; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20514 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20514
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNucleic acid-binding, OB-fold-like protein
Genome locationCarg_Chr12:37105..42074
RNA-Seq ExpressionCarg20514
SyntenyCarg20514
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142984.1 uncharacterized protein At4g28440 [Cucumis sativus]7.2e-6897.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

XP_022131585.1 uncharacterized protein At4g28440-like [Momordica charantia]4.2e-6897.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

XP_022951207.1 uncharacterized protein At4g28440-like [Cucurbita moschata]3.8e-69100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

XP_022961781.1 uncharacterized protein At4g28440-like [Cucurbita moschata]1.4e-6696.35Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTL VKVVN KMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

XP_038883981.1 uncharacterized protein At4g28440 [Benincasa hispida]9.4e-6897.08Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTK+DQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

TrEMBL top hitse value%identityAlignment
A0A1S3BA24 uncharacterized protein At4g28440 isoform X13.5e-6897.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

A0A5A7V0K6 Nucleic acid-binding protein3.5e-6897.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

A0A6J1BQ40 uncharacterized protein At4g28440-like2.1e-6897.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

A0A6J1GH14 uncharacterized protein At4g28440-like1.9e-69100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

A0A6J1KS21 uncharacterized protein At4g28440-like1.9e-69100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
        AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284402.0e-4467.42Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAV
        RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDETG I+FTARNDQVDLMK GAT+ILRN++IDMFKG+MRL V
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAV

Query:  DRWGRVEVTEPASFTVKEENNLSLIEYELVNV
        D+WGR+E T  ASFTVKE+NNLSL+EYEL+NV
Subjt:  DRWGRVEVTEPASFTVKEENNLSLIEYELVNV

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein1.5e-5578.1Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ + LRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPASFTVKEENNLSLIEYELVNV
        RLAVDRWGRVEV  EP   TVK++NNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEENNLSLIEYELVNV

AT1G10590.2 Nucleic acid-binding, OB-fold-like protein1.5e-5578.1Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ + LRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPASFTVKEENNLSLIEYELVNV
        RLAVDRWGRVEV  EP   TVK++NNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEENNLSLIEYELVNV

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein1.5e-5578.1Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ + LRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPASFTVKEENNLSLIEYELVNV
        RLAVDRWGRVEV  EP   TVK++NNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPASFTVKEENNLSLIEYELVNV

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein9.1e-6181.75Show/hide
Query:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMR
        MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQARQ+RI+EC+VGDETG+I+FTARNDQVDLMKEG+T+ LRNAKIDM+KGSMR
Subjt:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMR

Query:  LAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVE
        LAVD+WGRVEVTEPASF VKE+ N+SLIEYELVNVVE
Subjt:  LAVDRWGRVEVTEPASFTVKEENNLSLIEYELVNVVE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein2.8e-4974.62Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAVDRWGR
        +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G       R  RI+ECLVGDET  I+FTARNDQV+LMK GAT+ LRNAKIDMFKGSMRLAVD+WGR
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAVDRWGR

Query:  VEVTEPASFTVKEENNLSLIEYELVNVVEE
        +E TEPA  TVKE+NNLSL+EYELVNVVEE
Subjt:  VEVTEPASFTVKEENNLSLIEYELVNVVEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATCCAAACCTGGACTGAGGAAACCAGTATTTACCAAGGTTGATCAACTTCGGCCAGGCACTAGTGGGCATACTCTTACTGTTAAGGTTGTGAATACAAAGAT
GGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTGGTAGGTGATGAAACTGGAATGATCATATTTACCGCCAGAAATGATC
AAGTCGACTTGATGAAAGAAGGTGCCACTATAATCCTGCGCAATGCTAAGATAGACATGTTCAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGTGTTGAAGTT
ACTGAGCCTGCAAGTTTTACTGTTAAGGAAGAGAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTGGTGGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
TTTGACGGCTACGTTTCTCAAATCAGATCGGCTTCCTTTCTCTGCCTTCGTCTTTGCCTCTGCCACTCGTAAAAGGTATTCGGGGAAATGGCAGAATCCAAACCTGGACT
GAGGAAACCAGTATTTACCAAGGTTGATCAACTTCGGCCAGGCACTAGTGGGCATACTCTTACTGTTAAGGTTGTGAATACAAAGATGGTATTGCAGAAGGGTCGTCCTG
ATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCTTGGTAGGTGATGAAACTGGAATGATCATATTTACCGCCAGAAATGATCAAGTCGACTTGATGAAAGAAGGT
GCCACTATAATCCTGCGCAATGCTAAGATAGACATGTTCAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGTGTTGAAGTTACTGAGCCTGCAAGTTTTACTGT
TAAGGAAGAGAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTGGTGGAAGAGTGAATTTTGTGATCGCGTTCACTTTCCTGCTGCAACCTGACCATAAAATAAA
ACAATCAAGCTACAAAATTACAAGTTTCCTTTGGGGTACTGAAAATGCTCACCGAGTTCATTATTAGGAAATAGAATTCTGGAAGCCAGTTGTACGAAAGTTGATTTTCA
TCCACGCAGCTTATTGTTAGAACCGTTGTTGGGATTTACAAACAGGTGGGTAATGGCTGCAGTTGATGGAAGAAGGCTTAGCCGGCTTTTTTTACTTTTCATTTGGCAAG
TATTTTATTGGCTGTGACACAGTTTTATGATGTTGAAATTATCATAAGATGATGACAAGAGTAGCGCCTTGCGTGGTTTTAAATTATGTTTTTTTTATTAGTCAAGGTTC
ATGCCAACTGAACTGCTTTTGAACTCAAATCCAATGCTTGAATGATTGATTGATTACCCTTCATGTGTGAGGATTTCACGAGTAAATATCAGTCTCCGGTTTTAGGTTGC
CTTTGTTTGTGTATGTGTTGTATGATGTGCTTCAGCAGGTCTTATGTTGTGTGATAAGATCTTAGGATCAAGTTGGTATCCTAAATTGTACATTTCACACAGAAAAGAGA
GGGGTAATAAGGAAAGC
Protein sequenceShow/hide protein sequence
MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAVDRWGRVEV
TEPASFTVKEENNLSLIEYELVNVVEE