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Carg20525 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20525
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin-responsive protein
Genome locationCarg_Chr12:919492..921519
RNA-Seq ExpressionCarg20525
SyntenyCarg20525
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020229.1 Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-30100Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

XP_022951336.1 auxin-responsive protein IAA9-like [Cucurbita moschata]2.9e-30100Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

XP_023002083.1 auxin-responsive protein IAA9-like [Cucurbita maxima]2.9e-30100Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

XP_023537439.1 auxin-responsive protein IAA9-like [Cucurbita pepo subsp. pepo]2.9e-30100Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

XP_038884596.1 auxin-responsive protein IAA8-like [Benincasa hispida]2.5e-2998.48Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        MSESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

TrEMBL top hitse value%identityAlignment
A0A6J1GHF6 Auxin-responsive protein1.4e-30100Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

A0A6J1HBE4 Auxin-responsive protein1.2e-2998.48Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        MSESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

A0A6J1HD78 Auxin-responsive protein1.2e-2998.48Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        MSESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

A0A6J1KMY6 Auxin-responsive protein1.4e-30100Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

Q9SSY2 Auxin-responsive protein1.2e-2998.48Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        MSESKLKDLLHGSEYVLTYEDKD DWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

SwissProt top hitse value%identityAlignment
O24407 Auxin-responsive protein IAA165.4e-2781.82Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        M+ESKL DLL+GS+YV TYEDKD DWMLVGDVPWEMF+DSCKR+RIMK S+AIGLAPRA+EKC+NR
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

P0C132 Auxin-responsive protein IAA304.1e-2781.82Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        M+ESK+ DLL+GSEYV TYEDKD DWMLVGDVPWEMF++SCKRLRIMK S+AIGLAPRA+EKC+NR
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

Q38825 Auxin-responsive protein IAA74.2e-2476.12Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEK-CRNR
        M+ESKL +LL+ SEYV +YEDKD DWMLVGDVPWEMF++SCKRLRIMK S+A+GLAPRA+EK C+NR
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEK-CRNR

Q38826 Auxin-responsive protein IAA81.5e-2474.63Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSE KLKDLLHGSE+VLTYEDKD DWMLVGDVPWE+F ++C++L+IMK SD+IGLAP AVEK +N++
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

Q9ZSY8 Auxin-responsive protein IAA274.5e-2680.3Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        ++ES+L DLL GSEYV+TYEDKD+DWMLVGDVPWEMFI SCK+LRIMKSS+AIGLAPR +EKCR+R
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

Arabidopsis top hitse value%identityAlignment
AT2G22670.1 indoleacetic acid-induced protein 81.0e-2574.63Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSE KLKDLLHGSE+VLTYEDKD DWMLVGDVPWE+F ++C++L+IMK SD+IGLAP AVEK +N++
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

AT2G22670.3 indoleacetic acid-induced protein 81.0e-2574.63Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
        MSE KLKDLLHGSE+VLTYEDKD DWMLVGDVPWE+F ++C++L+IMK SD+IGLAP AVEK +N++
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK

AT3G04730.1 indoleacetic acid-induced protein 163.8e-2881.82Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        M+ESKL DLL+GS+YV TYEDKD DWMLVGDVPWEMF+DSCKR+RIMK S+AIGLAPRA+EKC+NR
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

AT4G29080.1 phytochrome-associated protein 23.2e-2780.3Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        ++ES+L DLL GSEYV+TYEDKD+DWMLVGDVPWEMFI SCK+LRIMKSS+AIGLAPR +EKCR+R
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR

AT5G65670.2 indole-3-acetic acid inducible 97.9e-2677.27Show/hide
Query:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR
        +SE+KLKDLL+G +YVLTYEDKD DWMLVGDVPWEMFID CK+L+IMK  DAIGLAPRA+EK + R
Subjt:  MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAGAGCAAGCTGAAAGATCTTCTTCATGGCTCAGAATATGTTCTAACATACGAAGATAAAGATGCTGACTGGATGCTCGTTGGTGATGTCCCCTGGGAGATGTT
CATCGACTCTTGTAAGAGGCTGAGGATTATGAAGAGCTCAGATGCAATTGGACTGGCTCCTAGGGCGGTGGAGAAGTGCCGGAACAGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAGAGCAAGCTGAAAGATCTTCTTCATGGCTCAGAATATGTTCTAACATACGAAGATAAAGATGCTGACTGGATGCTCGTTGGTGATGTCCCCTGGGAGATGTT
CATCGACTCTTGTAAGAGGCTGAGGATTATGAAGAGCTCAGATGCAATTGGACTGGCTCCTAGGGCGGTGGAGAAGTGCCGGAACAGGAAATAGCTAAGCACTATGCCAT
GGTTGATGCTGTCCATCCAAATGTTGGAATAAGATAGATCTGAAACTAAAAAAAACGTCATATGTGGCTCTGGAAGGTGGTTCCAAGAATGATGGAGTGTTGGATGGGAT
AGGTTCTTGTGTGCTTCCTCTGTTACATTATGTTTTTATAATTATGTTTATGTTACTTTGGTGATGTCTAAGCAGTTTCCCTAGTTTGTGAATTGAAGTACTTAAAAACT
ATTTAAGAGCAAGTCTGCAGATCTGTGGGCAAGTTCCTGTTCCTCATTTGCAGGACTCTCAAAAAGTTTGTAAAGTTATTGGTTATCAAACTGTGTTGCTTGAATGCTCT
GTTGTAAACTTTCTTCTCTTTGACTTGATTCCTTCAAATCCTACTACTACTACCTGAATGTTCTTCTAGTTTTACCAAATACATTTTTTC
Protein sequenceShow/hide protein sequence
MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK