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Carg20504 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20504
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPlant protein 1589 of unknown function
Genome locationCarg_Chr12:96517..97019
RNA-Seq ExpressionCarg20504
SyntenyCarg20504
Gene Ontology termsNA
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585166.1 hypothetical protein SDJN03_17899, partial [Cucurbita argyrosperma subsp. sororia]4.1e-19100Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
        MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
KAG7020086.1 hypothetical protein SDJN02_16768, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-45100Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRDLKFAPIYSQIQEECSYNNEEKTTSVEMRDNMQSVIW
        MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRDLKFAPIYSQIQEECSYNNEEKTTSVEMRDNMQSVIW
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRDLKFAPIYSQIQEECSYNNEEKTTSVEMRDNMQSVIW
XP_022951733.1 uncharacterized protein LOC111454474 [Cucurbita moschata]1.6e-1895.92Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
        MSRDECVKAL RHANIRPLITLTVWKELQKENTEFFRAYLRT+PPKPFL
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
XP_023538194.1 uncharacterized protein LOC111799040 isoform X1 [Cucurbita pepo subsp. pepo]4.1e-1992.45Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPIL
        MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRT+PPKPFL   L
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPIL
XP_023538195.1 uncharacterized protein LOC111799040 isoform X2 [Cucurbita pepo subsp. pepo]5.4e-1997.96Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
        MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRT+PPKPFL
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
TrEMBL top hitse value%identityAlignment
A0A0A0LMP2 Uncharacterized protein3.9e-1583.67Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
        MSRDECVKALA HANIRPLITLTVWKELQKEN++FFRAY  T+ P PFL
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
A0A1S3BA39 uncharacterized protein LOC1034877012.3e-1583.67Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
        MSRDECVKALA HANIRPLITLTVWKELQKEN++FFRAY  T+ P PFL
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
A0A6J1GIJ5 uncharacterized protein LOC1114544747.6e-1995.92Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
        MSRDECVKAL RHANIRPLITLTVWKELQKENTEFFRAYLRT+PPKPFL
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFL
A0A6J1HCE7 uncharacterized protein LOC111462356 isoform X21.5e-1475Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRDL
        MSRDECVKALA HANIRPLIT TVWKELQKEN EFFRAY RT+   PFL    R +
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRDL
A0A6J1KKF7 uncharacterized protein LOC1114965351.7e-1885.71Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRDL
        MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRT+P KPFL    R +
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.2 Plant protein 1589 of unknown function3.6e-1359.26Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILR
        M+RDECVKAL  HA+I PL+TLTVW+ LQ+EN +FF  Y   V P+PFL   +R
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILR
AT1G10657.3 Plant protein 1589 of unknown function2.8e-1360Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRD
        M+RDECVKAL  HA+I PL+TLTVW+ LQ+EN +FF  Y   V P+PFL   L D
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRD
AT1G10657.4 Plant protein 1589 of unknown function2.4e-0969.44Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFF
        M+RDECVKAL  HA+I PL+TLTVW+ LQ+EN +FF
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFF
AT3G55240.1 Plant protein 1589 of unknown function6.8e-1271.79Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAY
        MS++ECV+AL++HANI P+IT TVWKEL+KEN EFF+AY
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAY
AT5G02580.1 Plant protein 1589 of unknown function1.3e-1065.85Show/hide
Query:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLR
        M ++EC+ AL +HANI+P+IT TVWKEL KEN EFF AY R
Subjt:  MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGAGATGAGTGCGTCAAGGCCCTGGCTCGCCATGCAAACATTCGCCCTCTCATAACACTCACAGTGTGGAAAGAGCTTCAGAAAGAGAACACTGAATTTTTCCG
TGCATATTTGCGTACTGTTCCTCCCAAGCCATTCCTGGACCCAATTTTACGTGATCTTAAATTTGCACCTATTTACAGCCAAATTCAGGAGGAGTGCTCCTACAATAACG
AGGAGAAGACAACGTCAGTGGAGATGAGGGATAATATGCAGTCTGTAATATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCGAGATGAGTGCGTCAAGGCCCTGGCTCGCCATGCAAACATTCGCCCTCTCATAACACTCACAGTGTGGAAAGAGCTTCAGAAAGAGAACACTGAATTTTTCCG
TGCATATTTGCGTACTGTTCCTCCCAAGCCATTCCTGGACCCAATTTTACGTGATCTTAAATTTGCACCTATTTACAGCCAAATTCAGGAGGAGTGCTCCTACAATAACG
AGGAGAAGACAACGTCAGTGGAGATGAGGGATAATATGCAGTCTGTAATATGGTGA
Protein sequenceShow/hide protein sequence
MSRDECVKALARHANIRPLITLTVWKELQKENTEFFRAYLRTVPPKPFLDPILRDLKFAPIYSQIQEECSYNNEEKTTSVEMRDNMQSVIW