; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg20536 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg20536
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein 38-like
Genome locationCarg_Chr12:860914..861807
RNA-Seq ExpressionCarg20536
SyntenyCarg20536
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585298.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-7264.34Show/hide
Query:  GGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWPALIQIRLSVEDEQTVTSPSSVR
        GGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFV                                                 T   P S R
Subjt:  GGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWPALIQIRLSVEDEQTVTSPSSVR

Query:  LVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGYGYGIGYGHGYGYGHGYGYGYDC
        +    P            R  + NI +          GRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGYGYGIGYGHGYGYGHGYGYGYDC
Subjt:  LVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGYGYGIGYGHGYGYGHGYGYGYDC

Query:  SSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG
        SSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG
Subjt:  SSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG

KAG7020218.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-148100Show/hide
Query:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP
        MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP
Subjt:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP

Query:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGYGYGIGYG
        ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGYGYGIGYG
Subjt:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGYGYGIGYG

Query:  HGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTGNYLSFY
        HGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTGNYLSFY
Subjt:  HGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTGNYLSFY

XP_022951640.1 RNA-binding protein 38-like [Cucurbita moschata]2.3e-8667.04Show/hide
Query:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP
        MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFV                                    
Subjt:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP

Query:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY
                     T   P S R+    P            R  + NI +          GRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY
Subjt:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY

Query:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMN-QGLFYSPMHQIITPSTG
        GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMN QGLFYSPMHQIITPSTG
Subjt:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMN-QGLFYSPMHQIITPSTG

XP_023002673.1 RNA-binding protein 38-like [Cucurbita maxima]9.6e-8565.41Show/hide
Query:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP
        MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDK TGKSKGYGFV                                    
Subjt:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP

Query:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY
                     T   P S R+    P            R  + NI +          GRIQ+TASYGG+RPSFPPPPVIFPPYRYRSYAPNYTVPYGY
Subjt:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY

Query:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG
        GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYS MHQII PSTG
Subjt:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG

XP_023538118.1 RNA-binding protein 38-like [Cucurbita pepo subsp. pepo]9.3e-8867.29Show/hide
Query:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP
        MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFV                                    
Subjt:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP

Query:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY
                     T   P S R+    P            R  + NI +          GRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY
Subjt:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY

Query:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG
        GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG
Subjt:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG

TrEMBL top hitse value%identityAlignment
A0A0A0LLP2 RRM domain-containing protein9.5e-3843.3Show/hide
Query:  MADH----FSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNR
        MAD+     ++PPP  GDTTWTK+FVGGLAWET+S EMH FFQQFG+ILEAVII+DK TGKSKGYGFV+           D  SA               
Subjt:  MADH----FSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNR

Query:  REWPALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTA-----SYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPY
                        +   +P+ +   RR          P    L   +   +  G +Q+TA     SYGGLRP FPPPP+IFP YRYRSYAPNYTVPY
Subjt:  REWPALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTA-----SYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPY

Query:  G-------------YGYGIGYGHGYGYGHGYGYGYDCS-SSSPAPRAPFS----SPSSAAAPYVPYYMN------QGLFYSPMHQIITPST
                      Y             + Y YGY  S SSS  PRA FS     P S +  Y PYY N      QGL Y+PM QIITPST
Subjt:  G-------------YGYGIGYGHGYGYGHGYGYGYDCS-SSSPAPRAPFS----SPSSAAAPYVPYYMN------QGLFYSPMHQIITPST

A0A6J1GJE8 RNA-binding protein 38-like1.1e-8667.04Show/hide
Query:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP
        MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFV                                    
Subjt:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP

Query:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY
                     T   P S R+    P            R  + NI +          GRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY
Subjt:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY

Query:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMN-QGLFYSPMHQIITPSTG
        GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMN QGLFYSPMHQIITPSTG
Subjt:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMN-QGLFYSPMHQIITPSTG

A0A6J1HBJ1 RNA-binding protein 38-like isoform X21.7e-3941.47Show/hide
Query:  MADHFSNP-PPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREW
        MA++FSN  PP FGDTTWTK+FVGGLAWET+SDEM  FFQQFGEILEAVII+DK TGKSKGYGFV+          +    +           I  RR  
Subjt:  MADHFSNP-PPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREW

Query:  PALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTA----SYGGLRPSFPPPP------VIFPPYRYRSYAPNYTV
                         + +     R RP     + L   +++          G +QTT+    SYGGL   +PPPP      ++FP YRYRSYAPNYT+
Subjt:  PALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTA----SYGGLRPSFPPPP------VIFPPYRYRSYAPNYTV

Query:  PY-------------GYGYGIGYGHG-----------YGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYY-----MNQGLFYSPMHQIITPSTG
        PY              YGYG GY              +GYGHG+G+G+D            SSP S++  Y PYY     M Q LFY+ MHQI TP+TG
Subjt:  PY-------------GYGYGIGYGHG-----------YGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYY-----MNQGLFYSPMHQIITPSTG

A0A6J1HBU2 RNA-binding protein 38-like isoform X11.9e-3840.26Show/hide
Query:  MADHFSNP-PPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREW
        MA++FSN  PP FGDTTWTK+FVGGLAWET+SDEM  FFQQFGEILEAVII+DK TGKSKGYGFV+          +    +           I  RR  
Subjt:  MADHFSNP-PPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREW

Query:  PALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTA----SYGGLRPSFPPPP------VIFPPYRYRSYAPNYTV
                         + +     R RP     + L   +++          G +QTT+    SYGGL   +PPPP      ++FP YRYRSYAPNYT+
Subjt:  PALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTA----SYGGLRPSFPPPP------VIFPPYRYRSYAPNYTV

Query:  PY----------------------GYGYGIGYGHG-----------YGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYY-----MNQGLFYSPMH
        PY                       YGYG GY              +GYGHG+G+G+D            SSP S++  Y PYY     M Q LFY+ MH
Subjt:  PY----------------------GYGYGIGYGHG-----------YGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYY-----MNQGLFYSPMH

Query:  QIITPSTG
        QI TP+TG
Subjt:  QIITPSTG

A0A6J1KU92 RNA-binding protein 38-like4.7e-8565.41Show/hide
Query:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP
        MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDK TGKSKGYGFV                                    
Subjt:  MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWP

Query:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY
                     T   P S R+    P            R  + NI +          GRIQ+TASYGG+RPSFPPPPVIFPPYRYRSYAPNYTVPYGY
Subjt:  ALIQIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILL-------DFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGY

Query:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG
        GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYS MHQII PSTG
Subjt:  GYGIGYGHGYGYGHGYGYGYDCSSSSPAPRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTG

SwissProt top hitse value%identityAlignment
Q6GQD3 RNA-binding protein 24-A3.3e-1155.77Show/hide
Query:  DTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        DTT+TK+FVGGL + T    + ++F+ FG+I EAV+I D+ TGKS+GYGFV+
Subjt:  DTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS

Q76LC6 RNA-binding protein 241.5e-1157.69Show/hide
Query:  DTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        DTT+TK+FVGGL + T    + ++F+ FGEI EAV+I D+ TGKS+GYGFV+
Subjt:  DTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS

Q9BX46 RNA-binding protein 242.5e-1157.69Show/hide
Query:  DTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        DTT+TK+FVGGL + T    + ++F+ FGEI EAV+I D+ TGKS+GYGFV+
Subjt:  DTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS

Q9I8B3 RNA-binding protein 24-B3.3e-1155.77Show/hide
Query:  DTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        DTT+TK+FVGGL + T    + ++F+ FG+I EAV+I D+ TGKS+GYGFV+
Subjt:  DTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS

Q9M1S3 Probable RNA-binding protein ARP14.6e-1364.81Show/hide
Query:  FGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        FGDT  TKVFVGGLAW+T  + M+  F ++G+ILEAVII DK T +SKGYGFV+
Subjt:  FGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS

Arabidopsis top hitse value%identityAlignment
AT1G20880.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-1533.2Show/hide
Query:  HFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWPALI
        H+ N P  FGDTT+TKVFVGGLAWET+S+ + R F Q+G+ILEAV+I DK TG+SKGYGFV+          +    A     +     I  RR    L 
Subjt:  HFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWPALI

Query:  QIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTASYG-GLRPSFP-----PPPVIFPPYRYRSYAPNYTVP-----YG
         +  S    Q    P +   VR        +  P      S       T   Q    Y  G+ P  P          + PY  + Y   Y VP      G
Subjt:  QIRLSVEDEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTASYG-GLRPSFP-----PPPVIFPPYRYRSYAPNYTVP-----YG

Query:  YGYG---------IGYGHGYGYGHGYGYGYDCSSSSP--APRAPFSSPSS
        Y YG          GY  G GY H   +     ++SP  A ++P+ SPS+
Subjt:  YGYG---------IGYGHGYGYGHGYGYGYDCSSSSP--APRAPFSSPSS

AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-2083.33Show/hide
Query:  FGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        FGDTT TKVFVGGLAWET +DEM R+F QFGEILEAVII DK TGKSKGYGFV+
Subjt:  FGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS

AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-1967.74Show/hide
Query:  HFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        H+ N P  FGDTT+TKVFVGGLAWET+S+ + + F+Q+GEILEAV+I DK TG+SKGYGFV+
Subjt:  HFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS

