; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20520 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20520
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpentatricopeptide repeat-containing protein At4g21065-like
Genome locationCarg_Chr12:949434..950294
RNA-Seq ExpressionCarg20520
SyntenyCarg20520
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585316.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]4.3e-163100Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

KAG7020234.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-163100Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

XP_022951266.1 putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita moschata]6.4e-15996.85Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNE+IWSM+IAGCRSHGNSELGFY+
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AEQLLKLRPKD ETYVSLLNMY+SAGRWKDVSKVRKLM EEKLGKLKDWSWI+IKEKVYSFKPNDKSHHQT EMYELLETLLDEVKPLGYEP QYTEAIE
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

XP_023001917.1 putative pentatricopeptide repeat-containing protein At5g52630 [Cucurbita maxima]6.2e-15494.76Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGVEPNKITFVGVLSACSHGG VDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFE NEVIWSMIIAGCRSHGNSELGFYA
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        A+QLLKLRPKDTETYVSLLNMY+SAGRWKDVSKVRKLM EEKLGKLKDWSWITIKEKVYSFKP DKSH+QTAEMYELLETLLDEVKPLGYEP QY E  E
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EE GEET FSSTIYHSEKLAVAF LLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRD+KQLHKFSNGYCSCRGFGDLL
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

XP_023538360.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo]5.8e-15293.71Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLG VEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGN ELGFYA
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AEQLLKLRPKDTETYVSLLNMY+SAGRWKDVSKVRKLM EEKLGKLKDWSWI+IKEKVYSFKPNDKSH+QTAEMY+LLETLLDEVKPLGYEP QY E  E
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EE GEET  SS+IYHSEKLAVAF LLNLPTAT IRVVKSITMCRDCHNFIRFISLLTGREIVIRD+KQLHKFSNGYCSCRGFGDLL
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

TrEMBL top hitse value%identityAlignment
A0A0A0LRW6 DYW_deaminase domain-containing protein2.2e-13682.52Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRL G++PN++TFVGVLSACSH GL DEALYYFE+MQKQY I+PVMDHFAC+IDMY+RLGRVEEAFDVV KMNFEPNE IWSM+IAGCRSHG S+LGFYA
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AEQLLKL+PKD ETYVSLLNM++SAGRWKDVSKVRKLMKEEK+GKLKDWSWI+IKEKVYSFKPNDKSH Q+ EMY+LLET+L+EVK LGYEP +  E IE
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        +E  EE V SST+ HSEKLA+AF LLNLPTATPIRVVKSITMCRDCHNFIRFISLL GREIVIRD KQLHKF NGYCSC G+GD L
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

A0A6J1BQL4 putative pentatricopeptide repeat-containing protein At5g526301.7e-14187.41Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGV PN++TFVGVLSACSH GLVDEALYYFEVM KQY I+PVMDHFAC++DMY+RLGRVEEAFDVVKKM+FEPNE+IWSM+IAGCRSHGNSELGFYA
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AEQLLKLRPKDTE YVSLLNMYLS GRWKDVSKVRKLMKEEKLGKLKDWSWI+IKEKVYSFKPNDKSH Q+AEMY LLE +LDEVK LGYEP +Y E IE
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EE+ EE VFSSTIYHSEKLAVAF LLNLPTATPIRVVKSITMCRDCHNFIRFISLL GREIVIRD KQLHKF NG CSC GFGDL+
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

A0A6J1GH28 putative pentatricopeptide repeat-containing protein At5g526303.1e-15996.85Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNE+IWSM+IAGCRSHGNSELGFY+
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AEQLLKLRPKD ETYVSLLNMY+SAGRWKDVSKVRKLM EEKLGKLKDWSWI+IKEKVYSFKPNDKSHHQT EMYELLETLLDEVKPLGYEP QYTEAIE
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

A0A6J1KHZ4 putative pentatricopeptide repeat-containing protein At5g526303.0e-15494.76Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGVEPNKITFVGVLSACSHGG VDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFE NEVIWSMIIAGCRSHGNSELGFYA
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        A+QLLKLRPKDTETYVSLLNMY+SAGRWKDVSKVRKLM EEKLGKLKDWSWITIKEKVYSFKP DKSH+QTAEMYELLETLLDEVKPLGYEP QY E  E
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EE GEET FSSTIYHSEKLAVAF LLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRD+KQLHKFSNGYCSCRGFGDLL
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

A0A6J1KJZ5 pentatricopeptide repeat-containing protein At4g21065-like8.4e-14990.56Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        MRLAGV+PN+ITFVGVLSACSH GLVDEALYYFEVMQKQ +IEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNE+IWSM+IAGCRSHGNSELGFYA
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AEQLLKLRPKDTE+Y+SLLNMY+SAGRWKDVS VRKLMKEEK+GKLKDWSWI+IKEKVYSFKPNDKSH QTAEMY+LLETLLDEVKPLGYEP QY E IE
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL
        EE G+ETVFSSTIYHSEKLAVAF LLNLP AT IRVVK+ITMCRDCHNFIRF+SLLTGREIVIRD KQLHKFSNGYCSC GFGDLL
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL

SwissProt top hitse value%identityAlignment
A8MQA3 Pentatricopeptide repeat-containing protein At4g210655.2e-6341.99Show/hide
Query:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL
        G+ P +ITFVG+L ACSH G+V E   YF  M+++YKIEP ++HF CM+D+  R G+V++A++ +K M  +PN VIW  ++  C  HG+S+L  +A  Q+
Subjt:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL

Query:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEP---GQYTEAIEE
        L+L P  +  YV L NMY S  RW DV K+RK M  + + K+   S + +  +V+ F   DKSH Q+  +Y  L+ +   ++  GY P     Y + +EE
Subjt:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEP---GQYTEAIEE

Query:  ENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
        E  E  V    +YHSEK+A+AF L++ P  +PI VVK++ +C DCH  I+ +S +  REIV+RD+ + H F NG CSC+ +
Subjt:  ENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

Q5G1T1 Pentatricopeptide repeat-containing protein At3g49170, chloroplastic8.0e-6440Show/hide
Query:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL
        GV+PN++T+V +LSACSH GLV E   +F  M + +KI+P M+H+ACM+D+  R G + +AF+ +  M F+ + ++W   +  CR H N+ELG  AA ++
Subjt:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL

Query:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQ--YTEAIEEE
        L+L P +   Y+ L N+Y  AG+W++ +++R+ MKE  L K    SWI + +K++ F   D +H    ++Y+ L+ L+ E+K  GY P        +EEE
Subjt:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQ--YTEAIEEE

Query:  NGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
        N E         HSEK+AVAF L++   + P+RV K++ +C DCHN +++IS ++GREIV+RD  + H F +G CSC  +
Subjt:  NGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

Q9FRI5 Pentatricopeptide repeat-containing protein At1g253606.8e-6341.43Show/hide
Query:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL
        G+ P++IT + VL+ACSH GLVD+   YF+ M+  Y+I P  DH+A +ID+  R G+  +A  V++ + F+P   IW  +++GCR HGN ELG  AA++L
Subjt:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL

Query:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQ--YTEAIEEE
          L P+   TY+ L NM+ + G+W++V++VRKLM++  + K    SWI ++ +V++F  +D SH +   +Y  L+ L  E++ LGY P        +E +
Subjt:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQ--YTEAIEEE

Query:  NGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
          +E + ++   HSEK+AVAF L+ LP  T IR+ K++  C DCHNF RF+S +  R+I++RD+K+ H F NG CSC  F
Subjt:  NGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

Q9LTF4 Putative pentatricopeptide repeat-containing protein At5g526304.4e-6240.64Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        M+L+G++PN ITF+ VL+ACSH GLVDE  YYF+ M K+ +IEP   H+A ++DM  R GR++EA +V+  M  +P E +W  ++  C  H N+EL  +A
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        A+++ +L P  +  ++SL N Y + GR++D +K RKL+++    K    SW+  + KV++F   ++ H ++ E+YE L  L +E++  GY     +  + 
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTI-YHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
        E +G+E   + TI YHSE+LA+AF L+  P   PIRV+K++ +C DCHN I+F+S+ T R I++RD  + H+F +G CSC  +
Subjt:  EENGEETVFSSTI-YHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

Q9SHZ8 Pentatricopeptide repeat-containing protein At2g220702.0e-6741.13Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        M + G+ P+ IT+VGV SAC+H GLV++   YF++M+   KI P + H+ACM+D++ R G ++EA + ++KM  EP+ V W  +++ CR H N +LG  A
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AE+LL L P+++  Y +L N+Y + G+W++ +K+RK MK+ ++ K + +SWI +K KV+ F   D +H +  E+Y  ++ + DE+K +GY P   T ++ 
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
         +  EE       +HSEKLA+AF L++ P  T +R++K++ +C DCH  I+FIS L GREI++RD  + H F +G+CSCR +
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

Arabidopsis top hitse value%identityAlignment
AT1G25360.1 Pentatricopeptide repeat (PPR) superfamily protein4.8e-6441.43Show/hide
Query:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL
        G+ P++IT + VL+ACSH GLVD+   YF+ M+  Y+I P  DH+A +ID+  R G+  +A  V++ + F+P   IW  +++GCR HGN ELG  AA++L
Subjt:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL

Query:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQ--YTEAIEEE
          L P+   TY+ L NM+ + G+W++V++VRKLM++  + K    SWI ++ +V++F  +D SH +   +Y  L+ L  E++ LGY P        +E +
Subjt:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQ--YTEAIEEE

Query:  NGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
          +E + ++   HSEK+AVAF L+ LP  T IR+ K++  C DCHNF RF+S +  R+I++RD+K+ H F NG CSC  F
Subjt:  NGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein1.5e-6841.13Show/hide
Query:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA
        M + G+ P+ IT+VGV SAC+H GLV++   YF++M+   KI P + H+ACM+D++ R G ++EA + ++KM  EP+ V W  +++ CR H N +LG  A
Subjt:  MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYA

Query:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE
        AE+LL L P+++  Y +L N+Y + G+W++ +K+RK MK+ ++ K + +SWI +K KV+ F   D +H +  E+Y  ++ + DE+K +GY P   T ++ 
Subjt:  AEQLLKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIE

Query:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
         +  EE       +HSEKLA+AF L++ P  T +R++K++ +C DCH  I+FIS L GREI++RD  + H F +G+CSCR +
Subjt:  EENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.7e-6540Show/hide
Query:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL
        GV+PN++T+V +LSACSH GLV E   +F  M + +KI+P M+H+ACM+D+  R G + +AF+ +  M F+ + ++W   +  CR H N+ELG  AA ++
Subjt:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL

Query:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQ--YTEAIEEE
        L+L P +   Y+ L N+Y  AG+W++ +++R+ MKE  L K    SWI + +K++ F   D +H    ++Y+ L+ L+ E+K  GY P        +EEE
Subjt:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQ--YTEAIEEE

Query:  NGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
        N E         HSEK+AVAF L++   + P+RV K++ +C DCHN +++IS ++GREIV+RD  + H F +G CSC  +
Subjt:  NGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.7e-6441.99Show/hide
Query:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL
        G+ P +ITFVG+L ACSH G+V E   YF  M+++YKIEP ++HF CM+D+  R G+V++A++ +K M  +PN VIW  ++  C  HG+S+L  +A  Q+
Subjt:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL

Query:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEP---GQYTEAIEE
        L+L P  +  YV L NMY S  RW DV K+RK M  + + K+   S + +  +V+ F   DKSH Q+  +Y  L+ +   ++  GY P     Y + +EE
Subjt:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEP---GQYTEAIEE

Query:  ENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
        E  E  V    +YHSEK+A+AF L++ P  +PI VVK++ +C DCH  I+ +S +  REIV+RD+ + H F NG CSC+ +
Subjt:  ENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF

AT4G21065.2 Tetratricopeptide repeat (TPR)-like superfamily protein3.7e-6441.99Show/hide
Query:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL
        G+ P +ITFVG+L ACSH G+V E   YF  M+++YKIEP ++HF CM+D+  R G+V++A++ +K M  +PN VIW  ++  C  HG+S+L  +A  Q+
Subjt:  GVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQL

Query:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEP---GQYTEAIEE
        L+L P  +  YV L NMY S  RW DV K+RK M  + + K+   S + +  +V+ F   DKSH Q+  +Y  L+ +   ++  GY P     Y + +EE
Subjt:  LKLRPKDTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEP---GQYTEAIEE

