; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20447 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20447
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranscription and mRNA export factor ENY2
Genome locationCarg_Chr12:310629..314026
RNA-Seq ExpressionCarg20447
SyntenyCarg20447
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0015031 - protein transport (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR018783 - Transcription factor, enhancer of yellow 2
IPR038212 - Transcription factor EnY2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585223.1 Transcription and mRNA export factor ENY2, partial [Cucurbita argyrosperma subsp. sororia]5.4e-5297.37Show/hide
Query:  SLESRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAE
        S + RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAE
Subjt:  SLESRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAE

Query:  LLQRIRTFLASTAI
        LLQRIRTFLASTAI
Subjt:  LLQRIRTFLASTAI

KAG7020143.1 Transcription and mRNA export factor SUS1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-65100Show/hide
Query:  MFHKINRLAGPRRLQSAGESLESRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDL
        MFHKINRLAGPRRLQSAGESLESRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDL
Subjt:  MFHKINRLAGPRRLQSAGESLESRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDL

Query:  VQVITPKGRASVPDSVKAELLQRIRTFLASTAI
        VQVITPKGRASVPDSVKAELLQRIRTFLASTAI
Subjt:  VQVITPKGRASVPDSVKAELLQRIRTFLASTAI

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]2.0e-5199.09Show/hide
Query:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRTFLASTAI
        IR+FLASTAI
Subjt:  IRTFLASTAI

XP_023002845.1 transcription and mRNA export factor ENY2 [Cucurbita maxima]7.0e-52100Show/hide
Query:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRTFLASTAI
        IRTFLASTAI
Subjt:  IRTFLASTAI

XP_023537213.1 transcription and mRNA export factor ENY2 [Cucurbita pepo subsp. pepo]4.6e-5198.18Show/hide
Query:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKD+MKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRTFLASTAI
        I+TFLASTAI
Subjt:  IRTFLASTAI

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY21.2e-4995.45Show/hide
Query:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRTFLASTAI
        IR+FL STAI
Subjt:  IRTFLASTAI

A0A1S3BDR5 Transcription and mRNA export factor ENY24.2e-5096.36Show/hide
Query:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRTFLASTAI
        IR+FLASTAI
Subjt:  IRTFLASTAI

A0A6J1BSW0 Transcription and mRNA export factor ENY23.0e-4894.55Show/hide
Query:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPE EDDR+QQ TFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRTFLASTAI
        IR+FL STAI
Subjt:  IRTFLASTAI

A0A6J1GGQ4 Transcription and mRNA export factor ENY29.9e-5299.09Show/hide
Query:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRTFLASTAI
        IR+FLASTAI
Subjt:  IRTFLASTAI

A0A6J1KQ41 Transcription and mRNA export factor ENY23.4e-52100Show/hide
Query:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRTFLASTAI
        IRTFLASTAI
Subjt:  IRTFLASTAI

SwissProt top hitse value%identityAlignment
B5FZ63 Transcription and mRNA export factor ENY26.2e-2771.76Show/hide
Query:  TINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTA
        TIN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIRTFLA  A
Subjt:  TINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTA

Q3ZBJ0 Transcription and mRNA export factor ENY21.8e-2671.43Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIRTFLA  A
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTA

Q6NQ54 Transcription and mRNA export factor ENY25.8e-3361.61Show/hide
Query:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL
        S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL
Subjt:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL

Query:  QRIRTFLASTAI
         RI+ F+ S A+
Subjt:  QRIRTFLASTAI

Q9JIX0 Transcription and mRNA export factor ENY21.8e-2671.43Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIRTFLA  A
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTA

Q9NPA8 Transcription and mRNA export factor ENY21.8e-2671.43Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIRTFLA  A
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTA

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).4.1e-3461.61Show/hide
Query:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL
        S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL
Subjt:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL

Query:  QRIRTFLASTAI
         RI+ F+ S A+
Subjt:  QRIRTFLASTAI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4.6e-2557.14Show/hide
Query:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
        S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  +
Subjt:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCATAAGATTAATAGACTCGCCGGTCCTCGTCGTCTCCAGTCAGCTGGCGAGTCGCTTGAGTCGAGGACTTCCATTAATCGGCCTCCAACGCCCGAACCGGAGGA
TGATCGAGAACAGCAGCCTACTTTTCAAGAAACAATCAATATCAAGCTGATTGAAAGTGGCGAAAAGGAGCGGTTAAAAGAGCTTTTGAGAGAAAGGCTCATCGAATGTG
GCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCGTATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCTAAAGGCAGAGCT
TCAGTTCCAGATTCAGTGAAAGCCGAACTGCTGCAGCGCATCCGAACTTTCCTTGCATCAACAGCCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCATAAGATTAATAGACTCGCCGGTCCTCGTCGTCTCCAGTCAGCTGGCGAGTCGCTTGAGTCGAGGACTTCCATTAATCGGCCTCCAACGCCCGAACCGGAGGA
TGATCGAGAACAGCAGCCTACTTTTCAAGAAACAATCAATATCAAGCTGATTGAAAGTGGCGAAAAGGAGCGGTTAAAAGAGCTTTTGAGAGAAAGGCTCATCGAATGTG
GCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCGTATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCTAAAGGCAGAGCT
TCAGTTCCAGATTCAGTGAAAGCCGAACTGCTGCAGCGCATCCGAACTTTCCTTGCATCAACAGCCATCTGACATACACAAGAACATTGCAAGCCGCTAAAAAAGTATCT
CCTTCATCCCCTTACCCTTACTAAACCAGCTAAACCACTTATTCTACACTATATATGGAATTGGTTTGGACTTTTTCTTATCAAATTAGATTGCTTCTGCTGGGAGAATC
CAAGTCAAGTTCCATTTTCGGGTTGCCGAGGATGATGATGCATTGTATAAACTTCATACGCTGTCAACAAAATCCTGATTGGTGAGTGTTTTGTTGTATAATGCAAGTAA
AAAGGTAGCTGTTTGAGTTTTATTTAGTACACAGGACACTGAAACACGTGATGATAACTCTGTTTTACCGAATAGTTGGTCTGTTGTAACTCTTGATTTGGCTACTTCGA
TGGTGTACTATGTCTTTCGATTTGTTCAATTGCTCGCAGCTGCAACTGTCAACTTCTCTTATCAACTTCTTTGCTTTTGTTTCTTGTGCTTTCATTTACGAAACTGGTGA
TCCATGTTTTCTAATTAATTTTAGTCTATATATACACGCATATGTATACC
Protein sequenceShow/hide protein sequence
MFHKINRLAGPRRLQSAGESLESRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRA
SVPDSVKAELLQRIRTFLASTAI