AT1G78260.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.7e-2183.33Show/hide
Query:  FGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        FGDTT+TKVFVGGLAWET +DEM R+F+QFGEILEAVII DK TGKSKGYGFV+
Subjt:  FGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS

AT1G78260.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.7e-2183.33Show/hide
Query:  FGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS
        FGDTT+TKVFVGGLAWET +DEM R+F+QFGEILEAVII DK TGKSKGYGFV+
Subjt:  FGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATCATTTCTCCAATCCCCCGCCGCTCTTCGGCGACACCACATGGACCAAAGTCTTCGTCGGCGGCCTCGCTTGGGAGACCAAATCCGACGAAATGCACAGATT
CTTCCAACAGTTCGGCGAGATTCTCGAAGCCGTCATAATCAAAGATAAAACCACCGGAAAATCCAAAGGCTACGGATTCGTAAGTTCCTTATTCCTCTCCGATTCCATTT
CCGGTTACGATTTTAATTCCGCCGTCTCCGATTTTGTAATTAGGTCACTTTCCGAGATCCTCAATCGGCGAGAATGGCCTGCGCTAATCCAAATCCGATTATCTGTGGAA
GACGAGCAAACTGTAACATCGCCGTCTTCGGTCCGCCTCGTCCGCCGCCGTCCGGAGGTAACTTTCTTAATCTCATTACCGGAAAACGATCGATTGATTTCTGTTAACAT
TCTTCTCGATTTTACAGGGAGAATCCAAACTACAGCGTCGTACGGCGGGTTACGGCCGTCGTTTCCGCCGCCGCCGGTCATTTTCCCGCCATACAGATACCGATCCTACG
CCCCAAATTACACAGTACCTTATGGCTATGGCTATGGCATTGGATACGGCCATGGCTATGGCTATGGTCATGGCTATGGCTATGGCTATGACTGTTCTTCATCATCACCG
GCTCCAAGAGCGCCATTTTCATCACCATCATCAGCGGCAGCACCCTATGTTCCGTACTATATGAATCAGGGGTTGTTCTACTCTCCGATGCACCAGATTATTACTCCCAG
TACTGGTAATTATTTATCGTTCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATCATTTCTCCAATCCCCCGCCGCTCTTCGGCGACACCACATGGACCAAAGTCTTCGTCGGCGGCCTCGCTTGGGAGACCAAATCCGACGAAATGCACAGATT
CTTCCAACAGTTCGGCGAGATTCTCGAAGCCGTCATAATCAAAGATAAAACCACCGGAAAATCCAAAGGCTACGGATTCGTAAGTTCCTTATTCCTCTCCGATTCCATTT
CCGGTTACGATTTTAATTCCGCCGTCTCCGATTTTGTAATTAGGTCACTTTCCGAGATCCTCAATCGGCGAGAATGGCCTGCGCTAATCCAAATCCGATTATCTGTGGAA
GACGAGCAAACTGTAACATCGCCGTCTTCGGTCCGCCTCGTCCGCCGCCGTCCGGAGGTAACTTTCTTAATCTCATTACCGGAAAACGATCGATTGATTTCTGTTAACAT
TCTTCTCGATTTTACAGGGAGAATCCAAACTACAGCGTCGTACGGCGGGTTACGGCCGTCGTTTCCGCCGCCGCCGGTCATTTTCCCGCCATACAGATACCGATCCTACG
CCCCAAATTACACAGTACCTTATGGCTATGGCTATGGCATTGGATACGGCCATGGCTATGGCTATGGTCATGGCTATGGCTATGGCTATGACTGTTCTTCATCATCACCG
GCTCCAAGAGCGCCATTTTCATCACCATCATCAGCGGCAGCACCCTATGTTCCGTACTATATGAATCAGGGGTTGTTCTACTCTCCGATGCACCAGATTATTACTCCCAG
TACTGGTAATTATTTATCGTTCTATTAA
Protein sequenceShow/hide protein sequence
MADHFSNPPPLFGDTTWTKVFVGGLAWETKSDEMHRFFQQFGEILEAVIIKDKTTGKSKGYGFVSSLFLSDSISGYDFNSAVSDFVIRSLSEILNRREWPALIQIRLSVE
DEQTVTSPSSVRLVRRRPEVTFLISLPENDRLISVNILLDFTGRIQTTASYGGLRPSFPPPPVIFPPYRYRSYAPNYTVPYGYGYGIGYGHGYGYGHGYGYGYDCSSSSP
APRAPFSSPSSAAAPYVPYYMNQGLFYSPMHQIITPSTGNYLSFY