Query:  ENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF
        E  E  V    +YHSEK+A+AF L++ P  +PI VVK++ +C DCH  I+ +S +  REIV+RD+ + H F NG CSC+ +
Subjt:  ENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACTGGCTGGAGTTGAACCAAACAAGATCACTTTTGTGGGTGTTCTATCAGCTTGTAGCCATGGTGGTTTGGTGGATGAAGCACTGTATTACTTTGAAGTAATGCA
GAAGCAGTACAAGATTGAGCCTGTAATGGACCATTTTGCATGCATGATTGACATGTATATGAGGTTGGGTCGGGTGGAAGAAGCTTTTGATGTAGTCAAGAAGATGAACT
TTGAGCCTAATGAAGTTATATGGTCCATGATAATTGCAGGATGTCGAAGTCACGGGAACTCCGAATTGGGGTTTTACGCTGCCGAGCAGTTACTCAAACTCAGGCCGAAA
GACACGGAGACCTATGTCTCTCTGTTAAATATGTACCTCTCTGCAGGGAGATGGAAGGATGTTTCCAAAGTGAGGAAATTAATGAAAGAAGAAAAGCTTGGAAAGTTGAA
GGACTGGAGCTGGATTACCATCAAAGAAAAAGTTTATTCATTTAAACCCAATGACAAATCACACCATCAAACTGCAGAGATGTACGAGCTGTTGGAGACTTTACTCGACG
AAGTAAAACCTCTTGGTTACGAGCCTGGTCAATATACAGAGGCAATCGAAGAGGAGAACGGCGAGGAAACAGTGTTCTCGTCCACCATTTATCACAGCGAAAAGTTAGCT
GTTGCTTTTAGTTTGTTAAACCTGCCAACAGCTACCCCGATTCGGGTTGTCAAGAGCATCACCATGTGTAGGGATTGCCATAATTTTATCCGATTCATTTCATTATTGAC
AGGCAGGGAAATCGTTATCCGAGATAAAAAGCAGCTTCACAAGTTTTCGAACGGATACTGTTCTTGTAGAGGTTTCGGAGATCTTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACTGGCTGGAGTTGAACCAAACAAGATCACTTTTGTGGGTGTTCTATCAGCTTGTAGCCATGGTGGTTTGGTGGATGAAGCACTGTATTACTTTGAAGTAATGCA
GAAGCAGTACAAGATTGAGCCTGTAATGGACCATTTTGCATGCATGATTGACATGTATATGAGGTTGGGTCGGGTGGAAGAAGCTTTTGATGTAGTCAAGAAGATGAACT
TTGAGCCTAATGAAGTTATATGGTCCATGATAATTGCAGGATGTCGAAGTCACGGGAACTCCGAATTGGGGTTTTACGCTGCCGAGCAGTTACTCAAACTCAGGCCGAAA
GACACGGAGACCTATGTCTCTCTGTTAAATATGTACCTCTCTGCAGGGAGATGGAAGGATGTTTCCAAAGTGAGGAAATTAATGAAAGAAGAAAAGCTTGGAAAGTTGAA
GGACTGGAGCTGGATTACCATCAAAGAAAAAGTTTATTCATTTAAACCCAATGACAAATCACACCATCAAACTGCAGAGATGTACGAGCTGTTGGAGACTTTACTCGACG
AAGTAAAACCTCTTGGTTACGAGCCTGGTCAATATACAGAGGCAATCGAAGAGGAGAACGGCGAGGAAACAGTGTTCTCGTCCACCATTTATCACAGCGAAAAGTTAGCT
GTTGCTTTTAGTTTGTTAAACCTGCCAACAGCTACCCCGATTCGGGTTGTCAAGAGCATCACCATGTGTAGGGATTGCCATAATTTTATCCGATTCATTTCATTATTGAC
AGGCAGGGAAATCGTTATCCGAGATAAAAAGCAGCTTCACAAGTTTTCGAACGGATACTGTTCTTGTAGAGGTTTCGGAGATCTTCTCTAA
Protein sequenceShow/hide protein sequence
MRLAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQLLKLRPK
DTETYVSLLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLLDEVKPLGYEPGQYTEAIEEENGEETVFSSTIYHSEKLA
VAFSLLNLPTATPIRVVKSITMCRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL