRM C SCGG G GRPIT Q+S  +PN
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN

XP_022132135.1 uncharacterized protein LOC111005075 [Momordica charantia]7.7e-4083.51Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF
        MDP+ L+Q+ATGLSV+AGAVVVKSV++QKPMA P+P C TCNGSGRVTC+CVRWSDGD GCRSC+GSGRMSCRSCGGGGRGRPITVQLSA QPN RF
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF

TrEMBL top hitse value%identityAlignment
A0A061E5D7 Chaperone protein dnaJ-related5.8e-3371.88Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSR
        M PI L+Q+ATGLSVLAGAV+VKSV++QKPMA P  RCATCNG+GRVTC+C RWSDGDVGCR+C+GSGRM+C SCGG G GRP+ VQ+S   P +R
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSR

A0A0A0LKQ8 Uncharacterized protein4.6e-3889.47Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN
        MD IALSQ+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTC+CVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLS SQ N
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN

A0A5A7V5E2 Uncharacterized protein5.0e-3789.25Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQ
        MD IAL+Q+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPI+VQLS SQ
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQ

A0A6J1BRL0 uncharacterized protein LOC1110050753.7e-4083.51Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF
        MDP+ L+Q+ATGLSV+AGAVVVKSV++QKPMA P+P C TCNGSGRVTC+CVRWSDGD GCRSC+GSGRMSCRSCGGGGRGRPITVQLSA QPN RF
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF

W9RCB8 Uncharacterized protein2.0e-3372.34Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN
        M+PI L+Q+ATGLSVL GAV+VKSV++QKPMA P PRC +CNG+GRVTCLC RWSDGD+GCR+C+GSGRM C SCGG G GRPIT Q+S  +PN
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43260.1 chaperone protein dnaJ-related2.0e-3365.96Show/hide
Query:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN
        M PI ++Q+ATG+SVLAGAV +KSV++QKPMA   PRC TCNG+GRVTC C RWSDGDVGCR CSGSGR +C +CGG G GRP+  Q++   PN
Subjt:  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGATTGCGCTGAGTCAGATTGCCACCGGTCTGAGCGTGTTGGCCGGCGCGGTGGTGGTGAAGTCCGTCATTGAGCAGAAGCCGATGGCCAGGCCTATGCCGAG
GTGCGCCACATGTAATGGGTCGGGTCGGGTTACATGCCTATGTGTCCGGTGGTCCGATGGAGATGTTGGGTGCCGGTCGTGTTCCGGGTCGGGTCGGATGTCGTGTAGAA
GCTGCGGTGGCGGCGGAAGAGGGCGGCCGATCACCGTGCAGTTATCGGCTAGCCAACCCAACAGCCGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCGATTGCGCTGAGTCAGATTGCCACCGGTCTGAGCGTGTTGGCCGGCGCGGTGGTGGTGAAGTCCGTCATTGAGCAGAAGCCGATGGCCAGGCCTATGCCGAG
GTGCGCCACATGTAATGGGTCGGGTCGGGTTACATGCCTATGTGTCCGGTGGTCCGATGGAGATGTTGGGTGCCGGTCGTGTTCCGGGTCGGGTCGGATGTCGTGTAGAA
GCTGCGGTGGCGGCGGAAGAGGGCGGCCGATCACCGTGCAGTTATCGGCTAGCCAACCCAACAGCCGATTTTGA
Protein sequenceShow/hide protein sequence
MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF