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Carg20493 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20493
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNucleotid_trans domain-containing protein
Genome locationCarg_Chr12:140050..140694
RNA-Seq ExpressionCarg20493
SyntenyCarg20493
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061061.1 putative Nucleotide-diphospho-sugar transferase family protein [Cucumis melo var. makuwa]2.9e-4748.02Show/hide
Query:  MLKSCLPYLGSPDCVD---NNDTKSKELE-----------GQDKMNSP-SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFR
        ML+SCLPYLGSPDCV+   N+++KS+ELE             ++ NSP S   ++  K I VRVVHAGGKV+HYPNAV+AA++L+ LP GKWL  P+VF+
Subjt:  MLKSCLPYLGSPDCVD---NNDTKSKELE-----------GQDKMNSP-SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFR

Query:  QPHESIIRAEEYLVPGHKYYVVPLSTIKKLKRKH--------------NKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTP
        QPH+SII  +EYL+PGHKYYV+PLSTI KL +KH              N   G  Q+  ++D  A ++   +     +  D SF SA + Y  K K+ + 
Subjt:  QPHESIIRAEEYLVPGHKYYVVPLSTIKKLKRKH--------------NKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTP

Query:  TS-NGHARGSSRRGGRMSVPHA--------KPKPCSGYTWEPGLTSIQELSP
        ++ NG  RGS  R  R  VP A        KPKPCS   WEPGLTSIQELSP
Subjt:  TS-NGHARGSSRRGGRMSVPHA--------KPKPCSGYTWEPGLTSIQELSP

KAG6585177.1 hypothetical protein SDJN03_17910, partial [Cucurbita argyrosperma subsp. sororia]2.6e-11799.07Show/hide
Query:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP
        MLKSCLPYLGSPDC+DNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP
Subjt:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP

Query:  GHKYYVVPLSTIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKPCSGY
        GHKYYVVPLSTIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSA DLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKPCSGY
Subjt:  GHKYYVVPLSTIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKPCSGY

Query:  TWEPGLTSIQELSP
        TWEPGLTSIQELSP
Subjt:  TWEPGLTSIQELSP

KAG7020097.1 hypothetical protein SDJN02_16779, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-118100Show/hide
Query:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP
        MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP
Subjt:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP

Query:  GHKYYVVPLSTIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKPCSGY
        GHKYYVVPLSTIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKPCSGY
Subjt:  GHKYYVVPLSTIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKPCSGY

Query:  TWEPGLTSIQELSP
        TWEPGLTSIQELSP
Subjt:  TWEPGLTSIQELSP

KGN62322.1 hypothetical protein Csa_018692 [Cucumis sativus]2.9e-4748.22Show/hide
Query:  MLKSCLPYLGSPDCVD--NNDTKSKELE-----------GQDKMNSP-SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQ
        ML+SCLPYLGSP CV+  N+++KS+ELE                NSP S   ++  K I VRVVHAGGKV+HYPNAV+A+++L+ LP GKWL  P+VF+Q
Subjt:  MLKSCLPYLGSPDCVD--NNDTKSKELE-----------GQDKMNSP-SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQ

Query:  PHESIIRAEEYLVPGHKYYVVPLSTIKKLKRKH-----------------NKMSGGTQEEMSSDVSAVVEARDYESRESECMDD-SFSSAGDLYVRKAKK
        PH+SII  +E+L+PGHKYYV+PLSTI KL RKH                 N  +G  Q+  ++D  A ++ RD  + ES   +D SF SA + Y  K K+
Subjt:  PHESIIRAEEYLVPGHKYYVVPLSTIKKLKRKH-----------------NKMSGGTQEEMSSDVSAVVEARDYESRESECMDD-SFSSAGDLYVRKAKK

Query:  WTPTS-NGHARGSSRRGGRMSV------PHAKPKPCSGYTWEPGLTSIQELSP
           ++ NG  RGS  R  R+ V      P  KPKP S Y WEPGLTSIQELSP
Subjt:  WTPTS-NGHARGSSRRGGRMSV------PHAKPKPCSGYTWEPGLTSIQELSP

XP_021293479.1 uncharacterized protein LOC110423566 [Herrania umbratica]2.1e-2942.41Show/hide
Query:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP
        MLKSC P+LG      N+D+ SK+  G   M   S++ +L+ + I VR+VHAGG+ E Y NAV  + V+EK P G  +ARPEVF  PHES++  E+ L+P
Subjt:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP

Query:  GHKYYVVPLSTIKKLKRKHN---KMSGGTQ--EEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPT-SNGHARGSSRRGGRMSVPHAKP
        G KYY++P +T +KLKRKH    K+ G  +  EEMS       +AR       E +++S  SA + YV K  K +        R S R GGR+  P   P
Subjt:  GHKYYVVPLSTIKKLKRKHN---KMSGGTQ--EEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPT-SNGHARGSSRRGGRMSVPHAKP

Query:  KPCSGYT----WEPGLTSIQELSP
         P +       WEP LTS+QELSP
Subjt:  KPCSGYT----WEPGLTSIQELSP

TrEMBL top hitse value%identityAlignment
A0A0A0LND2 Uncharacterized protein1.4e-4748.22Show/hide
Query:  MLKSCLPYLGSPDCVD--NNDTKSKELE-----------GQDKMNSP-SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQ
        ML+SCLPYLGSP CV+  N+++KS+ELE                NSP S   ++  K I VRVVHAGGKV+HYPNAV+A+++L+ LP GKWL  P+VF+Q
Subjt:  MLKSCLPYLGSPDCVD--NNDTKSKELE-----------GQDKMNSP-SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQ

Query:  PHESIIRAEEYLVPGHKYYVVPLSTIKKLKRKH-----------------NKMSGGTQEEMSSDVSAVVEARDYESRESECMDD-SFSSAGDLYVRKAKK
        PH+SII  +E+L+PGHKYYV+PLSTI KL RKH                 N  +G  Q+  ++D  A ++ RD  + ES   +D SF SA + Y  K K+
Subjt:  PHESIIRAEEYLVPGHKYYVVPLSTIKKLKRKH-----------------NKMSGGTQEEMSSDVSAVVEARDYESRESECMDD-SFSSAGDLYVRKAKK

Query:  WTPTS-NGHARGSSRRGGRMSV------PHAKPKPCSGYTWEPGLTSIQELSP
           ++ NG  RGS  R  R+ V      P  KPKP S Y WEPGLTSIQELSP
Subjt:  WTPTS-NGHARGSSRRGGRMSV------PHAKPKPCSGYTWEPGLTSIQELSP

A0A2P6R146 Putative fucosylgalactoside 3-alpha-galactosyltransferase7.2e-2840.2Show/hide
Query:  NDTKSKELEGQDKMNSP---SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVPGHKYYVVPLSTIKK
        +++K  +L G+D   +P   SL+ + + K ILVR+VHAGG+ E +PNA+ A+ +++K P GK +ARPEVF++P ES++R +E L+PG KYY++P +T +K
Subjt:  NDTKSKELEGQDKMNSP---SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVPGHKYYVVPLSTIKK

Query:  LKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKP----CSGYTWEPGLTSIQ
        LKR+  K      +E + D   +++ +     E E  DDS  SA D +V K K+         + S RRG R   P   P P      G+ WEP LTS+Q
Subjt:  LKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKP----CSGYTWEPGLTSIQ

Query:  ELSP
        E+SP
Subjt:  ELSP

A0A5A7V5J3 Putative Nucleotide-diphospho-sugar transferase family protein1.4e-4748.02Show/hide
Query:  MLKSCLPYLGSPDCVD---NNDTKSKELE-----------GQDKMNSP-SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFR
        ML+SCLPYLGSPDCV+   N+++KS+ELE             ++ NSP S   ++  K I VRVVHAGGKV+HYPNAV+AA++L+ LP GKWL  P+VF+
Subjt:  MLKSCLPYLGSPDCVD---NNDTKSKELE-----------GQDKMNSP-SLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFR

Query:  QPHESIIRAEEYLVPGHKYYVVPLSTIKKLKRKH--------------NKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTP
        QPH+SII  +EYL+PGHKYYV+PLSTI KL +KH              N   G  Q+  ++D  A ++   +     +  D SF SA + Y  K K+ + 
Subjt:  QPHESIIRAEEYLVPGHKYYVVPLSTIKKLKRKH--------------NKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTP

Query:  TS-NGHARGSSRRGGRMSVPHA--------KPKPCSGYTWEPGLTSIQELSP
        ++ NG  RGS  R  R  VP A        KPKPCS   WEPGLTSIQELSP
Subjt:  TS-NGHARGSSRRGGRMSVPHA--------KPKPCSGYTWEPGLTSIQELSP

A0A5B7AGD0 Uncharacterized protein3.2e-2838.14Show/hide
Query:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP
        ML+ C   LG    +     + KEL       + SL+ ++ LK I VR++HAGG+ E Y NA+ A+ +LEK P G  +ARPEVF+ PHES++ AE+ L+P
Subjt:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP

Query:  GHKYYVVPLSTIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPH-AKPKPCSG
        GHKYY++P +T+KKLKRKH K      +E +    A+++ +       +  ++S  SA D Y  + ++W+           R+  +  VP   KP    G
Subjt:  GHKYYVVPLSTIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPH-AKPKPCSG

