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Carg20470 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20470
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:219607..220429
RNA-Seq ExpressionCarg20470
SyntenyCarg20470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585202.1 hypothetical protein SDJN03_17935, partial [Cucurbita argyrosperma subsp. sororia]2.4e-8199.35Show/hide
Query:  STGSPTQAKVPQDDERRIYENQIKMLRCVLSSSLEGCRSNFDKQRKAPENVQGQEEIPSTASFIHEDTKTITETPNFPHTMQIPETQDIGPISACVPFSD
        STGSPTQAKVPQDDERRIYENQIKMLRCVLSSSLEGC+SNFDKQRKAPENVQGQEEIPSTASFIHEDTKTITETPNFPHTMQIPETQDIGPISACVPFSD
Subjt:  STGSPTQAKVPQDDERRIYENQIKMLRCVLSSSLEGCRSNFDKQRKAPENVQGQEEIPSTASFIHEDTKTITETPNFPHTMQIPETQDIGPISACVPFSD

Query:  SLSAELSQGRVHPWRIETPFIINGTIKILDPHRGLHPSLINSIYTSNSDSKKS
        SLSAELSQGRVHPWRIETPFIINGTIKILDPHRGLHPSLINSIYTSNSDSKKS
Subjt:  SLSAELSQGRVHPWRIETPFIINGTIKILDPHRGLHPSLINSIYTSNSDSKKS
KAG7020120.1 hypothetical protein SDJN02_16802, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-91100Show/hide
Query:  MYCSFCLGIPFPNISTGSPTQAKVPQDDERRIYENQIKMLRCVLSSSLEGCRSNFDKQRKAPENVQGQEEIPSTASFIHEDTKTITETPNFPHTMQIPET
        MYCSFCLGIPFPNISTGSPTQAKVPQDDERRIYENQIKMLRCVLSSSLEGCRSNFDKQRKAPENVQGQEEIPSTASFIHEDTKTITETPNFPHTMQIPET
Subjt:  MYCSFCLGIPFPNISTGSPTQAKVPQDDERRIYENQIKMLRCVLSSSLEGCRSNFDKQRKAPENVQGQEEIPSTASFIHEDTKTITETPNFPHTMQIPET

Query:  QDIGPISACVPFSDSLSAELSQGRVHPWRIETPFIINGTIKILDPHRGLHPSLINSIYTSNSDSKKS
        QDIGPISACVPFSDSLSAELSQGRVHPWRIETPFIINGTIKILDPHRGLHPSLINSIYTSNSDSKKS
Subjt:  QDIGPISACVPFSDSLSAELSQGRVHPWRIETPFIINGTIKILDPHRGLHPSLINSIYTSNSDSKKS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGTTCCTTCTGTCTTGGAATTCCATTTCCCAACATATCCACAGGTAGTCCAACACAAGCAAAAGTACCGCAGGATGACGAAAGGAGGATATACGAGAATCAAAT
CAAAATGTTGAGATGTGTTCTATCGAGCAGTTTGGAAGGGTGCCGAAGCAACTTCGATAAACAGCGTAAAGCACCTGAGAATGTACAAGGCCAAGAAGAAATTCCATCCA
CGGCCAGCTTTATTCATGAAGATACCAAGACTATAACAGAGACGCCAAACTTCCCACATACCATGCAGATACCAGAAACTCAGGATATTGGACCGATATCAGCTTGTGTT
CCGTTTTCTGATAGCCTCAGTGCTGAGCTTAGTCAGGGCAGAGTACATCCTTGGAGAATAGAGACACCATTCATTATTAATGGTACGATTAAGATCCTAGATCCACACAG
AGGTCTTCATCCAAGCTTGATCAACAGTATATACACATCAAACAGCGATAGTAAAAAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTGTTCCTTCTGTCTTGGAATTCCATTTCCCAACATATCCACAGGTAGTCCAACACAAGCAAAAGTACCGCAGGATGACGAAAGGAGGATATACGAGAATCAAAT
CAAAATGTTGAGATGTGTTCTATCGAGCAGTTTGGAAGGGTGCCGAAGCAACTTCGATAAACAGCGTAAAGCACCTGAGAATGTACAAGGCCAAGAAGAAATTCCATCCA
CGGCCAGCTTTATTCATGAAGATACCAAGACTATAACAGAGACGCCAAACTTCCCACATACCATGCAGATACCAGAAACTCAGGATATTGGACCGATATCAGCTTGTGTT
CCGTTTTCTGATAGCCTCAGTGCTGAGCTTAGTCAGGGCAGAGTACATCCTTGGAGAATAGAGACACCATTCATTATTAATGGTACGATTAAGATCCTAGATCCACACAG
AGGTCTTCATCCAAGCTTGATCAACAGTATATACACATCAAACAGCGATAGTAAAAAGTCTTAG
Protein sequenceShow/hide protein sequence
MYCSFCLGIPFPNISTGSPTQAKVPQDDERRIYENQIKMLRCVLSSSLEGCRSNFDKQRKAPENVQGQEEIPSTASFIHEDTKTITETPNFPHTMQIPETQDIGPISACV
PFSDSLSAELSQGRVHPWRIETPFIINGTIKILDPHRGLHPSLINSIYTSNSDSKKS