Query:  YTWEPGLTSIQELSP
          WEP L SIQE+SP
Subjt:  YTWEPGLTSIQELSP

A0A6J1B4B5 uncharacterized protein LOC1104235661.0e-2942.41Show/hide
Query:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP
        MLKSC P+LG      N+D+ SK+  G   M   S++ +L+ + I VR+VHAGG+ E Y NAV  + V+EK P G  +ARPEVF  PHES++  E+ L+P
Subjt:  MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVP

Query:  GHKYYVVPLSTIKKLKRKHN---KMSGGTQ--EEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPT-SNGHARGSSRRGGRMSVPHAKP
        G KYY++P +T +KLKRKH    K+ G  +  EEMS       +AR       E +++S  SA + YV K  K +        R S R GGR+  P   P
Subjt:  GHKYYVVPLSTIKKLKRKHN---KMSGGTQ--EEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPT-SNGHARGSSRRGGRMSVPHAKP

Query:  KPCSGYT----WEPGLTSIQELSP
         P +       WEP LTS+QELSP
Subjt:  KPCSGYT----WEPGLTSIQELSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAGAGTTGTCTTCCATATTTGGGGTCACCCGATTGTGTGGACAATAATGACACAAAAAGCAAAGAATTGGAAGGGCAAGACAAAATGAATAGCCCTTCACTGGA
GTGTACGTTAGAGTTGAAGCAGATTTTGGTGAGAGTGGTCCATGCGGGAGGCAAAGTGGAGCATTATCCCAATGCAGTTATCGCCGCTAGGGTGCTGGAAAAGCTGCCGG
CGGGGAAGTGGCTGGCACGCCCTGAAGTTTTCAGGCAGCCACACGAGTCCATCATAAGGGCGGAAGAATATCTAGTGCCAGGCCACAAATATTATGTAGTTCCTTTGTCG
ACCATAAAAAAACTGAAGAGAAAGCACAACAAGATGAGCGGAGGGACGCAAGAAGAGATGAGTTCCGATGTGTCGGCTGTGGTGGAAGCCAGAGATTACGAGAGTAGAGA
ATCAGAATGCATGGATGACTCGTTTTCTTCTGCAGGAGATTTGTACGTAAGGAAGGCGAAGAAGTGGACACCCACATCAAATGGGCACGCACGTGGATCAAGCAGAAGGG
GTGGGCGGATGTCGGTACCACACGCCAAGCCAAAACCCTGCTCTGGATACACATGGGAGCCTGGCCTTACTTCCATACAAGAGCTCTCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAGAGTTGTCTTCCATATTTGGGGTCACCCGATTGTGTGGACAATAATGACACAAAAAGCAAAGAATTGGAAGGGCAAGACAAAATGAATAGCCCTTCACTGGA
GTGTACGTTAGAGTTGAAGCAGATTTTGGTGAGAGTGGTCCATGCGGGAGGCAAAGTGGAGCATTATCCCAATGCAGTTATCGCCGCTAGGGTGCTGGAAAAGCTGCCGG
CGGGGAAGTGGCTGGCACGCCCTGAAGTTTTCAGGCAGCCACACGAGTCCATCATAAGGGCGGAAGAATATCTAGTGCCAGGCCACAAATATTATGTAGTTCCTTTGTCG
ACCATAAAAAAACTGAAGAGAAAGCACAACAAGATGAGCGGAGGGACGCAAGAAGAGATGAGTTCCGATGTGTCGGCTGTGGTGGAAGCCAGAGATTACGAGAGTAGAGA
ATCAGAATGCATGGATGACTCGTTTTCTTCTGCAGGAGATTTGTACGTAAGGAAGGCGAAGAAGTGGACACCCACATCAAATGGGCACGCACGTGGATCAAGCAGAAGGG
GTGGGCGGATGTCGGTACCACACGCCAAGCCAAAACCCTGCTCTGGATACACATGGGAGCCTGGCCTTACTTCCATACAAGAGCTCTCTCCCTGA
Protein sequenceShow/hide protein sequence
MLKSCLPYLGSPDCVDNNDTKSKELEGQDKMNSPSLECTLELKQILVRVVHAGGKVEHYPNAVIAARVLEKLPAGKWLARPEVFRQPHESIIRAEEYLVPGHKYYVVPLS
TIKKLKRKHNKMSGGTQEEMSSDVSAVVEARDYESRESECMDDSFSSAGDLYVRKAKKWTPTSNGHARGSSRRGGRMSVPHAKPKPCSGYTWEPGLTSIQELSP